|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 3156 | Hmu1911 | Hut1701 | Hmu1659 | VNG0468 | HVO_1799 | hla2402 | rrnAC0726 | Hmu0771 |
1187 | Hmu1911 | 3078 | 1086 | 1143 | 976 | 1077 | 1058 | 995 | 1008 |
2335 | Hut1701 | 1086 | 3123 | 2019 | 2011 | 1962 | 2041 | 1951 | 1965 |
2362 | Hmu1659 | 1143 | 2019 | 3178 | 2060 | 1993 | 2071 | 2097 | 2078 |
2402 | VNG0468 | 976 | 2011 | 2060 | 3163 | 2084 | 2087 | 2157 | 2170 |
2418 | HVO_1799 | 1077 | 1962 | 1993 | 2084 | 3186 | 2050 | 2118 | 2031 |
2468 | hla2402 | 1058 | 2041 | 2071 | 2087 | 2050 | 3155 | 2168 | 2235 |
2533 | rrnAC0726 | 995 | 1951 | 2097 | 2157 | 2118 | 2168 | 3188 | 2500 |
2505 | Hmu0771 | 1008 | 1965 | 2078 | 2170 | 2031 | 2235 | 2500 | 3144 |
427 symbols consensus MRDRYDVVIAGAGPAGAQCARDLAAR-GYDVVVLETEPEDEFPRQSNKSTAGTFPSMMAS #oth 14142.111..1....3.2..1115.12.2.3...213132112311...1...323242 Hmu1911 -MES::I:V::G::::L:F::SVVG:SD:S:A:::AND:---LADND:::G:::HQVVEG Hut1701 :VEG::::::::::::C:::::V:R::::::::::A:SAA::::G:::::G::::P:L:: Hmu1659 :::N::::V:::::::::::::::D::::::::::::TAE:::AR:D:::G:::A:::TA VNG0468 :S:KH::IV:::::::::::::::E::::::::::A::::::::::::::::::A:::GA HVO_1799 :T:N:::I::::::::G:A::::::::::::C:::::S:::::SR:::::::::::T::: hla2402 :V::::::::::::::::::::::T::D:::::::::S::::::::::::::::::::S: rrnAC0726 ::E:F:::::::::::::::::::E::N:E:L:::S::::G:::::::::::::M:A:TG Hmu0771 :SE:F:::V::::::::::::::::::N:::L::::::::G::::::::::::::::::: consensus FGIPDDVVMQYTDDVVLESPNDHYVRDQPGAVLEFAAFKQFLVADGRAKGAEYRFDARVS #oth .31..1...33114.12.1.33224431312..1.221131.1222234..211122..3 Hmu1911 ::V::E:::SESAT:QF:G:SARVTL:I:NY::D:P:LLE::G::AA:D::DIHTGV::R Hut1701 ::::::::::F::S::I:::TEYFRA::V::::::G:::E:::::::EA::::::::::: Hmu1659 :::::::::HA::A:::::::::F::::::F::D:P:::::::D:::::::::::::::R VNG0468 ::V:::::::::::::::::HEYF:Q::::::::::E:::W:::A:EQQ::::::E:::N HVO_1799 :N:::E:::NF:::::::::::::H:H:::::::::D::NW::DEAE:D::::::::::: hla2402 :::::::::S:::::::::::N::KSY:::::::::D::R:::::::ES:::::::S::: rrnAC0726 :A:::::::N:::N::::::::::::N:T:::::::E:::W::SE::D:::T::::S::: Hmu0771 :S:::::::::::S::::::::Y::Q::A:::::::E::::::::S:E::::::::S::T consensus APIL-EGGEIVGVR--YNGDEEVY-ADIVIDATGPAAPLAKALDVCDLERENQAIGIEYE #oth 5.131121412..21111.32211111211.....1111123.22411316421..2.21 Hmu1911 E::V::::TV::::GTRD:ESVT:R::L:V::::::GT:TTR:HMW:R:AAQRG::K::: Hut1701 E:L::D:DDVI::::::::S:::H:::V::::::::::::T::G:S::::TR:::::::: Hmu1659 D::V::D:SV:::::::::A:T:::G:::V::::::::::TE:G:V::::R:H:::::HQ VNG0468 N::T:::::::::K:::D:::::::G::I::::::::::::K:G:T::R:S:::::::W: HVO_1799 K::M:::::::::::::::::::::::::::::::S::::::::L:::R::K:::::::: hla2402 R:::DDD:V:E:::::::::::::::EV:V::::::::I:S::::V::::K::::::::: rrnAC0726 :::M::N::::::::::D:::::::::::::::::::::::E::::N:Q:NH::::V::: Hmu0771 :::T::D::::::S::::::R:::::E::V:::::::::::K::::::K::H:::::::: consensus FEGVELDHDGYADLRDAMMLRLDHDLAPGGYSWIFHTGGDTAKVGVCYIQNESHRRHAKD #oth 311243333322..221.11.1..14.....1.1.21.3121...2.1.21342255253 Hmu1911 VT:-------RY::S-S:LF:F::EY:::::A:V:PG:D:VF:::::W:DDFYA:HSPP: Hut1701 L:::T::A::M:::T:::::::::EV:::::A:V::::D::::::::::N::GYQ:::T: Hmu1659 ::::::::PD::::S::::::::::F::::::::::::::::::::::::::QY:A::S: VNG0468 M:N:AV::E:::::S:::::::::::::::::::::::A::::::I:::::::YQ:FGDA HVO_1799 :::MD:AP:::G::T::::::::::I::::::::::::::::::::::::::G::HN::S hla2402 M::::MN:PE:::::RS::::::::I:::::::::A::E::::::I:::::DR::EF:QE rrnAC0726 :::::V:::D::::::::::::::::::::::::::::E::::::L:::::G::QKY::: Hmu0771 ::N:DVN:PE:::::::::::::::::::::::::::::RS::::L:::::D::SQR::: consensus DRTIDDYLDYWLDSDPRFA-DAERIEGKQ-HRGSAHIQLP-DRMSTDNFMAIGDTVPSVD #oth 2531.11123.433.1.221113133232111.1.1215115323.1313.1..1.1121 Hmu1911 :GA::::VER:AR::::WEV:DV:AV---::A:Q:ISDNSIN:RA::GLV:V::S:S:IN Hut1701 :::::G:::H::TI:D::::N:T::::R::::::::::S::G::T:AG:I::::::::L: Hmu1659 :::V:G:::H::::::::::::S:V:ST::V:::::V:P::ES::::S:V:::::::::: VNG0468 SKS:::H::::MET:::L::::TKLA:::::::::::::::ANF:::::::::::::T:: HVO_1799 GY::::::Q::TE::::::::::::A:::::::::::::::G:::::::::::::::T:: hla2402 SQ:V:G:::A:I:R::::::::TK:N::V:::::::::M:::Q:H::R:L::::::::I: rrnAC0726 GMG:::::E:::::::::D::::::::T:A::::::::P:::S::::::::::::::T:: Hmu0771 GMG::::::::::R::::D::::KL:S:::::::::::R::SS::::S:::::::::TI: consensus PLWGEGIHKGMKSARAAAATADRALTPSERDTSAEALAVYDRLWHRRVAPRAKRRLMMTE #oth .11....222.3.112..411131124362221125114.142.1432112545115212 Hmu1911 ::F::::RS::E::EM::EV:T::::AG--:V:RSF:SA:E:R:N:EKGSNW::QRIAG: Hut1701 ::::::::NS:Q:G::::V:V:Q:::::QP::::::M:Y:ESI:::KI:::MDS::R::: Hmu1659 :V:::::D:::R::::::M::::C::GGV-:::R::M::::D:::E:::::QE:::F::R VNG0468 :::::::::C:E::::::I::::CFMGDD:::::D::SI::D:::K::::N:RM::T::Q HVO_1799 :::::::D:C:R:G:V::::::::::N:::::::SE::I::Q:::D::::KV:N::F::: hla2402 ::::::::::::::::::::V::C::D:K:RLD::S::::E:::::D::::M:S:::L:R rrnAC0726 ::::::::::::::::::::::S::K:D:P:::::N:S:::Q:::SE:::KHNA:::::: Hmu0771 :::::::::::::::M::I:::AC:::ETPN:D::TM:T::K:::SE:::::RE::L::: consensus LLYLAPNERYDRLMADLRRLDDETLSAANQGERRAIAKLL-----HLEDL---PLLARFA #oth 1..222131112124215534541.44314134333432211111342.311113.3332 Hmu1911 :::DFDAAQQN:FV:NSG::S:AQ:DRLQRY:L-TLPD::SLYPFR:D:VRKA:T:L:HL Hut1701 :::::S:D:::::L:E:Q:::::::::V:::SW::V::::::::::I::V:::::::K:V Hmu1659 ::::V:::::::::R::NA::R::::KI:E:S::Q:LR:::::::SPS:::::SY:W:YV VNG0468 :::::S::::::::S::QTA:VG:::G::E:GL:SLLEFV::::::T::V:::::::::: HVO_1799 M::R:S:::::K:LE::H::P::Q:D:::G:SPL:MFRM::::::KF::::::SI::ST: hla2402 ::::::::::::F:R:::KTEEN::EK:::::KASM:::::::::::D:I:::::::K:: rrnAC0726 :::::::::::Q::D:::STGQD::RQI:G:D:::::::T:::::::S:M::::I:VEY: Hmu0771 ::::V::S:::Q:::::KEVGAG::ARV:A::K:::S::::::::::S::::::T:VKY: consensus RRR-LSA #oth 2441365 Hmu1911 --W:--- Hut1701 KKH:VT- Hmu1659 :EFA:PV VNG0468 :D:::R: HVO_1799 KDW:F:N hla2402 :EQ::GS rrnAC0726 :::::DI Hmu0771 :::::::