| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 2136 | HQ2440A | hla1747 | Hut1279 | rrnAC0777 | Hmu0752 | Hbo3118 | HVO_1714 |
| 1431 | HQ2440A | 2165 | 1197 | 1197 | 678 | 1164 | 1249 | 1202 |
| 1578 | hla1747 | 1197 | 2139 | 1276 | 771 | 1370 | 1339 | 1352 |
| 1557 | Hut1279 | 1197 | 1276 | 2174 | 772 | 1399 | 1297 | 1366 |
| 957 | rrnAC0777 | 678 | 771 | 772 | 1199 | 856 | 769 | 744 |
| 1667 | Hmu0752 | 1164 | 1370 | 1399 | 856 | 2102 | 1308 | 1391 |
| 1627 | Hbo3118 | 1249 | 1339 | 1297 | 769 | 1308 | 2599 | 1445 |
| 1664 | HVO_1714 | 1202 | 1352 | 1366 | 744 | 1391 | 1445 | 2119 |
365 symbols consensus VS---RDAP--ASPLVGLGIAVLAVSTSAILIRWSAAPSLVAAFYRVLFTTALLAPVALA #oth 223343244223315321421231213211121315113413121112212421312244 HQ2440A MGVSV:R:TDAIP:V:A::::I:::::::::::Y:S::T::I:L:::::::V::L:F:VH hla1747 M:TNL:---::V::A:::V:::T:::GG:::V:L:D:::S:::::::::::LP:V::::W Hut1279 ::RSFV:RIES:P::A::SV:::::::::::::::::::I::::::::L::L::::::WW rrnAC0777 --:::----::------------------------------------------------- Hmu0752 :::::-:SV:::R:RLA:AV::V:I::::::::::T::PV::::::::L::::::::L:: Hbo3118 :::::::P:::V::F:::VV::::::A::::V:Y:E:::::K:L:::V::VS::::::F: HVO_1714 ::TPDS:::::I:::A:::::::::::::::V:::::::::K::::::::V::::::::V consensus RHRDALARLSRRDLLAAGLAGVALAAHFAAWFESLAWTSVAASVTLVQSQPLFVAAGAWL #oth 242433462432223424431211141113111113212111111211312311262132 HQ2440A SY:::FYQ:::::WI::SA::::::L:::L:::::::::::::::I::I:V::::S::A: hla1747 :Y:TQ::GIT:Q::IF:T:S:I:::L:::::::::N::::::::::::A::V:::L:::: Hut1279 :Q:S:FR::AW:::AGGA:::::::I::::::::::::::::::::::::::::::A:P: rrnAC0777 ------------------------------------------------------------ Hmu0752 ::A::VGD::G:H::::::T:::::::::::::::S:::::::::::::::I::VT:::: Hbo3118 :S:EE:RE:P:::::W::V::::::V:::S::::::::::::::::::A::::::I:::A HVO_1714 :::::::TI:G:::::::G::::::::::S:::::NH:T::::::::::::::::V:::A consensus LLDERVTRRTAVGIAVALAGIAAMSLGDLL-----------------------GGGTV-- #oth 31411234244313421331236.13222211111111111111111111112.355311 HQ2440A F:S::I:::AS::MMI::C:::I::F:GTI::::::::::::::::::::::V:AP:::: hla1747 ::R::::S:MT::::::V::MM:::::::::::::::::::::::::::::::::VL::: Hut1279 ::::::GP::VA::V::V::::G::AA:::::::::::::::::::::::::::V:VL:: rrnAC0777 -----------------------::V:E::::::::::::::::::::::::::S::::: Hmu0752 ::N::::G::VL:VV::I:::VV::::::::::::::::::::::::::::::::TA::: Hbo3118 :::::I::GV::::::::F:M:T:T::::FIPDIARALAVLPGLESLATLSTA:SAETTL HVO_1714 V:::::S:::::::G:::::M:L::VS:F::::::::::::::::::::::TA::---:: consensus -GPRPLYGNALALVGAVMAAGYVLAGRSLRQRIPLIPYVTVVYGVCALALLALVLARGHP #oth 1132.11.12..2211231.1...1...2.1.32.2...21..2.1334..233324132 HQ2440A ::AA:::::I::I:A::CM:::::T::::::::::V:::VI:::::VVV::::TT:VNDT hla1747 :::::I:::G:::F::I:::::::::::I:::VA:::::V::::::T:S:::I:::E::A Hut1279 :::N:::::::::L::LAM:::::::::I:::LA:L:::I:::T:ASMT::V:LGLQ:A: rrnAC0777 ::Q::::::::::::G::::::::::::::::F::::::::::::A:VC::VF:V:S::: Hmu0752 :::::::::::::::GL:::::::::::::::L::L:::::::::A::::::V:::Q:L: Hbo3118 A:EA::::D::::::::T::A::::::::::::S:::::::::T::::V::GFT:::::: HVO_1714 :A::::L::G::V::::T::A:::T:::V:S:VS:V:::V:::S:::A:::VVAVG::D: consensus LTGYPPREWLLFLGMAVGPGVFGHTVLNWALAHVESSVVSVSLLGEPVGSTILALVLLAE #oth 122.222..31.321.1...21...12..1.1111..2..11..1..21113..231.3. HQ2440A :FA:::Y::F::IL::L:::IL::::::::::::::::::::::A:::C::V::V:::S: hla1747 ::::::S::AI:V:L:::::LL:::::::::::LK::::::::::::::A::::F:F::: Hut1279 :VA:::::::::::::::::::::::V::::G:L::::::A::::::L:::V::::::G: rrnAC0777 V::::::::A::FA:::::::::::::::::::::::M::::::::::::AL:::L:::: Hmu0752 ::::ES::::::::::::::IL:::LV::S:::::::L:::T:::::L::AL:::L::T: Hbo3118 :FD:AA:::V::VA:::::::::::::::::GY::::::::::::::I:::A:::I::S: HVO_1714 ::::::::::::::::::::::::::I::::::L:::::::::::::::::::::F::G: consensus IPTPFTVAGGAVVLIGIGLTARRRQ----------------------------------- #oth 3.255.34..111.3..4222343432212221111111111111111111111111111 HQ2440A L::R::AI:::MT::::II:S::--::::::::::::::::::::::::::::::::::: hla1747 A::A::L:::::::G::::::TESRA:::::::::::::::::::::::::::::::::: Hut1279 ::GVA::V::V::::::VV:::A::Q:::::::::::::::::::::::::::::::::: rrnAC0777 ::G:S:::::::::V:::VV::S:SVGAAPAD:::::::::::::::::::::::::::: Hmu0752 V:SSW:::::::::A::T::::SSE::::::::::::::::::::::::::::::::::: Hbo3118 ::::M:IF:::::::::Y::TV:K:ADEAVETRQMLLVRRLTDARLPSRLPILILVSKLI HVO_1714 :::LP::L::::::G::YVS:S---::::::::::::::::::::::::::::::::::: consensus ----- #oth 11111 HQ2440A ::::: hla1747 ::::: Hut1279 ::::: rrnAC0777 ::::: Hmu0752 ::::: Hbo3118 FQSQR HVO_1714 :::::