| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 2689 | hla2628 | HQ1512A | HVO_1096 | Hbo0601 | Hut0349 | rrnAC0196 | Hmu0697 |
| 1863 | hla2628 | 3027 | 1403 | 1626 | 1717 | 1361 | 1403 | 1430 |
| 1637 | HQ1512A | 1403 | 2987 | 1634 | 1701 | 1261 | 1202 | 1231 |
| 2042 | HVO_1096 | 1626 | 1634 | 2746 | 2045 | 1408 | 1448 | 1485 |
| 2078 | Hbo0601 | 1717 | 1701 | 2045 | 2786 | 1426 | 1433 | 1429 |
| 1835 | Hut0349 | 1361 | 1261 | 1408 | 1426 | 2842 | 1662 | 1752 |
| 1873 | rrnAC0196 | 1403 | 1202 | 1448 | 1433 | 1662 | 2876 | 1883 |
| 1921 | Hmu0697 | 1430 | 1231 | 1485 | 1429 | 1752 | 1883 | 2789 |
469 symbols consensus -----AAFDIVAFHERAVETASNEDVDEMRELLVETLEDAGVEPTVDDAGNVLASR---G #oth 1232344113431223114241424143..221.21.336143331142.1121311213 hla2628 ::MSG::::S:S:L:Q::Q:P:H:S::::::FV::::DQF:A:SE:VAG:C:::KK:YSD HQ1512A :::::-----------------------::::::G::QQYDIDVH::S:::TI:T::::: HVO_1096 MSGDADG::P:::L::::PV:::D::G:::D:::::::AE::D::::::::TV::K:::: Hbo0601 ::::MSE::P:::L::::PV::::::A::::::::::ASH:::::::::::T:::K:::: Hut0349 :::::M::::LD:::Q::R:E:Q:S:EA::SV:::::::D::SVR::GG:::V:H:SGS: rrnAC0196 :::::M::::PS::R:::::R:D:H::D::S:::D::::::EY:EI::L:::VV:::::- Hmu0697 :MADA:T:::D:::RE::::P:HDA:::::D:::DA:A:G:H:A:::E:::::::::::E consensus ----------------AAEDGTHLVLNTHIDTVPPHVPFERR------------------ #oth 1111111111111111343333.111...1...2..2.2224111111111111111111 hla2628 :::::::::::::::::PGE:P:::::::L:::T:::::::G:::::::::::::::::: HQ1512A IKRDSTTNDCANSNNSESTRE::::F:::::::S::I:LDQSRSSRSVSSNTDTHPRSQN HVO_1096 :::::::::::::::::::PA::::::::::::S::::YD:D:::::::::::::::::: Hbo0601 ::::::::::::::::DDDPER:::F:::::::S:::::::::::::::::::::::::: Hut0349 ::::::::::::::::ETD:TS::L::::L:::::::::::-:::::::::::::::::: rrnAC0196 ::::::::::::::::GD:::::IL:::::::::::L:Y::::::::::::::::::::: Hmu0697 :::::::::::::::::::E:P:::::::::::::::::R--:::::::::::::::::: consensus ----------------------DGEGD------VIRGRGACDAKGPLAALLAAFLAADPG #oth 111111112333322322233321532222222212...1.....1...2131.121224 hla2628 :::::::::EAHEDERADSVSD::P::::::::::::::::::::::::::SG::::::E HQ1512A AATTSGDTVTDKKSRSAESMVANSSTESANEPAR:H:::::::::::::M:::::RV:VS HVO_1096 ::::::::::::::::::::::E:---::::::::H:::S:::::::::::S::F::::: Hbo0601 ::::::::::::::::::::::::R::GDDSDD::::::S:::::::::I::::F:VE:A Hut0349 :::::::::::::::::::::::::--::::::IV::::::::::S:::MVG:::R:EI: rrnAC0196 :::::::TEPPGPDETIDGTGG::D::::::::IVC:::::::::::::::D:::TVT:D Hmu0697 ::::::::::::::::::::::E::D::::::::V::::S:::::::::::::::R::V: consensus DG-RVTLAITPDEETLSTGAAALD--------TLDADL--YIVGEPTGLDVCTAAKGRFE #oth 42112.1.211...3211.122.4111111122121.31122.....2..1.1..1.1.1 hla2628 R:::I:::L:::::S::L:::::TGRSPGTEDR:NG::::FL:::::S::A::::::::Q HQ1512A SKATI:::V:::::V:::::::::::::::::-::::M:::::::::::::::::::::Q HVO_1096 PDA:::::::::::L::::::Q::::::::::-::G:R:::::::::::::::::::::: Hbo0601 ::A:::V:V:::::V:::::D:::::::::::-::::::::::::::::::::::::::Q Hut0349 :::::::::::::::TQ::::H:V:::::::E::::::DAA::::::D::::Y::R:Q:: rrnAC0196 :::::::::ST::::TQ::G:H:A:::::::D:I:::G:::::::::::::::::R:Q:: Hmu0697 A:::L::::::::::HQ:::GH:E:::::::E::S::G:::V:::::D:::::::R:Q:: consensus GTVTLSGEAAHAADPASGVNAVRAAAPALQAIRSYDDDRGE--HPQLGPPTLTPTMVEGG #oth .22312.211..12142.3..1312233251222122443423.22..51211.1211.. hla2628 :::E:::T:::::EF:-:A:::A::EG::A:::TF::GAD::::::::::K::::VI::: HQ1512A ::L::T:T:::::A:T:::::IA:LED::K:::T::T:QPNAI:::::K::VV::T:D:: HVO_1096 :::S:::V:::::E:Q::::::D:L::V:D:L::F::::EA::::D:::A:::::::D:: Hbo0601 ::LR:::V:S:::E::::::::F:LEQ::T::::F::G:D::::::::AA:::::T:::: Hut0349 :QI::T::S:::S::SD:I::::VIG:TIESMDR:::A::TAA:DT::S::::::::::: rrnAC0196 ::::IH::S::::::G::H::I:::::I:::ME::EEKK:PGE:ET::Y:I:::S::::: Hmu0697 :R::IH::S:::S:::D:A::I:::::IM::ME::SEHH:PGE:ET::R:::::S:I::: consensus EATNQVPAECRITFDRRSVPPETAEEFRASLEAALRQALPDDVGVDVSLTRRDTPFLEAF #oth 322..1..212213........1114.334.33213532123211312.22121..2... hla2628 G:::::::D:E::A:::::::::::G::S::AD:V:EST:K:I::A:A::D:ES::F::: HQ1512A T:::::::T::VVL::::::::::DT:QDK:TT:VNT:VSE:::::F:::D:P::::::: HVO_1096 ANS:::::D::LVV:::::::::::G::EE::ST::A:V:::::::FA::E:P::::::: Hbo0601 :S:::::::::LVL::::::::::::::S:::S:V:D:V::::::EF:::D:P::::::: Hut0349 ::P::I:::V::::::::::::RS:D:P:::::H::NL:::EI::::::V:P::::P::: rrnAC0196 ::::::::::T::::::::::::S:S:C:D:Q:H:E:W::ESM:LT:D:I:P::::P::: Hmu0697 ::P:::::::T::::::::::::SD::PER:::H:G:W:::GMSL::::V:P::::P::: consensus ATDPDHELVQTLAAASR-AG-S--------GAVRPFGAATEASYFAP-APTVVFGPGVLA #oth 2.131131.431331224223211111111142.2.1.....12.1231.11.....1.1 hla2628 S::::::::GAV:N:A:I:AD:TGILADRG:::::::::::::::::::::::::::D:: HQ1512A ::N:::K::T::ID:TKQT:E:::::::::AQQ:C:T::::::::S::::V::::::::: HVO_1096 :::::::::TS::::::D::GR::::::::AD::::T::::::::S::::VA:::::D:: Hbo0601 :::D:::::::V:::::R::G::::::::::D::::T::::::::S::::V::::::::: Hut0349 E::::AQI:EV:RD::G:--:-:::::::::S::::::::::AQ::KL:::::::::::: rrnAC0196 :::T:A:::R::QE::G:--:-:::::::::G::Q:::::::::::NNG::::::::D:S Hmu0697 E::REAT:::::::E:G:--:-::::::::::I:::::::::AH:::D:::::::::::: consensus DDEGAVAHAEREYVRRSEVRRAAAALRAAVEALLA-------------- #oth .23.1...13....23331441.42133233413334322122112111 hla2628 :NA::::::::::::VR::EA::KTVERSIA:::GDAGATAADDAV::: HQ1512A ::T::::::D::::TV:S:IS::R::TD:TQQ:I-:::::::::::::: HVO_1096 :::::::::D:::::TDD::T:::::::::A::T::::::::::::::: Hbo0601 ::H::::::::::::TDA:::::T::TD:ATE:VGDT:::::::::::: Hut0349 ::::P:::SP::::D:QD:L:T:DV:VETI:TM::VGDQPAERDASSSF rrnAC0196 :ET:::::SK:::::L::::T::R:V:ET::R:V-:::::::::::::: Hmu0697 :E::::::S:::::::::IHE::::VE:T::R::STSR:::::::::::