Home |  Text search
7 genomes BUD1306 7 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3445

HVO_2513

Hbo2169

Hmu2499

Hut0659

hla1794

-

HQ2778A

Pairwise sequence scores
Consensus score1202 Hmu2499 rrnAC3445 hla1794 Hut0659 HQ2778A HVO_2513 Hbo2169
504Hmu2499 1302 292 257 345 278 332 289
536rrnAC3445 292 1205 411 294 348 364 328
623hla1794 257 411 1356 313 376 419 431
555Hut0659 345 294 313 1384 303 421 389
705HQ2778A 278 348 376 303 1273 488 573
768HVO_2513 332 364 419 421 488 1182 597
747Hbo2169 289 328 431 389 573 597 1181

209 symbols
consensus       -MQRSDEREAETS--------------------------EASG-DLDFDLESDLGSETDE
#oth            121112221425422111111111221222213343433434452445242345353434
Hmu2499         MSE:T:DLTI:EEAVD::::::::EVGVGETDASVDGTD::G:L:GG::T:T:F:T:SA:
rrnAC3445       MAE:TE::TRDAD::::::::::::::::::::::::::AK::S::GV:VGTTESV:::V
hla1794         :::P:K::::SDG::::::::::::::::::::DPMDDLDGLLD:DLAGG:EEPDA::GG
Hut0659         MAE:::Q:TR:R:QLDTEELEELLDTGPDSDDVGTGSTE::ISA:A:SG:L:G::DRLGS
HQ2778A         ::::::::::::T:::::::::::::::::::TGSDKSLTG:DQN::::V:::I::DVET
HVO_2513        ::::::Q::S:Q:::::::::::::::::::::::::::----:--VD::L:GVNR:R::
Hbo2169         :::::::K:PS:T::::::::::::::::::::::::::----:------:FS:D:V:::

consensus       AVGAERSAASSG-RGRL---GRLFSPRAFALALLASGVGAFVGG-AIPLVG-TIGRFVGI
#oth            45452433622344314221243114241332223233142321232.2221222543.2
Hmu2499         TEV::PATDTG:L:::A:::ADA::VTS:::Q:VGAL::T::V:G:L::GP:-LSGV::V
rrnAC3445       :::ES:G:E::VTETSTTDS:SY::L::LLF:FG:V:G:MVL:::L::::P:-FTEL:::
hla1794         :ATV:S::G:A:NA::IGVS::W::AK::::::VTV:::M:::::L:::I:G:::TAG:V
Hut0659         M:TRTI:RPFA:I:S::::::Q:::V:T:GV:::::I:A::AFAFV::F:D::L:AIA::
HQ2778A         DF:S:VASKT:E:DN:-:::-::PTI:SLVFVIV::AI:FLG:::SV:II:::::Q:L:L
HVO_2513        :TQ:::::S:G::G:::::::G:::::V:LA:::L:IG:LL:::::::::::F:::::::
Hbo2169         SSATSSNS:T:N:ES:::::AG::::KL:VVVF:::LL:::L:::S::I:::F::::L:L

consensus       FAVGFVLGLVGSRRRYAEVGLAGALAGGLLAVLSTL-----FAPFAVELLADYGLAIAGA
#oth            2233124.2233333.3.4221.232322441232133211231332541254.532433
Hmu2499         L::L::::V:STEA::::A:A::V:V:V:TT::G--:::::----SIT:SVVS:GLVPV:
rrnAC3445       LLG:::Y::LA:E:::::L::::G:S::AT::::--:::::LL:QLAAG:S--:TRLFAI
hla1794         :LAA:L::::V:T:::V:T:I:::A::ATS::T:V:GVG:::L:IGIDY:SQW::PLVAV
Hut0659         ::::LGF::::E::Q:L:::::::T:AA:G::MD--:::::---:L:VA::GR:DL:LLF
HQ2778A         :ISS:LI:AI:::G::::SAIG:G:VT:T:LL:G::TSV:::T:::::F:::::I:::::
HVO_2513        A:A:::::V:::K:Y:T::V::::I:A::AF:::::FAV::::::::Q::::::V::::V
Hbo2169         :::::GV::LSG:SH:V::::G::::F:::W::T::TSGFA::::::::::K::::::::

consensus       GGGVGLLAALVGHYFGRDLRSGLTRDI--
#oth            1223.223222...2.....4...31111
Hmu2499         ::VA:G::::::::A:::::E:::::L::
rrnAC3445       A:::::VL::::::::::::::::K:L::
hla1794         ::::::VL::L:::::::::A:::E::DG
Hut0659         :V:S::::GVI:::V::::::::::::::
HQ2778A         :V:L:SII:V::::::::::::::K::::
HVO_2513        :AAS:G::G:::::::::::N:::QEL::
Hbo2169         :A:::::TTII:::::::::D::::::::