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7 genomes BUD1326 7 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1915

HVO_0784

Hbo0750

Hmu0665

Hut0550

-

NP0912A

HQ1162A

Pairwise sequence scores
Consensus score1970 HQ1162A HVO_0784 NP0912A Hbo0750 Hut0550 rrnAC1915 Hmu0665
1152HQ1162A 2448 862 831 1016 719 836 697
1235HVO_0784 862 2508 836 930 745 820 897
1033NP0912A 831 836 1905 769 728 673 680
1286Hbo0750 1016 930 769 2409 701 915 890
1099Hut0550 719 745 728 701 2036 952 903
1310rrnAC1915 836 820 673 915 952 1991 1057
1260Hmu0665 697 897 680 890 903 1057 1983

353 symbols
consensus       MPRWAAFAGLTGLVLAGLLALARASQGALSADG-----------------D-PSRTRAG-
#oth            123.11.11122432532141132122234423111111111111111113333344332
HQ1162A         ::Q::T:V:F:FIIT::::V:SH::R::INTTS::::::::::::::::::MDAS:I::D
HVO_0784        :TD::::::F::::::V::S::HF:R:VPH:E:TGSDALDAPAAPGDGAS:SD::AT:AD
NP0912A         :T::V:::A::AA:VGVM::A::::TR:::TTD:::::::::::::::::-:TAD:A:::
Hbo0750         ::Q::T::AFA:V:TV:::L:SY::::VV:P:::::::::::::::::::ER:P:D:S:P
Hut0550         VT:::::V::::V:VSLVVV::FLT:RL:D:E-:::::::::::::::::-:::AR:ST:
rrnAC1915       ::E::::V::::FL:TA::G:::L::::VRS:::::::::::::::::::G:V:S:VD::
Hmu0665         VA::::::::LA:S:FL:::::::::S:::G:D::::::::::::::::::::V:F:EP:

consensus       ------------------------------TPLTPRP-DPETPREA-------QRA-AQR
#oth            333233321233231323233333232233455524352354334433443354345445
HQ1162A         ITQNQTEDSEPRSHSYQDHVAEELSEPVITATH:ESDSNA:QNN:SDTHDTVGPTQSSTK
HVO_0784        DSVPTAAESDETDWSAELDTVSLASFSVDS:GAS::::E:S::A::DVVGDAHADVD:GP
NP0912A         ::::::::::::::::::::::::::::::LESL:DGA:HLDATT::::::::---:-E:
Hbo0750         RRNNAHPESDDDDSSSESDAGRSHQNPDAE::::DA:V:G::NTGVVSASDAR:::EQ:Y
Hut0550         ::::::::::::::::::::::::::::::VR:Q:TGL::AVT:SRWVRVRPAG:STPTG
rrnAC1915       ::::::::::::::::::::::::::::::VSMAD:-:::TI::FE::::::T:::A:::
Hmu0665         ::::::::::::::::::::::::::::::S:RD:::T::VV::FE:::::::---:---

consensus       QTDRDRASP------------------ARLSTGALLANVALSQGLFGAVLLAGAWYASIP
#oth            5542433414333233332331322225421142.12.123111211431441133251.
HQ1162A         T::HIVP:GDTAIADVKHADDEHESYQT::::I::::::TI:::::AML:IS:::I:R::
HVO_0784        ES:S:::T:PGVTAAPVSAVSERSASAED:PPHL:::::::::AF::GF:GL:::::GV:
NP0912A         :HPSSTP::::::::::::::::::::DA:P:Q:::L:L:V:H:FLA:::A::I:L:NV:
Hbo0750         DP::ELVM:KSGVRYRPPPPEET::::PE::::T::V:::F:::::ALA::G::::TQV:
Hut0550         G:TSP:::::::::::::::::::::::SIP:V::FV::V:T::V::G:::V::LVF:::
rrnAC1915       :QM::TLA:::::::::::::::::::SDV::::::::::FT:::::VL:V:::F:FE::
Hmu0665         ---:PV:D:R:::::::::::::::::::::P:::::::VVT:::::::VVGA:V:F:::

consensus       ASAFGVGAAALSAGLPAVAVGIGLGIALWIGNEVASAVADAFGVDPDEALRELLAPDTTG
#oth            3211.335433544322222.214.3222421232331234423342141.33.1.3153
HQ1162A         V::::::MGPTK:LI--L:L:V:T:VI:Y:::::G:GLGAH::::NG:T::SA:::E:SR
HVO_0784        :A:L:LS::D:PTQ:---:::V:::L::YGA:R:G:T:SER:::A::::V::S:T:R::A
NP0912A         LASL::::GPVTGSI-:::::LAV:A:IAVV:TLL:V::SRLN:::S:Q::S::::E::L
Hbo0750         :::::A:TE:F:--VSGLF::VA::L::YAV:::GA::GS:Y:LGRS:Q::Q:::::SNA
Hut0550         L::::::P:S:G:LA:::GL::::::G::::S:L:V::::WADI:Y:QGV:AM:T:T:R:
rrnAC1915       ::::::TSD:::T::::::I:::A::GF:V:::G:A:L::G:::TF::S::::::::SP:
Hmu0665         PW:L:IPET::AR:::G::::::F:V:::LA::A:G:::::T:AGY:::V:::::::SL:

consensus       GWVLLLGVVLPIIAGFEELLFRGALIGVFAAGFDVSPWLLAVVSSLAFAAGHGAQGRLGI
#oth            2.14.24121.31.32..22..1111.1412.23311.21.211.22.121......3.2
HQ1162A         :::V::C:::::::::::::::::::::I:T:YN::::I::::::::::L:::::::I::
HVO_0784        :::F:FA:A::L:::::::::::::V:AV::::::::::M:A:::A::G:::::::::::
NP0912A         D:A::CF::F::V::::::::::I:V:A::V:::L::::::::::AL::::::::::::V
Hbo0750         :::A::L:I::::::::::::::::V:::::::GI:::::::I::::::L:::::::::V
Hut0550         E:::::::::::V:AS::FI::A:A:::P:::L:A:::A:::::::::GVA::::::A:V
rrnAC1915       :::I:::G:::V::IV::::::A:A:::PV::LNAPA:AM:I:A:V:::L:::::::V::
Hmu0665         ::::::::A::TV:VV::VV::::A::AM::::S:::::::::::VV:G:A::::::V:M

consensus       VVTGVLGFVLAAVFILTNSLLVVVVAHYLVNALEFLVHEGLGIDRL-------
#oth            31..41.11..2311213..12.21...22.12.1311.32133345422211
HQ1162A         A::::F::::::::::S::::I:II:::IM:::::I::::FD:ELYPVSDM::
HVO_0784        I:::L:::::::A:V::E:::::::::::::::::AG::LF:W---:::::::
NP0912A         :A:::::::::::::S:G:::::A::::V::VV::::A::::WTP-:::::::
Hbo0750         ::::A:::::::G::::E::F::::::::::::::V:::A:D::LRS::::::
Hut0550         :::::::LA::S:Y:A:G:::::I::::VL::T::::::RR:V:PIAG:::::
rrnAC1915       ::::T::LA::GL::A:::::A::::::::::::L:::::::V:::WA:::::
Hmu0665         L:::G::LA:::G:V::D::::::::::::::::LA::::::Y:::TIETLID