|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2133 | Hmu2760 | hla0195 | Hbo0370 | VNG2120 | HVO_0331 | Hbo1148 | rrnAC2471 | HVO_1191 | hla2179 |
1502 | Hmu2760 | 2118 | 1215 | 1250 | 1318 | 1403 | 1329 | 1339 | 1256 | 1295 |
1466 | hla0195 | 1215 | 2209 | 1210 | 1292 | 1392 | 1353 | 1263 | 1204 | 1271 |
1496 | Hbo0370 | 1250 | 1210 | 2126 | 1349 | 1320 | 1306 | 1405 | 1350 | 1451 |
1591 | VNG2120 | 1318 | 1292 | 1349 | 2147 | 1444 | 1411 | 1434 | 1326 | 1423 |
1799 | HVO_0331 | 1403 | 1392 | 1320 | 1444 | 2135 | 1648 | 1501 | 1465 | 1502 |
1612 | Hbo1148 | 1329 | 1353 | 1306 | 1411 | 1648 | 2125 | 1422 | 1324 | 1340 |
1727 | rrnAC2471 | 1339 | 1263 | 1405 | 1434 | 1501 | 1422 | 2148 | 1464 | 1504 |
1612 | HVO_1191 | 1256 | 1204 | 1350 | 1326 | 1465 | 1324 | 1464 | 2134 | 1504 |
1713 | hla2179 | 1295 | 1271 | 1451 | 1423 | 1502 | 1340 | 1504 | 1504 | 2209 |
300 symbols consensus ----------MIPPIANRFVAGETAAGALDHARSLNDDGVAGILNLLGEHYDERAPADAD #oth 11111111111...2.21.....243212312265.32.142.1.1.....32152.321 Hmu2760 ::::::::::::::L:R:::::::T::::E:::QC:EE:IGV:::Q::::::R:E::KEA hla0195 MKSLPPRVER::::::R::::::S:PE:IE:::AR:E::::V::::::::::DP:D:R:: Hbo0370 ::::::::::::::V::N:::::DVE:V:S:VAET:ER:IS::V::::::::D:SD:A:: VNG2120 ::::::::::::::::::::::::P:E:IEY:AD:::R::TA:::::::::H::P:::E: HVO_0331 ::::::::::::::::S::::::S:::::::::RM::::::V:::::::::A::::::E: Hbo1148 ::::::::::::::::S:::::::S:A::::T:KV:K:::KV:::::::::H:::::::: rrnAC2471 :::::::::::::::::N:::::::P:::::VA:::::::K:::::::::::::Q:::E: HVO_1191 ::::::::::V::::::N:::::::D::VS:VE:::R::I:::::::::::TD:TA::P: hla2179 ::::::::::::::::SN::::::PEA::A:VE::::R:::::::::::::A::P::::: consensus AAAYVDLVEDIADSGLDACVSVKPSQIGLDVGDDVFRENLRRIVAAA--------DEHGV #oth 123.34.3442253221222.1.1..1.1.21243.431153113311111111123413 Hmu2760 ::T:ES:::E:DLA::R::L:I::::L::::SEQL:ES::DSV:TH:::::::::AARD: hla0195 TD::LA:LT:::::::::SI:::::::::::S:EC:EGHY:E:::R:::::::::H:LDA Hbo0370 TEV:LE:A:Q:DERD::C:L::::::::::I:E::::R::S:::EH:::::::::::::I VNG2120 ::::RR::A:VG::DV::::::::::::::::PE::A:::ET:A:::::::::::AD:D: HVO_0331 ::::::::::::ST:I::::::::::::::A::H::E::Y:::AE::::::::::::::: Hbo1148 ::::LE:I::VG::E:::::::::::::I::::E:::::YL::AEKG::::::::A::D: rrnAC2471 :DQ::E:IQE:DK::::CA:::::::::::::::::V:::E:::::G:::::::::D::: HVO_1191 :D::::::RRLGATD::G::::::::::::IS:RA:::::D:::D:::::::::::AE:: hla2179 :D:::::::S:::R:I:::::::S::::::I:::::Q:::A:::D::NAPAATGP:GT:T consensus FVWVDMEDHETTDVTLDAFERLARETDGGVGVCVQANLKRTRDDLERLADVPGKVRLVKG #oth .2.2....22...1.112213424335131.2.2.1..1..42..2..121...1..... Hmu2760 :::I:::::::::A::::::::::Q::::::L::::::R::P::::::::L:::I::::: hla0195 :::C::::AD:::A::::::SI:E:YPWS::Q:I:S::::::E::D::S:::::I::::: Hbo0370 :::::::::D:::A::::::EN:::Y-:D::::::::::::AE::R::::L::::::::: VNG2120 :A:::::::::::A:M:T::S:::THA:NM:L:::::::::EQ::D:::::::::::::: HVO_0331 :L:C::::::::::::::::E::::F:::M:L:::::::::P::::::::::::I::::: Hbo1148 :::C::::AD:::::::V::EA:::Y:::::Q:::::::::G::::::::::::I::::: rrnAC2471 ::::::::YT::::::::Y:::VT:HE::::::T:::::::PE::::::PL::::::::: HVO_1191 ::::::::::::::::N:VDD:GHR:G:N::::::::::::::::::::E:::::::::: hla2179 :::I:::::::::::::::::H:I::::N:::::::::::::E:::::::L::::::::: consensus AYDEPAAIAYKDKSRVNEAYRDCLEFMFEEFDGGIAVGSHDPAMISYAADLHAEYGTDYE #oth ..21143112231351113.225.331.23232211.....13..43.63134111211. Hmu2760 :::P:PS::LQ::AEI:Q::::Q:RYL::H:Q:EV:::::::E::DL::S::D::::P:: hla0195 :::::E:::H:EQ:::D::::ED:R:L::RR:R:::::::::::::L:DR:AR:H:A::: Hbo0370 :::::KE:::R::AT:D:K::EY:T:::::::D::::::::V:::NH:::CYR::::PF: VNG2120 :::::DDV::Q::PD::::::TH:::::R:::D:V::::::::::::::E::E::::::: HVO_0331 :::::::V:H:Q::A:::::KEL:AYL:R:Y:::::::::::E::A::H::G:::DR::: Hbo1148 ::::DPE:S::Q::K:::K:EEY:::L:::YV:RV:::::::K:::A:EE:AN::DR::: rrnAC2471 ::S::EEVS::K:E:::::::::::L:::::E:::G:::::::::D::K:::D::::::: HVO_1191 ::N:::S::::E::K:D:V:::L::Q::T:::::::::::::H::AH:RR::EQ:::P:: hla2179 ::::::::S::K:A::D:S:::::AY:::T::D:V::::::::::E::SE::::H::P:: consensus VQMLMGVREDAQRDLAAD---GVEVWQYAPYGDKWFSYFYRRVRERKENALFALRAVLGR #oth ......1.124.32.23411135222..2...41.21..1..22..12.12..1..1313 Hmu2760 ::::::::D::::S::T::::-C:::::::::GE:LA::::::A::::::::::::I:S- hla0195 :::::::::::::::::Q:::::D:A::::::T::L::::::::::RQ:LG::V:::::: Hbo0370 :::::::::NL:DE:V-::::SMP:Y::V:::P::::::T:::::::::::::::::F:- VNG2120 ::::::I:::::TE:::T:::::PTY::V:::G:::::::::AM:::::LV::::::::: HVO_0331 :::::::::::::::::::::::::::::::::::V:::::::::::::::::::::V:V Hbo1148 ::::::::D:T::E:S:E::::T:::::::::::::::::::A:::::::::::::IV:I rrnAC2471 ::::::::D:E::::::E::::IPM:::I::::::::::::::::::::::::V::::S- HVO_1191 ::::::::::G:::::DA::::I:T:::V::::::::::::::::::S:::::::::A:I hla2179 :::::::::A::F:::::PDVDA::Y::I:::S:::::::::I::::S::::::::IV::