|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 1884 | rrnAC1939 | Hmu0515 | NP5240A | HQ1403A | hla2701 | HVO_0595 | Hbo0917 |
1453 | rrnAC1939 | 1870 | 1454 | 1355 | 1312 | 1285 | 1318 | 1321 |
1476 | Hmu0515 | 1454 | 1870 | 1379 | 1313 | 1347 | 1318 | 1328 |
1560 | NP5240A | 1355 | 1379 | 1860 | 1304 | 1368 | 1377 | 1419 |
1551 | HQ1403A | 1312 | 1313 | 1304 | 1881 | 1384 | 1511 | 1512 |
1585 | hla2701 | 1285 | 1347 | 1368 | 1384 | 1859 | 1460 | 1513 |
1642 | HVO_0595 | 1318 | 1318 | 1377 | 1511 | 1460 | 1885 | 1662 |
1703 | Hbo0917 | 1321 | 1328 | 1419 | 1512 | 1513 | 1662 | 1882 |
257 symbols consensus MVEAFAVASGKGGTGKTTSTLALGMALAEEYDVTVVDADTGMANLLFHAGLDDAETTLHD #oth ...11.............1.1.......231....1........1...1..3.122.... rrnAC1939 :::V::::::::::::::::V:::::::DR:::::::::::::::::::::S:::::::: Hmu0515 ::::::::::::::::::::::::::::::::::::::::::::M::::::A:V:::::: NP5240A ::::I:::::::::::::A:::::::::::::::::::::::::::::T::G:::::::: HQ1403A ::::::::::::::::::::::::::::AD:::::I:::::::::::::::::V:I:::: hla2701 ::::::::::::::::::::::::::::::H:::::::::::::::::::::::TV:::: HVO_0595 :::::::::::::::::::::::::::::::::::I::::::::::::::::::DV:::: Hbo0917 :::::::::::::::::::::::::::::T:::::I::::::::::::T:::::DV:::: consensus LLVEG-DAPVEAATYDRFGMSVVPCGTSLAAFEAADPGRLRDVVAELAADTDVLLLDSPA #oth 1.3323222112.1.1...11........12.11.1.31..2...2..21..11....11 rrnAC1939 V:AA-:::::::::::::::T::::::::DG:RD:::::::::::A::E:::II:::::P Hmu0515 V:AA-::::::::::E::::T::::::::DD:RD:::T:::A:::D:::E::I:::::A: NP5240A V:::::G::::::::E:::::::::::::::::::::E:::::::A:::::::I:::::: HQ1403A ::LTDC:L:AS::V::::::::::::::::D::::::TV::::::D:::::::::::::: hla2701 :::::TATA:SE:::::::L::::::::::G::::E:::::E::::::S::::::::::: HVO_0595 ::IDDH::A:SD:V:E:::L:::::::::::::::::::::::::::::::::::::::: Hbo0917 :::::H::S::D:V:::::::::::::::::::::::A:::E:::::::::::::::::: consensus ALGSKSAVLPIVLADRVVVVLQPTVPALSDGLKVQEYARSYGTDTAGVLFNRVRPDEDIE #oth 1.1.11....1.....111112..1.11..1.......32.1.221.22..1.1422332 rrnAC1939 ::D:RT::::::::::I:::::::I::I::::::::::TT:D::V::L:::K::ES:S:: Hmu0515 ::D:R::::::::::::I::::::I:::::A:::::::T:::::V::L:::K:HD:DA:D NP5240A T:D::::::::::::::::::N:::::I::::::::::L:::::I::TV::::H--G::: HQ1403A ::::::::::::::::I:II::::::S::::::::::::A:::V:G::I:::::Q:::VA hla2701 ::::::::::V:::::::::VE::I::::::::::::::::::E:::::::K::--D:AA HVO_0595 ::::::::::V:::::I:::::::::S:::::::::::H:::::::::V::::::::NV: Hbo0917 ::::::::::V:::::::::::::::S::::::::::::::::E::::::::::::::T: consensus DIAEQAERYFDGPTLASVPESDAVRAARRAGEPLLAHAPEDPAADAFRAAAARLDVRDGD #oth 412111311.2.31..2..2.121.2..12.2.......3321.42113..241223212 rrnAC1939 QVS:KT:::::::::::::::ERA:E:::::R::::::::CE::T:Y::::EA:T:QN:T Hmu0515 E::AKT:Q::::::::T::A:E:A:E:::::R:::::::SS:P:TS::R::T:I::::RG NP5240A :VRAK:::::E:::::T:::::SA::::A::::::::::A::::E::::::EG:SPA::: HQ1403A T:::::T:::::R:::T::::::::M:::V:K::::::::TT::S:::S:::T::IH::: hla2701 :V:::::QR:G::V::N::D::::::::::::::::::::SEP:ARY:R::::::::::: HVO_0595 T:::::G:::G:Q::::::::::::::::E:K:::::::D::::::::E::::::::E:: Hbo0917 N:::::S:::G:T::::::::::::::::::::::::::::::::::YE:::N::::::: consensus AAAVADRFRSAVIPDRP #oth 3431.1..22..2.133 rrnAC1939 ::DA::::Q:::::ESL Hmu0515 SE:::::::::::::S: NP5240A EG:::E:::T:::::P: HQ1403A :IG::::::N::V:E:L hla2701 EG::::::::::V::T: HVO_0595 GRE::E::K:::V:E:I Hbo0917 ::G:::::::::L:::V