|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 1642 | HQ3211A | VNG0170 | hla0393 | Hmu0294 | HVO_2592 | rrnAC2450 | Hbo2258 |
982 | HQ3211A | 1641 | 454 | 954 | 826 | 870 | 902 | 856 |
643 | VNG0170 | 454 | 929 | 560 | 560 | 540 | 546 | 514 |
1229 | hla0393 | 954 | 560 | 1701 | 1051 | 1090 | 1099 | 1059 |
1288 | Hmu0294 | 826 | 560 | 1051 | 1699 | 1157 | 1204 | 1200 |
1332 | HVO_2592 | 870 | 540 | 1090 | 1157 | 1620 | 1233 | 1220 |
1432 | rrnAC2450 | 902 | 546 | 1099 | 1204 | 1233 | 1628 | 1376 |
1374 | Hbo2258 | 856 | 514 | 1059 | 1200 | 1220 | 1376 | 1672 |
227 symbols consensus MS-TD-AD-----AAESITVYSDYVCPFCYLGRESLRQYQETREDELEIDWHPFDLRSQK #oth 123242222122254351322111111111111322332143122415221211111332 HQ3211A --:--:--:::::M::::L::::::::::::::RA:ST::TE:::S:Q:E:::::::A:Q VNG0170 --:--:--:::::----------------------------------------------- hla0393 ::N::A::APTPD:T::::I:::::::::::::Q:FAR::::::EP:A:::::::::AG: Hmu0294 :TD::A::RPESPTTDE:A:::::::::::::::::::F:AD:DEQ:R:::R:::::HN: HVO_2592 --:-MSS:::::::DQA::::::::::::::::Q::S::::::DE::D:::::::::::: rrnAC2450 ::E:Q:--:::::SS:R:::F:::::::::::::::::::S:::::::V:::::::::G: Hbo2258 ::DSES:E:::::Y::Q::::::::::::::::::::R::S::::::::::::::::::: consensus RNPDGSIDHSVDDGKDDEYYEQAKENVRRLQEKYDV-EMDLDLATDVDSLPAQIASYYVK #oth 14211311332222122311211223111113412211.42124211.122..31.2222 HQ3211A :HA::::::DAANQ:GEQ::Q::R:::::::DQ::AT::CQE:::::::R:::LV:VNIQ VNG0170 ------------------------------------:-:ST::VG:::GFR::V::L::: hla0393 :G:::E::DTA:::::E::::::R:::::::::::A:::AQE:R::::::::::V:VH:R Hmu0294 :::::::::::::::::D:::::::S:::::AE:G::::S::::SE::::S::::::H:: HVO_2592 :R::::::F:::::::ED::::::QG::::::R::::::T:::G::::::::::V:::L: rrnAC2450 :::::::::::::::::::::::::S:::::A::::::::::I:::I::::::::::::: Hbo2258 :::::T::::::::::::::::::::::::::::G:::::::VD::I::::::M:::::: consensus --EHADYETWLAFDEAVFAALWQDGRDIGDEDVLADLAE--DV-GLDGDEIRSALDDEAL #oth 114222112..1..22113...2123.1.1421.221.311311121212133212.322 HQ3211A QADAYS:DS:::::T::L::::E:D::::ETA::I:I:SEI:::DI:T:W:ETI:S:KDR VNG0170 :::TFP-:Q::::::G::::::A:D::V::A:::::I:D::G::::::E:::TVV::::W hla0393 :::T:P-:S:::::::I:::::::::::::RE::::I:A::::D:::PEIVDE::A:DD: Hmu0294 ::TT:::::::D::TSI:T::::EE:::::P::::::::::RA:::::::V:A:::::T: HVO_2592 ::G::::::::::::S::E::::::K:::::A::VE:::::S:::I::E:VA::::::T: rrnAC2450 ::::Y:::::::::V:::E::::::Q::::::L:VE::::::A::V:::::::::A:G:: Hbo2258 ::Q:Y::::::D::V:I:D::::::A:::::EL:VK::::::A::VV::::::::::D:: consensus RDEVRERFTAAQRAGITGVPTFAY--DGHAARGAVPPEQLERLVEGV #oth 1321234.32.334.1......11111.21.......21.1..1223 HQ3211A Y:ALD:Q:R:::N:::::::::VNKT::N::::::::A::R::MDN- VNG0170 ::RL:DE:AD:RE:::::::::V::::::G:::::::S::::::::: hla0393 ::R:TDL::::RER:V::::::::::::::::::::::::::::GD: Hmu0294 :E::TT:::E:::E::::::::V:::::Y:::::::::::::::D:T HVO_2592 :A::::::SE::QH:V::::::::::E:Y:::::::::::::::::: rrnAC2450 :S::::N::::K:Q::::::::::::::::::::::::::::::::S Hbo2258 :E:::AQ::E:HQQ:V::::::::::::YG::::::::H::::::::