|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 4662 | VNG0409 | rrnAC0178 | Hmu0721 | hla2715 | HVO_0829 | Hbo0706 |
3075 | VNG0409 | 4672 | 2677 | 2699 | 2668 | 2610 | 2764 |
3629 | rrnAC0178 | 2677 | 4467 | 3368 | 3161 | 3116 | 3220 |
3668 | Hmu0721 | 2699 | 3368 | 4663 | 3167 | 3166 | 3236 |
3765 | hla2715 | 2668 | 3161 | 3167 | 4883 | 3322 | 3384 |
3849 | HVO_0829 | 2610 | 3116 | 3166 | 3322 | 4734 | 3845 |
4006 | Hbo0706 | 2764 | 3220 | 3236 | 3384 | 3845 | 4700 |
644 symbols consensus M-TYDIERYLNIRSAGGASLGPDG-RLSFLMNTTGTAQVWSLDEPGAWPEQRTFYDERVS #oth 144212111122131323332231131213121..13.1.3123.31..2.2..2112.2 VNG0409 -MA:::::::D::G::DPTY::T::E:A:TLG::::::::A:GA:::::T:L::H::::Q rrnAC0178 -:----------------------:-----:::::V::L:::P::HG::::L::::DT:: Hmu0721 -:V::L:::::V:::T::T::::::Q:A:R::A:::F:L:NV::::G::Q:::::EDS:: hla2715 :HQ::::::::V:N:::TD:::N:::::::L:::::G::::::::LG::::H::FE:S:: HVO_0829 :R:::::::::::::Y:::FSA::E::::::D:::VP:::TV:S:::::::::::E:::T Hbo0706 :T:H:::::::::::Y:::F::::E::::::D:::VP:::T::G:A:::::::::::::T consensus FASFSPERPELVFGMDEGGNERAQLFRLDADSGEITNLTDMPDAKHRWGGWSHDGDRFAF #oth 1113..113.121.1.2..1.13..312332314144..34.1...1....131.1.1.1 VNG0409 W:::::T:E::AY:::T::D:FT::H:VSG:GS:DVQ::AF:::::D::::::::::I:Y rrnAC0178 :VD:::::Q::::::::::::::::Y:::::-:H:HE::G::::::::::::P::E:::: Hmu0721 :::Y:::::::I::K::::D::M::::::::-:T::S:::S::::::::::::::E:::: hla2715 :VDS::::A:A::::::::::::::YL:NYE:::::D:::R:E::::::::DSE:::::: HVO_0829 :::W:::::::A::::N:::::::::::EP:T:V:E:::EH::::::::::::::E:::: Hbo0706 :::W:::N::::::::::::::Q::L:Y:PI::G:S:::E::::::::::::N::::::: consensus ASNRRDEAVFDIYVQGRDATGDDAELVHEGDGW--LSVGGWSPDDDRLLVSEAHSNFDQD #oth 11....311..1...2..33133122.31..111121.2.1..1132.2.4111.11.1. VNG0409 TA::::ASR::V::::::EA:AN:DC:RV::TFDLP::V::::S::::::VDT::::::: rrnAC0178 :::::::::::::::D:::::::::::W:::::::F::::F:::GE:::::::::S:::: Hmu0721 :::::::S::::::::::D--:E:T:::::::::::T::::::::TK:::G:::::V::: hla2715 ::::::TS:::::::D:::I:G:::::Y::::::::::A::::S::::I:H::::S::H: HVO_0829 T:::::H::::V:::A::G::T:T::::::::::::T:::F::::SK:I:Q::Y:::::: Hbo0706 T::::::::::V::::::E:::A::M::::::::::T::::::::SM:V::::Y:::::: consensus VSVLDLATGELTHLTPH-QGDVRFQSAEWGPDGEGVYLVTDRDSDTLELARLDLESGEFS #oth 231..221.23212.1113222.13123.1.1.221.211.421.114.41232221323 VNG0409 :A:::VD:::I:RA:AGLDA:T::SWVA:A:::G:::VT::H:A::RY:GL::P:T:AI: rrnAC0178 IY:::IDS:NRS::::::E:K::YT::S:::E::A::::::AE:::::::::S::-:DLD Hmu0721 LF::::ES:DFE::::::H::::YG::Q:A:::D:::::::S:A:LRW::::::D-ETLR hla2715 :YT::::::D:::H:::::R:A:YG:P::::E:::L:::::::::::R:E::::AT:::: HVO_0829 ::::::::::::::::::::T:::::P:::::::N::M:::CG::::::V:YE:A::::T Hbo0706 :::::VE:::::::::::E:T:::::::::::::N::::S:::::::D:W:VNV:::::: consensus RVASDDD---------------------------WNIDGVAVDHDSRRLVYSRNVDGYTE #oth 5.331221111111111111111111111111111221112323121.21.11.21..21 VNG0409 :::DGG:::::::::::::::::::::::::::::P:EA:VTA::AG::A:V::R:::S: rrnAC0178 I:R:::Q::::::::::::::::::::::::::::::::::L:K::G:::::::I:::N: Hmu0721 E:V:::::::::::::::::::::::::::::::::V:::S::V:TG::A:::::::::D hla2715 V:::GA:LEGESGAGDEEDDEEGGSPVKPGGDDG::V:::::HEE:::V::::::::::: HVO_0829 T:ETGG::::::::::::::::::::::::::::HEL::LSI:::::::::::::E:::: Hbo0706 L::E::E::::::::::::::::::::::::::::E::::::::::::I:::T::::::: consensus LTVGELTAPDRIDEFPTPDLPGGVAGGVSFGPDGDRFAVTVTGSTDNANVFVVDAATGEA #oth 1.212123211123312.1..4.211.1.11..1112.1212222312..1..133..23 VNG0409 ::IADAAG-TTLT:Q:::E::D::IR:L:W:::::TL::V:SAA:E:P::::::V:::A: rrnAC0178 :::::::G:TT:ET:::::::::L:::::W:::AE::::S:::R:V:T:::::ETE:::S Hmu0721 ::::R::DETT:ET::::E::::I:::::W:::AE::::::::R:V:T:::::ETE:::: hla2715 I:::::VE:::::P:::::::E::::::::::::::::L:AA::AH::::Y::::T:::T HVO_0829 ::F::::::::::AL:Q::::N::::::::S:::E:A:::::A:A:T:::Y::EL:::D: Hbo0706 ::::::::::::::YAV::::R::::::::S::::::::::SR:S:T:::Y::::K:::V consensus ERWTAAATAGIPRDTFVEPELVRYPTFDGREIPAFFSLPDAEA----ADGDTPVIVDIHG #oth 11..3.1.....42.122..1.1121...11...1.13.3543211131233.....1.. VNG0409 TQ::N:::::::KS::R:::::::E:::::::::L:TR::---::::G::PH:::::F:: rrnAC0178 :Q::::S:::::QE:LI:::V::FDS::::::::L::P::GA:DGAG::::::::::::: Hmu0721 T:::H:S:::::DS:::P::::HFES:::::::::::::P::VR:::::DGV:::::::: hla2715 ::::::S:::::P::::D::::H::::::K:::::::V:AT:P::::PENGY:::::::: HVO_0829 ::::L::::::::::::P::::::::::::D:::::T::EES-::::SE:E::::::::: Hbo0706 TQ::H:::::::::::::::::H:::::::::::::::::DD:::::GE::::::::::: consensus GPESQRRPSFSALKQYFLSRGYAVFEPNVRGSSGYGKAYGHLDDVENRMDSVADIRAGVE #oth ...1......3213..1131...2........2...22.33..1.11.1.1.2.22.1.1 VNG0409 :::G::::::LS:R:::VDN::::::::::::::::AT:MN::N:R::::A:::GK:::: rrnAC0178 :::::::::::G:T::::::::::::::::::T::::::T::::::K:::::K:L::::D Hmu0721 :::::::::::G:Q:::::::::L::::::::::::TD:MQ:::::::L:::R::::::D hla2715 ::::::::::ASV:::L:NN:::::::::::::::::::AA:::::K::::::::K:::: HVO_0829 ::::::::::::V::::::::::Y::::::::A:::::::::::::K::::::::E:A:: Hbo0706 ::::::::::N:V:::::AN::::::::::::A::::::::::::::::::::::E:A:: consensus WLHDHPAVDPDRIVAMGGSYGGFMVLAALTEYPDLWAAGVDIVGIANFVTFLENTGDWRR #oth ..131121.2.12..2...........11....1.....1.2.................. VNG0409 ::TARTDI:A::V::Y:::::::::::S:::::E:::::::::::::::::::::::::: rrnAC0178 :::N:::::::::::::::::::::::::::::::::::::V:::::::::::::::::: Hmu0721 :::E::::::::L::K::::::::::::M::::::::::::V:::::::::::::::::: hla2715 ::::::E::S::V::::::::::::::::::::E:::::::::::::::::::::::::: HVO_0829 :::::::::::K::::::::::::::::M::::::::::::::::::::::::::::::: Hbo0706 :::::::::::::::::::::::::::SM::::::::::I:T:::::::::::::::::: consensus ELREAEYGSLEDDREFLESISPINNADRIRAPLFVLHGENDPRVPVGEAEQIVEQAREQ- #oth 21..1.....23..1....1..111224.31..1.1..1.......1..11111423112 VNG0409 :H::S:::::DA::::::::::T::::::::::L::::A:::::::::::R:::::SAH: rrnAC0178 ::::::::::DT:::::::::::::V:::N::::::::A:::::::::::::A:::A::G Hmu0721 S:::::::::::::G::::V:::HS::Q:A:::::I::::::::::::::::ADAV:::D hla2715 K:::::::::AE:::::::::::::IAA:ES:::::::::::::::::::::::RT:::G HVO_0829 :::::::::::::::::::::::::VET::::::::::::::::::S::H:L::E:::H: Hbo0706 :::::::::::::::::::::::::IEK::::::::::::::::::S::H::::K:G:H: consensus VPVRKLIFDDEGHGFAKRENRIEAYRAVVEFLDEHV-------- #oth 11.1211.1.....12.11.111..32111..111111111111 VNG0409 :::E:HV::::::::S::A:KQA::::::D:::D:A:::::::: rrnAC0178 :::E::V:::::::IS:::::::::T:::::::D:::::::::: Hmu0721 :::EL:V:::::::I::::::::::TR::::::::::::::::: hla2715 :::::::::::::::::L::::::::::::::A:Y::::::::: HVO_0829 AH::E::::::::::T:L:::::::SQIAD::::Y:RSAPAADD Hbo0706 ::::E:::E::::::T:L:::::::E:I::::::::::::::::