|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 1698 | HQ3235A | hla0192 | NP0074A | rrnAC3073 | Hmu2757 | HVO_0327 | Hbo1153 |
1195 | HQ3235A | 1830 | 1048 | 1014 | 981 | 956 | 1036 | 1047 |
1222 | hla0192 | 1048 | 1798 | 973 | 1053 | 973 | 1021 | 1006 |
1291 | NP0074A | 1014 | 973 | 1806 | 1161 | 1189 | 1096 | 1084 |
1338 | rrnAC3073 | 981 | 1053 | 1161 | 1669 | 1262 | 1064 | 1084 |
1267 | Hmu2757 | 956 | 973 | 1189 | 1262 | 1656 | 1009 | 1077 |
1301 | HVO_0327 | 1036 | 1021 | 1096 | 1064 | 1009 | 1739 | 1166 |
1263 | Hbo1153 | 1047 | 1006 | 1084 | 1084 | 1077 | 1166 | 1678 |
256 symbols consensus ---------MSRSADTAT------DADAVDAALAAFRAGEPVLVHDFADREGETDLVYPA #oth 1111111111324413331222123433243123.132.2.111..12.....1.21... HQ3235A MDTNADINPSTANM::T:DRYI:ESSET:T::VT:::D:D:::::::T:::::::II::: hla0192 ::::::::::RAD:::DVDAVPGS:::S:NR::D:::::D::C::::::::::::II::: NP0074A :::::::::::::S::::::::::ADRG::::VS::A::Q::::::A::::::V:::::: rrnAC3073 :::::::::::::EE::V:::::::::S:AD:V:::AR:::::I::A::::::::::::: Hmu2757 :::::::::::::SEQ--::::::A:TGA:D:I:::GR:Q:I:I::A::::::V:::::: HVO_0327 ::::::::::::T:ESTG:::::::F:::SRV:D:::::::::::::D:::::::::::: Hbo1153 ::::::::::VQRT:---::::::--::LSS::S:LS::::I:::::D:::::::V:::: consensus GAVDPAAVARMRNDAGGLVCVALSDSVAEALELPFLQDVLDHPAAADHDLAYDERSSFSL #oth 1.153111.11.......1.1.1225.23322...233422..23211113..2.....1 HQ3235A R:I:AD:I::L:::::::I:T:V::T::TT::::::E:IIE::TT:::::G::S:::::: hla0192 ::::E::::H::::::::I:::VA::::D:FG::::A:A:::::VN:-:PE::D:::::: NP0074A :::A::D:::::::::::I::::::A:CT:W::::R:TLV::::G:S:E:D::::::::: rrnAC3073 :::S:D:::::::::::::::::::R:::::::::M:E::S::T:::::::::::::::: Hmu2757 :::T:D::::L:::::::::::::::::HSFD:::M:ES::::S::::E:G::::::::: HVO_0327 :::GS:D::::::::::::::::PND:S:S:G:::MD::::::::SS::::::S:::::F Hbo1153 :::E::D:::L:::::::::::::HE:S:E:G::::DG:I:::T::::E::::D:::::: consensus TVNHRDTFTGITDEDRALTITELAAAAEAAR----------AGE--YDADDFAAEFRAPG #oth 1....111.....3..13..51.242.333311111111113242212222.233..2.. HQ3235A P::::E:::::::D:::Q::HR:GTV::::D::::::::::::::::T:E:::::::T:: hla0192 P::::E:::::::::::R::V:::VS:A:VD:::::::::::DPAG::P::::::::::: NP0074A :::::::::::::S::::::A::G:::DDI:RARTVAGEDAT:AIAP::EA::ER::::: rrnAC3073 :::::::::::::D::S:::Q::::V:AD--::::::::::---::P:P:A:SDA::S:: Hmu2757 :::::::H::::::::S:::::::G::SE--::::::::::---::P:GTT::EQ::S:: HVO_0327 ::::::S::::::R:::M::SR::PV::::::::::::::::::::::::::GG:::::: Hbo1153 P::::::::::::::::::::::S::::RVP::::::::::D:D:::G:::::::::S:: consensus HVHLLRGAPDLLSDRQGHTELGLALAAAADQAPAVVVCEMLDDETGAALPPAAARAYAER #oth ..22..1.131.41.4.....1..2.2111522.1........11.4.13121.32..31 HQ3235A ::NI:::::K::T::R::::::::::D:::C::::::::::::A::N:TA:TD:QT:::K hla0192 :::V::::H:G:RG:T::::::::M:E:V:A:::A::::::::::::::T::D:E:::R: NP0074A ::::::::::::D::E::::::::::E::GV:::::::::::::::E::S:T::::::D: rrnAC3073 ::::::A:::G:A::E:::::A:::::::::PE:A::::::::::::::::::::::::: Hmu2757 ::T::::::G:::::L::::::::V::::::P::::::::::::::G::T:::::::::: HVO_0327 :::::::::N::::::::::::::::DE:GIS::::::::::::::::::KD:::D::D: Hbo1153 ::N::::::N:::::::::::::::::E::LPA:::::::::::S:T::S::::LD::N: consensus NGLVYVEGAALVERLG #oth 3222111.33223215 HQ3235A :DI:FID:::V:TE:: hla0192 RQIP:::::::::AFK NP0074A ::FP::::SDI:S::: rrnAC3073 E::::::::S:L::FD Hmu2757 E::A::::S::::::M HVO_0327 H:FAF:D:DG:IDE:V Hbo1153 HD::::::MDV::::A