| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 2444 | hla0084 | HQ2040A | HVO_0881 | Hbo0658 | NP0348A | rrnAC0630 | Hmu1034 |
| 1688 | hla0084 | 2310 | 1882 | 1319 | 1321 | 1260 | 1207 | 1226 |
| 1624 | HQ2040A | 1882 | 2376 | 1251 | 1285 | 1208 | 1188 | 1208 |
| 1866 | HVO_0881 | 1319 | 1251 | 2499 | 1776 | 1400 | 1481 | 1456 |
| 1842 | Hbo0658 | 1321 | 1285 | 1776 | 2448 | 1353 | 1435 | 1488 |
| 1703 | NP0348A | 1260 | 1208 | 1400 | 1353 | 2491 | 1484 | 1459 |
| 1766 | rrnAC0630 | 1207 | 1188 | 1481 | 1435 | 1484 | 2429 | 1753 |
| 1774 | Hmu1034 | 1226 | 1208 | 1456 | 1488 | 1459 | 1753 | 2419 |
340 symbols consensus ---M--MDRLGRLALVV-VAAVGAVVGWVLFYRLPNTLADLAGVVLVVVAVVAGLRIGGR #oth 1122344424415633252333332311431454245423.3141322322222432123 hla0084 :::-:::E:NP:-----:----------------S:GKNL::AA:IGAT:T:::K:LVA: HQ2040A :::-::::::YKSDMK-:------------:DADD:RP:L::AG:MGA::T:::KQ:VAQ HVO_0881 ::VTDSFT:VY:::I::VL:V:::A:::I::::V:D:::::::LL:FIGT:::A::V::: Hbo0658 :::-::::::::FTI::S:::LAG::::F:::I::EDVTS:L:IL:::AT:LG:TV:::: NP0348A MQT:SRIATAS:VV:G:F::::V::A:::I:IEV:T:M:::V:::F:I::ATV::::::N rrnAC0630 ::::AGA:DIV:GL:::L:VGI:T:L:::::V:T:DN::Q:F::L:::AVA::TA:::SN Hmu1034 ::::STTRTV:::S::AA:TV:VG::::LA::V::GS::::L:::F::::::::VKL::S consensus LARSRLPD---YNVAEVAVEGPISRDGGGGSPLSRPGGASADDIVEQIEAADDDDAVEAL #oth 11413323211111.11211...3..2.22433223123511.1..1123.13.44211. hla0084 :T:G:FGETEE::T:K:T:S:::R::T:RP:::::A:::T:::V::::::::E:ED:::: HQ2040A :T:G::G:AEE::::K:IIS:::Q::R:RP::::AS:ASA::::::R::D::::::I::: HVO_0881 ::A:AF::::::D:::::::::::::::::PVPG:G::TP:::::::VD::A:::S:D:: Hbo0658 I:S::YS:::::D:::I:::::::::::S:RLPT::::::S::V::::QT:A::G::DG: NP0348A I:T:LA:G:::::::::::::::T::::::M:::P::SPG:::::::::D::A::N:::: rrnAC0630 I:G:L::A:::H::::::::::::::::::-IT:P:V::::::::::::R::S:RGS::: Hmu1034 ::G:I::G:::::::::::::::::::::S-LA:P:V::R:E:::::::R::::S::D:: consensus LVELNTPGGEVLPSDDIRRAAADFDGPTIAYATDTCASGGYWIASGCDELWARDGSIVGS #oth 112......111..1...2.124.....21.1..2......1..1....2.1122.21.. hla0084 V:::::::::::::::::::::::::::L:::::::::::::::::::::::::A:L::: HQ2040A :::::::::::::::::::::IE::::::::::::::::::::::::::M::::V:LI:: HVO_0881 ::K:::::::::::::::::V:::::::V::::::::::::::::::::::SH:V:V::: Hbo0658 ::R::::::A::::::::::V:E::::::::::::::::::::::::::I::H:V::::: NP0348A :LR::::::A:V::::::L::EA:::::V::T::A::::::::::::::::::R::V::: rrnAC0630 :LK:::::::IV::E:::I::EQ:::::::::::V::::::D::A::::::::E:::::: Hmu1034 ::::::::::IV::E:::L::ER:::::VG::::V::::::D::A::::::::E:::::: consensus IGVIGSRVNAAELADRLGLSYEQFTAGEYKDAGVPLKEIEADEREYLQGIVDDYYDQFVE #oth ...2..121131.1.12.21..111..21.1..211214332..1...111.1..11.11 hla0084 :::V:::P:::G:::K::I:::::::::::::::::R:::E:::::::::I:G::E:::: HQ2040A :::V:::P::SG:::K::I:::::::::::::::::R:::DG::::::S:::G::::::: HVO_0881 ::::::S:::S::::KV:::::R:A::K:::::MA:::PTE::::::::LI:::::D::: Hbo0658 ::::::S::VH:::::::V:::R:A::K:::::TA:::PS:::::::::L::::::D::: NP0348A :::R:::MT::::L::A:VE:::L::::::E::::FDDLGD:::Q::::::::::::::: rrnAC0630 :::V::::::K:::::V:::::::::::::::::::::MT::::::::S:::::::::ID Hmu1034 ::::::::::K:::::V::::::::::TF::::T::::F:QE::::::S::::::E:::D consensus TVAEGREMDPEAIRDTEARVYLGSEAHELGLVDELGTRDDVEDRLEERLG-EEVEIREFE #oth 1.1...111143211...111..32.4.2..1.31.1211.3221133112331225122 hla0084 ::S:::D:::::::E:::::::::D:A:I::::::::E:::::::::LID:T:P::H::T HQ2040A ::S:::D::::Q:::::::I:::ND:L:I::I:::::E:::K::I:NLID:A:P::Q::K HVO_0881 R:::::D:::QVV::::::::::E:::::::::S::S::::::::A::::RD::SV:::T Hbo0658 R:::::::::D:::::::::::::R::::::::::::::::L:::AA::DV:S:SV:::T NP0348A ::::::::E:S:V:E:::K:F::E::F:R::::D:::K:E:CE::::V:::T:::TT:L: rrnAC0630 :::::::::A::LK:::::IF::D::E:R::::R::::::::AS::Q:::::D:T:K:Y: Hmu1034 :::::::L:AAE:::::::IF:::::::::::::I:::R:::AK:::Q::::P:TVEA:: consensus PERGLAERLRGGAERVAFALGAGVASVFDGDGGDFSFRL- #oth .432.241.32.2132.1.2.1.2.132252533321132 hla0084 :K:::::::GI::::::::A:S::::::TNE:::VDVE:R HQ2040A :N:S:::::SI:T::I:::A:S::::::TS::::IDVE:K HVO_0881 ::V::TD:::::V:GA:Y:F:::L::SV:P:D:-::::F: Hbo0658 :SEN:VS:::::::::::::::::::A::A:ASE:R:::: NP0348A :QQ:::A::Q:::::::Y:F:::L:GR:VDAE:E:R::V: rrnAC0630 :::::TGK:::::QQ::::::::I:G:A:::IEGL:::R: Hmu1034 :S::::G::QT::QTA::::::::::A::::LDGL:::R: