7 genomes BUD1322 11 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0152 HVO_A0368 Hbo3722 Hmu2289 Hmu2712 Hut0494 Hut1431 Hut1967 Hut2989 - NP6130A HQ1078A

Pairwise sequence scores
Consensus score	738	rrnB0152	HVO_A0368	Hut1431	Hmu2289	Hut0494	Hmu2712	HQ1078A	Hut1967	NP6130A	Hbo3722	Hut2989
491	rrnB0152	759	568	553	395	396	327	326	351	389	370	335
559	HVO_A0368	568	738	608	428	397	369	361	387	400	379	362
544	Hut1431	553	608	741	423	429	348	359	385	404	388	363
468	Hmu2289	395	428	423	778	542	399	371	335	404	397	348
453	Hut0494	396	397	429	542	748	376	371	300	396	367	320
456	Hmu2712	327	369	348	399	376	747	672	337	405	343	356
456	HQ1078A	326	361	359	371	371	672	743	328	381	344	376
507	Hut1967	351	387	385	335	300	337	328	758	481	426	411
529	NP6130A	389	400	404	404	396	405	381	481	784	466	451
483	Hbo3722	370	379	388	397	367	343	344	426	466	754	566
491	Hut2989	335	362	363	348	320	356	376	411	451	566	751

99 symbols
consensus       -----SDDEWTWELSSRAERQFDGLDEHAQDRIVSKLDEIVTSEWRDPDDYLEPLTGAPF
#oth            112363433.2.412441433255.353513.151..111.314.11.4112...212.3
rrnB0152        :::MT::A::::KFTE::TE::GD::T:V:::V::::::V:D:T:HE:K:F::::::G::
HVO_A0368       ::::V:EED:::KF:P::AN::K:::T:V::::::::::::D::::::::FV:::::G::
Hut1431         :::MP:S:D:::AFT:Q:AD::EN::A:V::::::::::V:G::::::::F::::::G::
Hmu2289         MGPTT:N:G:D::F:P:::N::SQ:GSDS:Q::ID::E:V::::::::::F:::::NS::
Hut0494         ::MTSD::A:D:AF:::::D::AQ::DDT:Q::MD::::V:S::::E:G:::::::NS::
Hmu2712         ::::M:::G:::::::K::NDL:::SPAD::::LD::::::S:P::::P::G:::QNS:H
HQ1078A         ::::M:::G:::::::TT:DDL:::SPAE::::LD::::::S:P::::P::G:::QNS:Y
Hut1967         :::::MSE::::Q:RAP:K:TY:D:::::RS::TD:::D:::DR:::::::::::::::H
NP6130A         ::MPA:::::D:R:TDP:::EYEK:QP:E:E:::::::::::DQ::::S::::::::::H
Hbo3722         :::::MS:D:R:::TDT:::::GS:::Y:RE::A:::::::DDQ::E:S::::::Q:::H
Hut2989         :::::-MS::D:::TDT:R:D::::::::R::::::::::::DQ::::PE:::::H:::N

consensus       SKLRIGQFRLGCRLDQDDQILEVHRIEKRGGA-YTADDD
#oth            3.1.1.61..2253542445.5142123.4.11.231.1
rrnB0152        W:::V:TY::A:V:AH:ASV::I::::H:S:::::::::
HVO_A0368       :::::::Y::A:V::Y:ES::::::::H:S::::::::-
Hut1431         ::::V::Y::A:V::RESSV:::::::H:S::::::::-
Hmu2289         Q:::V:GY::::::MR:SKM:R:ES:R::E::::KG:::
Hut0494         K:::V:DY::::::LDEKRL:R:ESVRA:D::::::::-
Hmu2712         K:I:::G:::SVTFR::::R:V:A::KR:D:::::::::
HQ1078A         K:I:V:E:::SVSFR:::GR:V:A::KR:::::::::::
Hut1967         :::::::::::AEC:H:::V:DIYT::R::::::KPG::
NP6130A         ::::::A:::::KAV::::::W:YT::::P:::::P:::
Hbo3722         Q:::::P::::::A:R:KK::Y:L::R::::DA:RG:::
Hut2989         Q:::::P::::::A::AEGA:Y:L::R::::DA:RS:::