Home |  Text search
[S] (-) COG3679 Uncharacterized conserved protein
7 genomes BUD1289 7 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0853

rrnAC0403

HVO_1633

Hbo3211

Hmu1367

-

hla2508

-

HQ2588A

Pairwise sequence scores
Consensus score914 VNG0853 rrnAC0403 Hmu1367 hla2508 HQ2588A HVO_1633 Hbo3211
617VNG0853 1001 526 509 490 489 463 540
680rrnAC0403 526 976 687 469 497 512 585
651Hmu1367 509 687 961 498 446 502 554
658hla2508 490 469 498 961 519 524 598
649HQ2588A 489 497 446 519 925 547 647
668HVO_1633 463 512 502 524 547 914 638
767Hbo3211 540 585 554 598 647 638 1018

147 symbols
consensus       --------------MSIETD--------RLEELGRELGEAIAELPEYERFEEAKAAVEND
#oth            11111111111111..212333344323331311431.12.12212.32231114..132
VNG0853         ::::::::::::::::V:::AAGPSADHAADD:A:Q::D:::D::::R:LM:T:R:::TT
rrnAC0403       ::::::::::::::::::::TAADIDGD:V:A:AT:F::::::::V:Q::K:T:D::::H
Hmu1367         ::::::::::::::::::SETSDSAVDSHV::IAA:F:D::TQ::V:Q::A:::T:::::
hla2508         ::::::::::::::::V:QASPDEQA::AI:D:::N::DR::QTQ::::::A:RE::QR:
HQ2588A         ::::::::::::::::VQ::::::::::K::Q::SD:::::::T::::T:::T:::::A:
HVO_1633        ::::::::::::::::TQ:T::::::::::::::::::::::DH:K::AY::::::::A:
Hbo3211         VSGKFKRIGVQLVD:::Q::::::::::::::::H::::E:::T:::KA:::::::::::

consensus       DEVQAKIEEFEQIREEFMLARQTGNATQEALRKVQAAQEELHDMPVMAEYLDAQEELEDR
#oth            122.35.51.222.31.141.13.4.2223.321131.41..2521.221.21.52.343
VNG0853         ::::SR::::::L:Q:::::::S:D:DEA::NR::E::QH:::H::::D:::::DA::A:
rrnAC0403       ::A::A:K::::::::::::::::::S::D:::::QK::::::I:::SD::E::N:::L:
Hmu1367         EQA:E::::::S::::::::::::Q:D:::::EL:::::::::L:::S:::EV:S:::L:
hla2508         E::::::D::::::A:::Q::E::Q::NSG:Q:::E::D:::S:A::S:F:::::D:T:T
HQ2588A         ::I::Q:AK:QDH:DT::T:::A:T::::M:D::KS::S:::N:SK::A:::::KA:QSK
HVO_1633        :D::EL:T::N:L::::NVS::M:E::::G::::::::::::SE:::E:::L::A::VGE
Hbo3211         E:I:TE:R::Q:L:::::M::::::::::::Q:::S::R:::SK:::::::E:::::Q::

consensus       LEAINEAISEPLAVDFGGEAGGCCQD-
#oth            1142.231.12.2...1211.1..3.1
VNG0853         F:GL:DL::D::D:::V::S:A:::::
rrnAC0403       :QEL::IV::E::::::QK:::::E::
Hmu1367         :QEL::VV::Q:V::::EK:::::E::
hla2508         :::V:::::::::::::::::::::::
HQ2588A         ::D::K:::D::::::::::::::::E
HVO_1633        ::K:::::::::::::::::::::N::
Hbo3211         :::::K:::D::::::::::::::K::