| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 1719 | Hbo0301 | rrnAC0856 | Hmu1539 | HQ1806A | HVO_1245 | NP2536A | hla1459 |
| 1006 | Hbo0301 | 1713 | 721 | 653 | 841 | 845 | 451 | 552 |
| 942 | rrnAC0856 | 721 | 1702 | 883 | 634 | 735 | 480 | 508 |
| 957 | Hmu1539 | 653 | 883 | 1634 | 610 | 713 | 477 | 571 |
| 1103 | HQ1806A | 841 | 634 | 610 | 1768 | 857 | 544 | 540 |
| 1108 | HVO_1245 | 845 | 735 | 713 | 857 | 1749 | 544 | 605 |
| 781 | NP2536A | 451 | 480 | 477 | 544 | 544 | 1602 | 565 |
| 875 | hla1459 | 552 | 508 | 571 | 540 | 605 | 565 | 2819 |
387 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hbo0301 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0856 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1539 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1806A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1245 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP2536A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1459 MADAVLLAQSVGVDGDAGRRDDEEAAEMHQLAAHILDLACEPRGEFVEVAVDGQHEGVAV consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hbo0301 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0856 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1539 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ1806A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1245 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP2536A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1459 VDAADPLVGVGRPVEDAEDDIAGGRERLVHLLFGVAQVEVPVAHTTGLRGGGKNVRTREF consensus ---------------SMRRTRRSYLAATGGAGGAALAGCLGGGS---------G--GSDS #oth 1111111111111234346...311142322334231..222322111111121343214 Hbo0301 :::::::::::::::-::T::::::::A:::LA-:T::::::--:::::::::-::-::: rrnAC0856 :::::::::::::::MT:F:::GL::::V::V:-:M:::A::S::::::::::-::E:E: Hmu1539 :::::::::::::MDEHSP::::L:-LA:::AA:S:::::DSS:::::::::G:SEQP:G HQ1806A ::::::::::::::M::QS:::K:I:MI:AV::G:MT:::::NTN:::::::A:GT:N:V HVO_1245 :::::::::::::::-::N:::A:::::A::LTLGT::::::::::::::::::GS:N:A NP2536A ::::::::::::::M:PDL:::G:::V:AA:::::::::-----:::::::::-::-::D hla1459 AASRGAIKCAPTPAGV:E:::::L::G:MSI:VVGA::::::::DGNDGGNDG:ND:::: consensus TGAD------DCDVGEPDTVDSLPTPVAGDEDADVTVAVFEDFACPHCATFNLEVAPQIR #oth 4355111111423334435443331.231322.2.1.312..12.11.11134323.423 Hbo0301 QSKP::::::S:E::DLEQ:K:::::TL:P:::::::D:Y::::::::::Y:VD:F:KVK rrnAC0856 A:ET::::::ETATPT:APGQP:S::::::PE:::::::Y::Y:::::::YSES:Y::V: Hmu1539 :ATV::::::--------:TG:IS::::::PE:::::::Y::::::::::::Q::Y:D:: HQ1806A ::PL:::::::::::AI:R:S:::::TR:SD::P::::::::::::::Q::S:::::K:V HVO_1245 VA:I::::::G:E:P:R:::S::::::I:S:::S:V:D:W:::::::::::AVD::::L: NP2536A VT::::::::------::AI:DADR:AL:A:N:P:::T::::YG::A::R:KAQAL:ALI hla1459 S:V:LDLGQY:::LT::ENP:LDYR::IV:PE:::V:QA::::T:G::::YK::HF:T:: consensus SEYIDTGAVRYEHHDFPIPVDEAWSWPAASAARAVQDRAGDEAFFDFASRLYENQGELGG #oth 33.235.411.323...1..2262135212.1.2.3243123111512533124.23234 Hbo0301 QN:::::KI::RFF::::::SKQ:::GG:I::::::::TD::TY:KY:K::F:K:N::TS rrnAC0856 ED:LTD::I:::F:::::::::DA::Q::::::::::NV::G:::TYSE::FA::NQ::P Hmu1539 :::V:S::I::::::::L:::QSV:LE:PN:::::::GV::::::EY:DL:F::::S::P HQ1806A :N:VEQ:D:Q:QYF::::::S:-:::R::::S:::H:K:::K:::::ITSV::Q:S::NT HVO_1245 :::VSE:I:::R::::::::::W:::KG:::::::::E:D::T:::::HT:::::S:F:: NP2536A DQ::E::E:::L:A:::::::::::H:V:N:::E:FFE::ND::WL:S:SI:DH::SYSL hla1459 E::::P:E:::::W::::::N:T:AV:V:::::G:GA:Q:A::::S:::TA::S::NYS: consensus ----DGYATIHDLAADADADGCAVAAAADQEAYRPTIEADRQRGID-RGVDGTPTIFVNG #oth 1111353443424244523123414121643412342432.44122141332..123112 Hbo0301 ::::N::TV:::V:NEF:V:::E:M:SVE:DI::SVVKS::::::E:VDIG:::A:I::: rrnAC0856 :::::T::---::TEGI:I::ET:R:::TG:L::::VSG::EA:::::::Q:::AVY::N Hmu1539 :::::R::---S::REV:::PST:KT::VEQ::EA::::::EG::::A:::R:::AL:D: HQ1806A ::::N::QIV::I:SPTEV:D:F:::S:K::P:::V::DT::Q:V::::::S:::::::: HVO_1245 GDAEGSLS:LQS::::::L:::S:::::SR:R:::LV::E:TEAV:E::FQ::::VLID: NP2536A :::::AIE:VAADV::DE:V:A:AR::::E::HSER:A:::D::ES:W::G:::AV::DE hla1459 ::::---EA:GAA:EA:G::P::AI:D:QFS::EEASMS::SE:ES:M:LA::::::::: consensus EAV--SDPSWETVKAAIEAAL------ #oth 261112435225253112433323211 Hbo0301 :HL:::GAG:::::NG::GH:KSASKS rrnAC0856 :R:EW:EV:Y:P:R::::::RSDG::: Hmu1539 :K:::-EA:Y:ALS:::D::QSDST:: HQ1806A IP::::R:D:SS::S::::EFY::::: HVO_1245 :Q:::-A:R:SDLQR:V:N:R:::::: NP2536A TE:::-::AYDEIDS::QDR::::::: hla1459 :::::A:YQA::IA:::DE::::::::