Home |  Text search
7 genomes BUD1303 7 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1529

HVO_2381

Hbo2082

Hmu2082

Hut1597

hla1609

-

HQ3176A

Pairwise sequence scores
Consensus score3381 HQ3176A Hut1597 hla1609 Hbo2082 HVO_2381 rrnAC1529 Hmu2082
2215HQ3176A 3846 1841 1789 2006 1937 1867 1841
2239Hut1597 1841 3189 1887 1968 1892 1950 1974
2533hla1609 1789 1887 3789 2199 2160 2132 1990
2707Hbo2082 2006 1968 2199 4099 2486 2255 2188
2692HVO_2381 1937 1892 2160 2486 3804 2341 2152
2704rrnAC1529 1867 1950 2132 2255 2341 3309 2238
2505Hmu2082 1841 1974 1990 2188 2152 2238 3254

581 symbols
consensus       MRTLAFDGRMGASGDMILAALLAAGADRDALAPVEDALDVRYDVSETTKNGILATRVDVL
#oth            1321211111..1...1111.222..1211.11.112.214141422233..5.23.312
HQ3176A         :SL:V::::::::::::::::IS:::SA:::S::::::GIQ:V:NTE::A:::::::HIV
Hut1597         :D::::::::::::::::::::DL:::P:V:::::N::G:EF:IDR::TG::D:AS:::R
hla1609         ::::V::::T::A::::C:::I:::::P::::::T:R:P:::EIG:::::::R::T::::
Hbo2082         ---------::::::::::S:::::::::::::::N::::H::::TVV::::S:R::R:R
HVO_2381        ::L:::::::::::::L:G::V:::::PSV:S::::::::T:R:H:VD:::::::K::::
rrnAC1529       ::::::::::::A:::L:G::::::::::::SV:::T::IE:A:::VDRR::A:::::::
Hmu2082         ::::::::::::::::L::::::V::::::::::::::PI:::::::VER::G::S:A:V

consensus       LADAA-----------------TDGDGGHDHAHGG------HGHEHD-------H----T
#oth            2353332333333311111111544.1432353451122222313253232122133342
HQ3176A         SDPESTSAQSNKQS:::::::::EV::A:QEMTAS::::::DA::D:KSQSDDS:IHDT:
Hut1597         Y:A--:::::::::::::::::EA:::T:E:E::A::::::---::::::::::-::::-
hla1609         :----:::::::::::::::::DGD:DD:::T::D:::GHS:::S:N::::::::GDGDG
Hbo2082         :D:T:GGGEGANDG::::::::H:A::::E:::EH::GDHS:::::HHHAHDHS:GEGH:
HVO_2381        ::E:DGGDPRGEGHGDDHRRLRA:::D:A:SDD::DRDDAE:S:Q:QYHHHDHA:DEEQ:
rrnAC1529       :TN:::::::::::::::::::S::::SQ::::D::::::::S:S:T:::::::-::::-
Hmu2082         :T::DE:::::::::::::::::RT::TDEDSQMP::::::------:::::::-::::-

consensus       H-------H-----HG--H-HDHSH--DHTHDD---------------------------
#oth            222223221433332355451123.113.3322111111111111111111111111111
HQ3176A         ENDSNTHT:AQNNRQQDTDQNKPT:::K:V:A::::::::::::::::::::::::::::
Hut1597         -:::::::-:::::--::-::::H:::::A---:::::::::::::::::::::::::::
hla1609         :DHAHEHG:SHEHD:SHD:S::::::::::::H:::::::::::::::::::::::::::
Hbo2082         :DHSHGAG:THDHS::AG:T:::::GAG::::HSHGAGHTHDHSHGAGHTHDHSHGAGHT
HVO_2381        :::::::::DGDDS::YSQG:::::::P:S::::::::::::::::::::::::::::::
rrnAC1529       -:::::::-:::::--::-:::EG:::G::G:::::::::::::::::::::::::::::
Hmu2082         -:::::::-:::::-SKVPK:::::::::AD:-:::::::::::::::::::::::::::

consensus       ---------THDHSHDEHT-------------AEGHGPHRTYAEVVEIVESMDLPAGVEA
#oth            1111111114.3.32333311111111111122..1.13.314..222.13.4.243.23
HQ3176A         :::::::::G:::::::SV::::::::::::PI:::::A:::R::I::::R:G:N:D::S
Hut1597         :::::::::::E:EST---:::::::::::::V:::::T:R:D::I:V::R:A::DA::E
hla1609         :::::::::::::AES::-::::::::::::::::A:V::::P:::AL::::::LES::S
Hbo2082         HDHSHGAGH::::::GD::EHPHDDDHAHETP::::::::A:::::::::::G::N:::R
HVO_2381        ::::::::HK:H::::D::::::::::::::H::::::::::P:::DL::::N::P::V:
rrnAC1529       :::::::::A:A:::::::::::::::::::H::::::S::::::::L::G:::::A:R:
Hmu2082         :::::::::S:::T:GGTA:::::::::::::::::::S:SLG::R:::GE:T::D:::R

consensus       DALAIFERLGEAEAAVHGTDLDETHFHEVGADDAIADVVGACLLLDDLDVERVVTTPLST
#oth            3.331.32..2...2..1.3.2211.....1...1..1..22...1.11112.2121212
HQ3176A         T:IE::T:::T::::::::S:SA:Q:::::T::::::I:::A:::A:M::D::CV::V::
Hut1597         R::S::A:::T::::::::::HA::::::::::::::::::S:::A:::PDK:L::::::
hla1609         L::DA:::::R:::S::::E:::::::::::::::::::::A:::::::P:::::::VA:
Hbo2082         ::K:::RI:::::::::::E:::::::::::::::::I:::::::A:::::::::S::::
HVO_2381        ::T:::RV::::::E:::::::::::::::::::V:::::V:::::::G:D::::G:VAV
rrnAC1529       :::::::I::::::S:::::::D::::::::::::::I::T::::::::::Q::::TPA:
Hmu2082         :::::::I:::::::::D:T:::M::::::::::::::::V:::::::G::::::::::A

consensus       GGGEVEMSHGTYPVPAPAVVEIAARADWSLRGGPVDAELLTPTGAAILAHVAEGVETLPT
#oth            .2.132.1..222..3..1111225.12.24...131........1...22.1.2221.4
HQ3176A         :S::IT::::SFS::P:::::::EE:T::::::::N::::::::::::::I::::Q::::
Hut1597         :D:T:S:A:::AT:::::::::I:D::Y:IQ:::IKR::::::::::::E::D:::::::
hla1609         ::::::::::V:::::::TT:V::G::F:VV:::I:R::::::::::::A::::ADAI:D
Hbo2082         ::::QS:A:::::::T:::::::Q::::::K::::E::::::::::::::::::::S:::
HVO_2381        ::::T:::::::::::::::N:T:A::::V:::::E::::::::::::::L::::::::S
rrnAC1529       :::T:::::::::::T:::::::EQ:::::Q:::I:R:::::::::::::I:::T:S::P
Hmu2082         :::T:::::::::::G:::::::E::::::A::::::::::::::S::::::D::DA::E

consensus       LDVDASGYGAGGYDFEDRPNVLRVLVGD-----G-----AGR------------------
#oth            141411.....13223221.1..332.111111222222222221212222222222222
HQ3176A         :TIA:T::::::::::EY:::::::I:EVPTPM:PEASMNTDTI:EANNTDRPQPDLETD
Hut1597         M::W:::::::DH:TG::A:A::::L:E:::::T:::::::D::::::::::::::::::
hla1609         :::::T:::::DAT::NH:::::::::E::::::RDLEVG::DHGDAPHHTDDHQTDDHH
Hbo2082         :EI::::::::::::P:H:::::T::::::::::::::::::::::::::::::::::::
HVO_2381        MS:ES:::::::WE:P:H:::::AV::::::::::::::GS:::::::::::::::::::
rrnAC1529       ::IN::::::::W:LD:::::::AM::::::::S::::::::::::::::::::::::::
Hmu2082         :A:E::::::::::::N::::::SI::::::::::::::G:G::::::::::::::::::

consensus       ---LRRDEITVLETNLDDAPPEVLGGLQETLKDAGARDVTIVPTTMKKSRPGHLVKVICK
#oth            222.3112.2.....1..24..2..2..32.422.....1.1.21........11..121
HQ3176A         RLT:D:ES:V:::::::::T:::::S:::::T:V::::::::::S:::::::::I:::T:
Hut1597         ::::::ES:::::::V::VS::M::::::::TE::::::S:L:V::::::::::I::VV:
hla1609         THG:VH:D:A:::::::::D:::::::::::SR:::::::::::::::::::::::::::
Hbo2082         ::::I::::::::::::::A::L:::::S::::V:::::::L:A::::::::::::::V:
HVO_2381        ::::V:::::::::::::::::::::::A::::::::::::::::::::::::::::VV:
rrnAC1529       :::::::::::::::V:::::::::D::RS:P:I:::::S:::::::::::::II::::R
Hmu2082         ::::::::::::::::::TT:::::S:::R:Q:::::::S:L:A:::::::::::::V::

consensus       PEDAERVARRLAEETGTLGVREHGAGHRWIADREFETVTLEIDGEDYEVAVKVASDADGT
#oth            .2.1221.4...21.....1.211.2...3.4.342.1323222352113..112131.3
HQ3176A         :D::SS::Q:::V::::::I:::P:R:::R:N:TS:::::T:NDNS::I:::IGR::::V
Hut1597         ::::D::::::::::::::::::::::::V:E::TR::DI:L:A:T:P:D::::::RE::
hla1609         :::::AI:E:::R::::::::HS::S:::::E:D::::::S:::G:H::T:::::T:::D
Hbo2082         ::::::::N:::V::::::I:::::::::T:S:R:::AE:::ED:RH::::::::::E:A
HVO_2381        ::::::::Y:::V::::::I:::::::::T:R:::::A::D:::D::::S:::::::::V
rrnAC1529       :::::::::::::A::::::::S::::::V::::Y:::V:SV:::QF::T::I:::T:::
Hmu2082         :A:S:::::::::::::::::A::::::::::::IV:A:V::::DA::ID::::T:SE::

consensus       VYDVSAEYDDAAAVADETGLPVREVMRRAERAVRE------
#oth            22.3.1.111.24..42.13.1.11221.143224443331
HQ3176A         I::Y:::::::L:::TT:DH::::IR::::A:A:SIITSDS
Hut1597         WL:A::::E::LS::R:::R::::::K:::Q::G:::::::
hla1609         ::::::::::::E::ET::::I:D:L:Q:::E::DRLDEE:
Hbo2082         :::Y:::F:E:Q:::::::::I::::::::NI:AGDD::::
HVO_2381        :::R:::::::LT::N:::V::::I::::VD::ASEAGGT:
rrnAC1529       :F::::::::::::::V:::::::::H::::M:::::::::
Hmu2082         :F:::G::::::G::::::::::::L::::D:L:-::::::