| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 6966 | hla1992 | HQ2928A | HVO_2766 | Hbo2498 | Hut0475 | rrnAC0959 | Hmu1752 |
| 5175 | hla1992 | 7451 | 4703 | 4806 | 4697 | 4657 | 4668 | 4762 |
| 5617 | HQ2928A | 4703 | 7207 | 5259 | 5264 | 5045 | 5029 | 5028 |
| 5942 | HVO_2766 | 4806 | 5259 | 6953 | 5591 | 5296 | 5307 | 5288 |
| 5886 | Hbo2498 | 4697 | 5264 | 5591 | 7019 | 5189 | 5355 | 5317 |
| 5829 | Hut0475 | 4657 | 5045 | 5296 | 5189 | 6949 | 5413 | 5533 |
| 5921 | rrnAC0959 | 4668 | 5029 | 5307 | 5355 | 5413 | 6984 | 5669 |
| 5939 | Hmu1752 | 4762 | 5028 | 5288 | 5317 | 5533 | 5669 | 6938 |
1026 symbols consensus M-MRGRE-----------LL---AER-----DPD-F------------------------ #oth 2333..411111111111112221332122224233111111111111111111111111 hla1992 VPRH::TPDKRAGSRELTRIRAN:::LRVEP:VTD:PHRAQRPTVSELTDSGSDGEGGAE HQ2928A :SQ:::A:::::::::::::REA::QARTDA:KTS::::::::::::::::::::::::: HVO_2766 :TR:::S:::::::::::::::::S::::::GG::Y:::::::::::::::::::::::: Hbo2498 :SS:::R:::::::::::::CEA::::::::AT:P::::::::::::::::::::::::: Hut0475 -::G:::::::::::::::::::EGV::::::V::L:::::::::::::::::::::::: rrnAC0959 -::G::::::::::::::R:::::AT:::::::E:-:::::::::::::::::::::::: Hmu1752 -::E::::::::::::::R:::::GV:::::::E:-:::::::::::::::::::::::: consensus -------------------EFDPESVSIDDADVLDRLEPVVQEWWVEQFGEFVPGNGGFF #oth 11111111111111111114.1.12.523.22..2113.3.11...23.132.33.1.1. hla1992 PSARALLREALAGEDAPAV:::::T:P:S::::::::S:P:RR:::SE:AAH:GE:::L: HQ2928A :::::::::::::::::::T::::T:E:N:::::T::D:A::::::S:::RY:AE:D::: HVO_2766 ::::::::::::::::::::::::::TVA:E::::L:::A::::::DR:::::::::::: Hbo2498 :::::::::::::::::::D:::QT::LA:EN::A::::S:R::::D:::RY:D:::::: Hut0475 :::::::::::::::::::G::::::::::G:::ALF::::R:::::T::PY::D::::: rrnAC0959 :::::::::::::::::::-:N::A:D::::E:::::A:::::::::::::::::::::: Hmu1752 :::::::::::::::::::-::::::A:::G::::::A::::::::::::::::H::::: consensus TPPQREAIPLIHDGENALICAPTGSGKTLASFTAIINELFRRARE--DGLENSVYCLYVS #oth ....12.1.211231.1.11........1.1.111211..312.33313.1.2.....1. hla1992 :::::G:::RVD::::C:VA::::::::::A:::VLDD::A:D:A::GT:D::::::::: HQ2928A ::::::::::VDNQ::::V:::::::::::::::VL:D::K:::KRD:::::Q:::::I: HVO_2766 :::::G:::R::::D:::::::::::::::::::::::::::E::SP:::D::::::::: Hbo2498 :::::::V:::D:S:::::::::::::::::::::::D::::D::LA:::::::::::I: Hut0475 ::::KA:::H:::::::::A::::::::Q:::A:::::::::D:D:::::::A:::::I: rrnAC0959 ::::K:::::::ER:::::::::::::::::::G::::::GK::::::E::::::::::: Hmu1752 ::::K:::::::ER:::::A:::::::::::::G:V::::AK::::::A:D::::::::: consensus PLKSLANDIHRNLEVPLSGITARL-----------------------------DDRGEDV #oth .........1...43..42.2243111111111111111111111111222113121241 hla1992 :::::::::E::::A::N::A:EM::::::::::::::::::::::::TAASES:ED:E: HQ2928A :::::::::::::D::::::RE:IIADAKSKSESEIKTQSANTAATDGSSGSEE:VDSSI HVO_2766 :::::::::::::TE:::::ADIA:::::::::::::::::::::::::::::A:::GT: Hbo2498 :::::::::::::TQ::E:::E:M::::::::::::::::::::::::::::::E:::T: Hut0475 ::::::::::::::::::E:::T::::::::::::::::::::::::::::::E:::::: rrnAC0959 :::::::::::::GQ::D::::K:::::::::::::::::::::::::::::::E::::: Hmu1752 :::::::::::::A:::TD::EK:::::::::::::::::::::::::::::::E:::A: consensus E--IRHAIRHGDTSDADRQAMLEETPHILNTTPETLAILLNSPKFKEKLRTVEYVIVDEI #oth 3112.1.......1221.13..11...1........1....1.1.21..111...1.... hla1992 DPGV:Q::::::::K:::R::::::::V:::::::::::::A:R:R:::::::::V:::: HQ2928A N::V:::::::::DS:E::R:::::::::::::::::::::A:::R::::GI:::::::: HVO_2766 D:::::::::::::S::::K::S::::::::::::::::::::::::::::::::V:::: Hbo2498 T::L:::::::::DST:::K:::T::::::::::::S::::::::::::::::::::::: Hut0475 :::::::::::::::S:::::::::::::::::::::::::::::NK::E:::::::::: rrnAC0959 :::::::::::::::SE::::::T::::::::::::::::::::::K::E:I:::::::: Hmu1752 :::::::::::::::S:::Q:::T:::::::::::::::::::::::::::::::V:::: consensus HSLAENKRGTHLSVSLERLEELAEDSPTRIGCSATVEPLDTVAEFLVGRERDGG-----D #oth .1..2........1.....1323341.............11113....233312222123 hla1992 :A::G::::::::A:::::T:I:D::::::::::::::::E::D::::C::VA:EVGDP: HQ2928A ::::A:::::::::::::::::T:T::::::::::::::S::GK::::YNN::-:::::T HVO_2766 ::::::::::::::::::::D::TS::::::::::::::::::::::::-E::-:::::E Hbo2498 ::::::::::::::::::::N:CH:::::::::::::::S:M:::::::GD::-:::::: Hut0475 ::::A:::::::::::::::AM::T::::::::::::::::M::::::::DP:::::::: rrnAC0959 :::::::::::::::::::::MV:EP::::::::::::::::::::::C:EP:::::::E Hmu1752 ::::::::::::::::::::A::DG:::::::::::::::EM:R::::C::H:AGGDDWS consensus ---PRDYELVDTRFARDFDLELECPTDDLIHTPRSVVQDRFYDRLHDLIQDHTNTLVFTN #oth 111..11.2..1..2.1..23131.11...3.2234124...22.231141.3..1..1. hla1992 GFA:::C:V::A::G:E:::Q:RT:AA::::::D:::T:::::A::G::E::E:::::A: HQ2928A :::::E::::::::V:E:::SV::::::::::::GK::A::::::EQ::D::K::I:::: HVO_2766 ::::::::::::::V::::VR:::::::::R::::E::S:::::::::VAS::::::::: Hbo2498 :::::E::::::::V:::::Q:::::::::N:::N:::E::::::DE:V:S::::::::: Hut0475 ::::::::V::A::::E::M::TT::::::::SQ:TIN:::::Q:::::G::M::::::: rrnAC0959 ::::::::I::::::::::M::S::A::::N:::DIITE:::TQ:::H::S::::::::: Hmu1752 :::::EC:I::A:::::::V::TT::::::D:A:D:I:G:::EQ::E::::::::::::: consensus TRSGAERVLHNLRERFDGYDESNSGCHHGSLSKERRQEIEEELKAGTLDVVTTSTSLELG #oth 1......1.22..2422321.21........1132.33..25..3.411........... hla1992 S::::::T:RE:::::-:::::D::::::::GEAQ:TR:::G:::::::::::::::::: HQ2928A :::::::::ST::D:S:TF::::::::::::::T::::::S::::::::::::::::::: HVO_2766 ::::::::::::::G::DI:::::::::::::::::::::SK::::E:R::::::::::: Hbo2498 ::::::::::::::NY:::::Q::::::::::::::::::R:::D:N::::::::::::: Hut0475 :::::::::::::::::A:::D:::::::::::DK:EA::SD::S:DV:::::::::::: rrnAC0959 ::::::::::::::K:GD::::::::::::::::::RD:::S::E:S::::::::::::: Hmu1752 :::::::::::::SE::::G:D:::::::::::::::::::R:::::::::::::::::: consensus IDMPHIDLVVQVGSPKSVAALLQRVGRAGHQLGETVEGRVIALDRDELVECAVMLKKAEE #oth .....2.............1....1.....21.1..2..12.......1...1..51.23 hla1992 :::::L::::::::::::::::::::::::SP:::::::MF:::::::::::A::AR::: HQ2928A :::::V:::::::::::::::::::::::::::::::::::::::::::::::::Q:::S HVO_2766 :::::::::::::::::::::::::::::::::Q:::::::::::::::::::::S:::S Hbo2498 :::::::::::::::::::S::::::::::R::Q:::::::::::::::::::::R:::D Hut0475 ::::::::::::::::::::::::::::::::::::A:::V:::::::I:::::::::A: rrnAC0959 ::::::::::::::::::::::::I::::::::::::::::::::::::::::::E:::R Hmu1752 :::::V::::::::::::::::::::::::::::::T:::V:::::::I:::::::::T: consensus GFVDRVFIPENAQDVAAQHVYGMAINAVRPEREIRQILRRAYPYRNYGDDDWERLMRYLT #oth ....1.12..2.3...2.11......41111313442.1..1...3131212.3.31.1. hla1992 ::::G:SL::G:A:::::::::::::QI::D::::EV::::H:::EF:TGEY:::::::: HQ2928A ::::::::::G:H:::S:QI::::::EI:R:ATF::::T::::::::::::::E:L:::: HVO_2766 ::::::::::::F:::::Q::::::::I:::S:L:ET:::::::::FS:::F:::F:::: Hbo2498 :::::::V::::::::::::::::::R:WR:E::L:T:::::::::FS:AE::Q::A::: Hut0475 :::::::V::::H:::T:::::::::D::::S:VTG:::::::::T:T:::::A:L:::: rrnAC0959 ::::::::::::::::T:QI::::::D::::ETFKSV::::::::D:D:G::::::::M: Hmu1752 :::::::V::R:::::T::::::::::::::::VEA:::::::::E:T::E::Q:C:::: consensus ADYPGLEDKNVYAKIWRDTNDPPDGEHHYEEYPVGEPLIGKRGRLARVIYMTNIGTIPDS #oth 1..2.1212...1.1...2..1.1..1.11211..12.1.....1........1...... hla1992 G::E::AER:::P:V:::A:::::::::H:::::::T:V::::::::::::::V:::::: HQ2928A :::D::DE::::P::::::::A:S:::::D:F:::T:::::::::::::::::::::::: HVO_2766 :::D::::::::::::::::::::::::::G:::::::::::::M::::::::::::::: Hbo2498 :::E::::::::::V::::::A::::::::::D:::::V:::::M::::::::::::::: Hut0475 :::::M::E:::::::::E:::::::Y::D:F:::::::::::::::::::::::::::: rrnAC0959 :::::M:::::::::::::::A::::::::D:D:::H::::::::::::::::::::::: Hmu1752 :::::M::::::::::::::::::::::::::::::H:::::::M::::::::::::::: consensus FTCDVLTRSGDEWVGQLDENYLDTLEKGDVFVLGGDRFEYRYRRGSKVYVDRTSARPTVP #oth .2.1.31.33242..1...3....123....1...22111...........1.23..... hla1992 :G:::V::D:EA-::T:::::::::AP::::A:::E::AF:::::::::::::GE::::: HQ2928A :S:T:::::E:KQ::T:::D::::::T:::::::::::::::::::::::::::E::::: HVO_2766 ::::::V:GA:Q:::T:::G::::::::::::::::H:A:::::::::::::::Q::::: Hbo2498 :::::M::::::::::::::::::IDS::::::::EH:::::::::::::::::K::::: Hut0475 ::::::::GDS::::::::S::::::T::::::::::Y:::::::::::::H:::::::: rrnAC0959 :::::V:::D:S:::::::S:::::::::::::::NN::::::::::::::::A:::::: Hmu1752 :::::Y::A::::::::::G::::::S:::::::::N::::::::::::::::::::::: consensus SWFSERLPLSYDLGREILAFQGELLDRLDAGGPPAVRLWLREFPLDENSVRAITRMFDEQ #oth 1.11......1..11.223..22124..331.3212.5..121.2.2111..1212121. hla1992 T:YA::::::A::AA:V::::AD:::::ER:::::::A::::L:I:G::::::::TY::: HQ2928A :::::::::::::::::AS::::VIN::E:D:AT:T:Q::D:::I:T::A:::::IY:Q: HVO_2766 ::::::::::::::::LA:::AD:V:::::::A::::S::::::::::::::V::::::: Hbo2498 :::::::::::::::::TR::::::G:::D:::::::T:::A::V::::::::::::::: Hut0475 ::Y:::::::::::::V:S::R:::A::QR::QS:A:::::::::::H:::::VE:::Q: rrnAC0959 ::::::::::::::::::D:::Q:::::AD::MSE::N:::T::V::::::::A:::R:: Hmu1752 :::::::::::::::::::::RQ::S:::E::::::::::::::::::T::::::::S:: consensus VAYAGPESVSTDDRLVIEEELDRDEYERRFYVHSNYGRRFNDGLSRLLAYHCARRANANV #oth 12.1.23..1.32.111.241.112.3.2111.22......1.1...2.224.2223.11 hla1992 :::::A:::::PS::AV::V::::A:K:::H::AT::::::E:::::V:AE::A:TD:DP HQ2928A RQ:T:AT:::::::::V:::::::S:R::::I::T::::::::::::::::::QQT:::: HVO_2766 :R:::::::A:P::::V:T::::EA:R:Q::::CT::::::::::::::::A:::T:::: Hbo2498 :R:::S:::A:ES:IA:::Q::::::Q::::::::::::::::::::I:F:F:::S:::: Hut0475 :R::::::::::E:::::::R::ES::::Y::::::::::::::::::::RV:QQ:T::: rrnAC0959 ::::::D::A:T:::::::T::H:::::HYHI:::::::::::F:::::::I::E:S::: Hmu1752 :::::SK:::::::::::VA::H:::::HY::::G::::::::F:::V::RV:Q::S::: consensus QVAVADNGFTLSMPLNRKVDVAGVLRDIDPEAVRADLRAALDGTDLLQRYFRINATRSLM #oth 21....2..1121.......232122211.43122...11.1.....2.....1...1.. hla1992 T:::::R::S:AL:::::::::::I:EL:::T::E::::::R:::::::::::::::::: HQ2928A KI:::::::::V:::::::::GA::ES:E:A:::S:::S::::::::K:::::::::::: HVO_2766 :::::::::S::::::::::LV:::::L:::::E:::::::::::::K:::::D:::::: Hbo2498 :::::::::SI::::::::::EA:I:::::DS:DE::::::::::::K:::::::::A:: Hut0475 ::::::H::::::::::::::::::ES:::VD:::::::S:::::::D:::::::::::: rrnAC0959 ::::::::::::::::::::I:RIV::L:::TA:E::::S:::::::::::::::::::: Hmu1752 ::::::::::::::::::::IE:IVT::::T::::::::S:::::::::::::::::A:: consensus ILKRYKGYEKSAAEQQVSSEMLLSFAEDLDDFAVIEETYREILEDKLNVDAIEDVLRAIQ #oth ............11...11.1..11.12.23...21.....1.1.1.1232123233323 hla1992 ::::::::::::::::::A:T:::L::G:::::::::::::L:D:R:DAPR:RK:AER:D HQ2928A :::::::::::::Q:::::::::::::E::S::::D:::::::::::::::::EA::N:: HVO_2766 :::::::::::::Q::::::::::::Q:::E:::M:::::::::::::LA::::AIA::R Hbo2498 :::::::::::::Q::::::::::::Q:::G:::M::::::::::::::A:VK::::GVK Hut0475 ::::::::::::S::::N:::::G::Q::E::::::::::::::::::::::::::G::D rrnAC0959 ::::::::::::S::::::::::G:::::G::::V:::::::::::::::G::TI:::M: Hmu1752 ::::::::::::S::::NA::::::::E:GE:::V::::::::::::::G:::::TG::: consensus DGDLAVVTQRVDSPTPRAFGLATLMASDVVLAEDESAVLQEFHARVLAEIDDDEGDVS-D #oth 31223.2544.1..1.1.......41..1...1...12.22..3..421.2133445454 hla1992 ::::::AD:T::::::L:::::::VD::A:::G::::T:RK::D::R:A:::S-----:- HQ2928A :DE:I:E:VE::::S:::::::::A:::::::::::::::::::::Q:::G:E:TASETE HVO_2766 A::VD::G:Q:S::::::::::::T::::::::::::A:R:::E::K:::N:G:S:LGI: Hbo2498 S::VE::ARN::::::::::::::::::::::::::QA:KA::::::D::G:::AVPVD: Hut0475 A:NIE::HH::::::::::::::::::::::::::::::K:::E::TDA:GESA::::VT rrnAC0959 :::VD::RT:::::S::::::::::::::::::::::::::::Q:::N::::GN:ED:AV Hmu1752 T:E:::E:V:::::S:::::::::L:::::::::::::::A::D::::A::::A:E:-:- consensus ------ #oth 432211 hla1992 :::::: HQ2928A TQTSSS HVO_2766 VE:::: Hbo2498 :::::: Hut0475 E::::: rrnAC0959 ATDD:: Hmu1752 ::::::