| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 3107 | rrnAC2547 | Hmu1425 | VNG0447 | HQ2411A | hla1951 | HVO_1491 | Hbo0057 |
| 2209 | rrnAC2547 | 3139 | 2043 | 1782 | 1798 | 1876 | 1845 | 1911 |
| 2312 | Hmu1425 | 2043 | 3167 | 1837 | 1936 | 2020 | 1873 | 1995 |
| 2222 | VNG0447 | 1782 | 1837 | 3003 | 1841 | 1891 | 1870 | 1938 |
| 2338 | HQ2411A | 1798 | 1936 | 1841 | 3647 | 1971 | 1911 | 2182 |
| 2398 | hla1951 | 1876 | 2020 | 1891 | 1971 | 3262 | 1939 | 2132 |
| 2299 | HVO_1491 | 1845 | 1873 | 1870 | 1911 | 1939 | 3070 | 2131 |
| 2527 | Hbo0057 | 1911 | 1995 | 1938 | 2182 | 2132 | 2131 | 3124 |
491 symbols consensus MERYDRLYRLYDEFDTDTLRAYQEFVDLFPPVDSRVALEHWEDASDELAARKDEIRDAFP #oth .321.2..2..33122321.34.311..2..12.21..32.131321.344.23.14223 rrnAC2547 ::Q::Q:::::KSV::T:::G::::::::::LS:T::::Q::T:::R:D:L:AD:T:E:: Hmu1425 :KQ:::::::::D:::AS::::::::::::::::::::D::Q::::::DE::R:::E:Y: VNG0447 :QLH::::T:::::::ES:::H::::::A:::::P:::QY::S:::::::H:::::A::: HQ2411A :D::::::A::EN:P:::::DR:N:I:::::::::::::Y::::YN::Q:Q::::::::V hla1951 :::H:L:::::::::VE:::E::SL:::::::::::::::::::GE:::RL:R:::E:L: HVO_1491 :::::L:::::GN::A:AV:DA:D::::L::LG:P:::S::QQVD::::GK::R::R:LS Hbo0057 :::::L:::::E::EA::::EL:D:::::::::::I::DY:Q::::::ES:::A::SS:A consensus -AGD-----------------------------TFAEIAARATRDQAFTALDLYSKYGRA #oth 23221111111111111111111111111111122.22.1221.121......342.2.3 rrnAC2547 GT:E::::::::::::::::::::::::::::::Y::::::L:::E:::::::::::D:S Hmu1425 TT:E:::::::::::::::::::::::::::::RY:A:::YLD::::::::::ATE:::P VNG0447 ::H::::::::::::::::::::::::::::::A::DV::::::::::::::::G::::: HQ2411A :NK:GHERETTIDQEGSYSTSITTAENEAVEPE:M:A::SQ:::E::::::::CM::Q:R hla1951 :::A:::::::::::::::::::::::::::::::::V::Y:D:EA:::::::HAR:D:: HVO_1491 :D:::::::::::::::::::::::::::::::RY::L::::::::::::::::T::::: Hbo0057 :::::::::::::::::::::::::::::::::A:::::::S::::T::::::H:::::: consensus VNALVLDVDETLRSAGGTDNEIPRETLHLLTEFHEAGVPIVICTGQTLENVKGFAIQGLG #oth 1.1.............5.......21.12.122.12.1..11............31.... rrnAC2547 ::V:::::::::::::D:::::::D::Y:::Q:::::I:::V::::::::::::M::::: Hmu1425 I:::::::::::::::T:::::::::::::DLL::D:I:::V::::::::::::L::::: VNG0447 ::V:::::::::::::S:::::::A:::::::::::::::::::::::::::::LS:::: HQ2411A I:::::::::::::::::::::::::::H:::I::R:I::I::::::::::::::::::: hla1951 ::::::::::::::::::::::::::::M:::L:D:::::::::::::::::::M::::: HVO_1491 ::::::::::::::::Q::::::::V:::::Q:::R:::::::::::::::::::::::: Hbo0057 ::::::::::::::::R:::::::D:::::::::::::::::::::::::::::T::::: consensus NELVHSGDVSIVYEAGTGVFTPGHGSDTKRLLYEDLDDAVRGVFDTVRSRVLPDAPDAIR #oth 121.1..34.1...1.1....12..23..2...14.1441341.45..2.12431.1323 rrnAC2547 :D::S::QM:::::S:N:::::K::E::::::::R::G::VD::E:::R:::SE::::VG Hmu1425 :AF:::::::::::S:N:::::R:::Q:::::::S::ESITN::::::::I:A::::::A VNG0447 :::::::RL:V::::::::::::::A::::::::::G:D::::::D:::::HTA::ED:: HQ2411A S:::::::I::::::::::::::::::::::::AE::SEIQSI:TQ:::::::E::ET:Q hla1951 :::::::RF:::::::N::::A::::R::C:::::::E::::::GA::::::::::ENV: HVO_1491 :::::::N::::::::::::::::::::::::::T:::S:QS::ES::G::IR:L:::L: Hbo0057 ::::::::::::::::::::::::::T::Q:::::::PT::E::SE:::::::Q:::DL: consensus RGCHLQGNEFNVTLKPNFETGSDDAEEVIDEGLVYLLDLLGDAVAAAVDAD--------- #oth 422........1.....213.235.232..32.31.31.112423342133111111111 rrnAC2547 KR:::::::::::::::A:V:::N:V:I:::S:C::CG:V:::I::Q:::E::::::::: Hmu1425 :::::::::::::::::A:N:TRK:V:I::D::L:::::::ET::SE::::::::::::: VNG0447 :::::::::::::::::Y::::ER:RGL::SA::H::G::A:C:G:DPA:V::::::::: HQ2411A QSA::::::::I:::::Y:::::A::T::::::C::V:::::I:TT:::I:DETVVSIRN hla1951 :::::::::::::::::::::GA:::A:::D::IH:I::::EV:VDRIAE:::::::::: HVO_1491 G:V:::::::::::::::::::::::::::GA:::::::::E:LTDDPAGS::::::::: Hbo0057 ESV::::::::I::::::DI:::P::A:::::::::V::::R:::::::G:::::::::: consensus -----------------------------VD-GADWARAYYAAADPEIADVLEA---ADA #oth 1111111111113221122222222221232533522..11132...123.222111434 rrnAC2547 :::::::::::::::::::::::::::::::DP:GY::::FS-R::::L::::::::-GG Hmu1425 :::::::::::::::::::::::::::::::EPG::::::::-S::::RA:I:D::::GE VNG0447 :::::::::::::::::::::::::::::--:-----:::::D::::::A:VA::::-SS HQ2411A DMTADVDISSVSDGASDDNIASRVQTEDIY:I::L:::::::S::::::T:::D:::::: hla1951 ::::::::::::LDPSDFDTEGDATNADLA:R::A::::H::::::::RE:I::TAVDNP HVO_1491 :::::::::::::::::::::::::::::--:--::::::F::R::::R:::DT:::R:: Hbo0057 ::::::::::::FG::::::::::::::::ESAEH:S:::::D::::V::::A::::E:: consensus APDADAD-DIPEAVADLFDRIDVGYYEADAAEIGSLELDKPAGVQAALDVLGVDDPFALV #oth 3336342234232425312.1121..21....13121.1.33..22.1...113...2.1 rrnAC2547 L:THADIE:A:::FR:ILE:V:L::::G::::LV::::::S:::EE:F::::I::::::: Hmu1425 GQE:SP::EM:P:LRS::::::L::::G:::::V::::::::::R::F:::DI::::::: VNG0447 :AVG::::ALG::A:ETLS::::::::G:::::A:R::N:VV:::::::::::A:::::: HQ2411A ::TI:P::S::TS:RTR:::::IA::H:::::::::D::::T:::G:::::DIE:::V:I hla1951 ID:PAEIE:V::P::A::::::::::R::::::S::::::V:::E::::::D:R:::L:: HVO_1491 L::S::ESE:LDP::QTLE:VT:A::H:::::LSAVD:N:A:::R::::::::::::V:: Hbo0057 ::ECEV:::V:DPII::::::::A::H:::::::::::N::N:::::::::::::::V:: consensus MGDSKSDLRVMEWAAEHDAGIAAAPEHASPDVLDHVRETDELVFDAGDAASILRTVYVLN #oth ........11.112343.2.1....3.1.42..3..44111.1132.21232.1122212 rrnAC2547 :::::::::::R:VD:N::::::::A:S::::::::SSR:D::YE::::STV:::I:GIS Hmu1425 :::::::::::::LERD::::::::::::R::::::VR:N::L:::::::AV:AV::G:: VNG0447 ::::::::::::HVDD::S::::::::::TR::E::AT:::::::::A:DE::::AWA:A HQ2411A :::::::::I::::QT:::::::::R:::TR::E:::T::D::YEP:::::::::IS::: hla1951 :::::::::::::::::::::::::::::A:::S::LDR:::::GR:QS:T::::::::: HVO_1491 ::::::::D::R:::AN:C:L::::::S::G:::::::::::::PR:::::V:::A:A:: Hbo0057 ::::::::::::::::A::::::::K:::Q:::T::L::::::Y:R:::::M:::::::: consensus LLAQL------ #oth 32354333331 rrnAC2547 :VE::DEQGE: Hmu1425 R:VTSRDDADR VNG0447 QF:--:::::: HQ2411A H:DPIEYESS: hla1951 :::::E::::: HVO_1491 ::VD-:::::: Hbo0057 ::DER::::::