|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 2652 | HVO_B0071 | HQ1124A | hla0317 | VNG2617 | Hmu1423 | pNG7278 | Hut2561 |
2015 | HVO_B0071 | 2649 | 1749 | 1887 | 1870 | 1734 | 1893 | 1860 |
2178 | HQ1124A | 1749 | 2635 | 1976 | 1967 | 2049 | 2107 | 2059 |
2309 | hla0317 | 1887 | 1976 | 2637 | 2118 | 2024 | 2155 | 2101 |
2308 | VNG2617 | 1870 | 1967 | 2118 | 2647 | 2076 | 2192 | 2087 |
2240 | Hmu1423 | 1734 | 2049 | 2024 | 2076 | 2678 | 2169 | 2052 |
2413 | pNG7278 | 1893 | 2107 | 2155 | 2192 | 2169 | 2980 | 2229 |
2305 | Hut2561 | 1860 | 2059 | 2101 | 2087 | 2052 | 2229 | 2679 |
390 symbols consensus --------------------------------------MRAAVYRGPGDIAVEEVPRPEI #oth 11111111111111111111111111111111111122121.114..11141.2212.31 HVO_B0071 ::::::::::::::::::::::::::::::::::::::VKS::::::::VRI::K:E::L HQ1124A :::::::::::::::::::::::::::::::::::::::S::::Y::R::R::N:VK:TL hla0317 ::::::::::::::::::::::::::::::::::::::::::IFN:::::G:::R::::: VNG2617 ::::::::::::::::::::::::::::::::::::::::::::Q:::E:::::::K:D: Hmu1423 ::::::::::::::::::::::::::::::::::::::::::I:D:::E:S::::::::: pNG7278 MFLYLYSIFGNCFHPITRPGGCDRRHENGFPQPTRNGS::::I:::::::T::::::::: Hut2561 ::::::::::::::::::::::::::::::::::::MD:::::F::::E::I:D::K:AL consensus EAPTDAVVRVTHTAVCGSDLWFYRGDSDREEGSRVGHEPMGIVEEVGDDVTSVAPGDRVF #oth 2412..11......1......1...4211131.21......1..1..21.3..41..1.2 HVO_B0071 QQ:::::I::::::I::::::::::HEEH::::G:::::::::::::E:::::Q:::::L HQ1124A :ES::::::::::::::::::::::KT::DIP::::::::::::::::::Q::DV::::: hla0317 ::::::I:::::::I::::::::::::::D:::P:::::::::::::NE::::::::::L VNG2617 :S:E:::I::::::::::::::::::::::A::::::::::::::::::::::::::::I Hmu1423 :D:G::I::::::::::::::::::E::::A::::::::::V::A:::::D::R:::H:: pNG7278 :S::::I::::::::::::::::::Q::::::::::::::::::::::::R::E:::::: Hut2561 D:::::::::::::I::::::P:::QE::DVP::I::::::::::::EE:R::::::::: consensus APFAISCGECEFCRKGLHTSCVNGDSWG--GD-NGGAQGEYVRARHADGTLVRVPDRYAD #oth 1..23...3..1..2.11.1.121221.112122..1.1.211332....1....112.1 HVO_B0071 V:::Y:::::::::::I::A::D:GFF:PH::ET::::A:K::VL:::::V::::E:::: HQ1124A :::K::::M:::::R::::::::::G::::D:::::::::VI:C::::::::::::A::N hla0317 :::::::::::::::::::::E::::::::::::::G::::::ST::::::::::::F:: VNG2617 ::::::::::::::Q::Y::::EDE:::::SEA:::G:::::KCPF:::::::::::::: Hmu1423 :::VV:::Y::Y::R::::::::::::::::::::::::::::SP::::::::::::::: pNG7278 :::VV:::R:::::::::::::::::::::::::::G:::::::TE:::::::::::H:: Hut2561 :::VT:::::::::::::::::::GF:::::E:D:::::::::::::::::::::::H:: consensus DEDTLESILPLTDVMGTGHHAAVSAGVEAGDTCVVVGDGAVGLCGVLAARRLGAERIIAV #oth .122.312.......1.......2.1131.1.21.1.............2.1..2..1.1 HVO_B0071 ::E::K:L:::::::S:::::::L:DL:::::A::I:::::::::::::K:I:::::::: HQ1124A :DSA:R:::::::::::::::::::::S::S:::::::::::::::::::::::A::V:: hla0317 ::E::R:L:::::::::::::::N::::::S:V::I:::::::::::::::::::::::: VNG2617 :::V:::L:::::::::::::::::::GE:::A::::::::::::::::Q:::::::::M Hmu1423 :::V:::V:::::::::::::::::::G::::::::::::::::::::::::::S::V:: pNG7278 ::::::A::::::::::::::::::::SE::::I:::::::::::::::::::::::::M Hut2561 ::E::QA::::::::::::::::::::D::S::I:::::::::::::::::::::::::M consensus GHHEDRLELAEEFGATDTVSAR-GQDAVERAQELTHGGANHVLECVGAASAMETAIEVCR #oth ...1...21.311...1.12311.3211132311.3..11..1....111.122.2312. HVO_B0071 ::::::::V:R:L:::::::S::::E:::EVL:::::::::::::::::::L:::AQ:A: HQ1124A :::P:::S::S::::::::::::::E:I:TV::M:G:::E::::::::T::::::V:::: hla0317 ::::::::::::::::E:::E:::EA::::I:::::::P:::M:::::::::N:::D:V: VNG2617 ::::::::::A:::::::I:::::D::I:::RD:::::::::M:::::::::DS::AIA: Hmu1423 :::P:::A::A:::::E::LGGD:T:V:D:VR:::Y:::E:::::::::::::Q:V:::: pNG7278 :::::::::::S::::E::A::::::::DA:DD::N::::::::::::::::::::D::: Hut2561 :::::::A:::S::::::IA::::EE:::::::::Y::::::M::::STG::N::::::: consensus PGGTVGYVGVPHGVEDAGLDIFGMFGDNITLRGGVAPVRAYADELLADVLQGTLDPSPIF #oth ...11.1....1121251233143.31.23241.2....1.111.12...1.....1.11 HVO_B0071 :::SI:A:::::-::S:DF-LQPI:YK:LSFSA:G::::N:IE::MD::::::::::::L HQ1124A :::::::::::::LD:-:::L:SF:::::::Q::::::::::::::::::::::::A:V: hla0317 ::::I::::::Y:::EE::NV:::::::V::A::::::::::E::M::::::::::A:V: VNG2617 :::::::::::Y::::G:::V:T::S::::I:::::::::::E::M:::::::::::::: Hmu1423 ::::::::::::::D:::VP::D::::::A:::::::::::::D::E:::G::::::::: pNG7278 :::::::::::::LD:S:::M:SL:::::G:N::I::::::::::::::::::::::::: Hut2561 :::::::::::::I::D::::::L:M:::S:N::I:::::::::::::::G::::::::: consensus TKTVDLDGVPEGYRAMDEREAIKVLVKL-- #oth .1..2.22131..21..1.1....1.1411 HVO_B0071 :::::::::::::Q:::D::::::M::VDE HQ1124A :::::::SIS:::Q:::::D::::::EI:: hla0317 :E::G::E:D::::M::::::::::::::: VNG2617 :::::::::::::A:::D:::::::::A:: Hmu1423 ::::S:EEIAA::::::::D::::::EP:: pNG7278 ::::::N::::::Q:::::::::::::::: Hut2561 :::::::::::::::::::::::::::P::