|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 3251 | Hmu3101 | hla1360 | rrnAC1898 | Hut1616 | HVO_A0049 | VNG6302 |
2468 | Hmu3101 | 3211 | 2126 | 2109 | 2095 | 1845 | 1833 |
2555 | hla1360 | 2126 | 3392 | 2285 | 2116 | 1688 | 1705 |
2645 | rrnAC1898 | 2109 | 2285 | 3365 | 2380 | 1769 | 1681 |
2504 | Hut1616 | 2095 | 2116 | 2380 | 3224 | 1773 | 1690 |
2109 | HVO_A0049 | 1845 | 1688 | 1769 | 1773 | 3308 | 1809 |
2072 | VNG6302 | 1833 | 1705 | 1681 | 1690 | 1809 | 3387 |
490 symbols consensus ----------------------MVDIALSAGRLVLALFLVVLNGFFVAAEFAFVRVRGTS #oth 11111112222122221122221323211222221.13..21..1...1.....12.311 Hmu3101 :::::::::::::::::::::::T:::::L:GIA::::::L:::::::S::::::I:A:: hla1360 :::::::::::::::::::::::I:::I::T:V:A::V::::::::::S::::::::S:: rrnAC1898 :::::::MGVYAHIDARRLGAA::NL::::AQ:::::V::G::::::::::::::::::: Hut1616 ::::::::::::::::::::::::NV::::AQ:::::I:::::::::::::::::::::: HVO_A0049 :::::::::::::::::::::::::L-I:V:G:L::F::::M::V:::::::::KL:P:R VNG6302 MRWRHPSALRKADERGRRTPCVVSATS:AV::IA:::L:::::::::::::::::L:SA: consensus VEQLVEEGRPGAGALQDVMDNLDDYLAVTQLGITLASLGLGWVGEPAVAALIEPILAPVL #oth .31.122.22.1241221242..2...21.....21......1....112.21.3.222. Hmu3101 :Q::::::AA:::V:D:::::::::::T::::::V::::::::::::I:D:L::V:::I: hla1360 :::::::::::S:::::::GS::::::A:::::::::::::::::::IV:::::A:G:L: rrnAC1898 ::::AD:::A:::S::A::AD::N:::::::::::::::::::::::::::L::V::::: Hut1616 :D::A::::::SAT::E::T:::N:::T::::::I:::::::::::::::::::::ES:: HVO_A0049 :NT::DR:K::::LV::AIE:::G::::S::::::S::::::I:::::::::::::GEL: VNG6302 ::T::QD::R::T:VKEAT:::::::::S:::::I::::::::::::::V:VD:L:E::: consensus PASLIHLVAFAIGFGIITFLHVVFGELAPKTIAIARAERVALLLAPPMKLFYYLFYPGIV #oth .2423.4.11.2..221.1....1.......2..131.121231.12..1111213..11 Hmu3101 :P::L:A::::V::TV:::::::::::::::L:::D::KIS::V:A:::F:F::L::::: hla1360 :PN:V:I:::::::S::::::::::::::::::::Q:::::MM:::::::S::::S:::: rrnAC1898 :ET:L:V::::V::T::::::::::::::::F::::T::LS::::::::::::::::::: Hut1616 ::::::::::::::S::::::::::::::::::::QT::LS:F::::::F::FIL::::: HVO_A0049 ::GA:::::::L:::F:::::::::::::::F::QE:::::F:V::L::F:::V:I:::I VNG6302 ::PVR:T:TV:L::::V:L::::Y::::::::::Q:::::::VV::V::::::V:L::TI consensus VFNGAANAFTQLLGVPPASETDETLGEREILRVLARSGEAGHIDAAEVEMIERVFELDDT #oth 1...3.1311222..2.12.221.24.2.1121.321223.41234..3..23..211.2 Hmu3101 ::::S::F::::I::E::::SE:::E:E::::::NQ::Q:::V::G:::::Q::::F::R hla1360 ::::::::::RM::::::::::::MK::::R:::::::::::VADV:::::DA::::::: rrnAC1898 ::::S:::::::::::::::::::::::::R::::::::E:N:::S::D::::::D:::: Hut1616 ::::::::::RS:::::::::::::::::L::::T::::V:D::L:::T::::::D:::I HVO_A0049 ::::T::Y::S:F::S::A:GE::HS:E:::MI:T::E:T:E::LD::::::S::::G:: VNG6302 L:::I:TRSV::I::S:ET:GHD:HT:P:::S::SEASA::R:SP:::S:::H::S:::: consensus VVREVMVPRPDVTSVPADAPLPELRSIVLDAGHTRYPVVAADDGDQVIGFVDAKDVLRAG #oth 31..2.1.....3113.2232321123112221...1.2222.31221..111..1.113 Hmu3101 S:::::::::::I::T:ST:VT:::::::::::::::::EG::::::V::::::::::VL hla1360 ::::A:::::::::I::G:D:AAI:TT::::::::::::::::A:R:V:::::::::::: rrnAC1898 ::::::::::::V::::::TMSDI:AV:::E::::::::D:::S::IV::I:V::::::: Hut1616 ::::::::::::V::R:::A:SD:Q::::E::::::::L::E::::::::::V::::::E HVO_A0049 IA::I:::::::ET:S:SMT::::::VAASGTY:::I:LD-E::E:P::::H:::I:K:S VNG6302 T:::I:R::::::::S::T::::::TMAASGEY:::::TEGP:-:D::::::V::I:::S consensus EAGDES---VTAGDIARDIPVVPETTRIDDLLAQFRDER-RQMAAVIDEWGAFEGIATIE #oth 2223131114113111122321..1322221.31.142312.112.1....21..11.1. Hmu3101 D:::::::PA::::::::L:M:::S:::::::RE:Q::Q:::::I:::::::::::::V: hla1360 ::::::::::::A:L:::LVI:::::SLS:::V:::::::::::::V:::::::::V:V: rrnAC1898 :E:N:N:::T::::::HE::::::::A:N:::L:::QD:::::::::::::SL::::::: Hut1616 VE:GDA:::ESV:::::E:AIA:::MALS:::R:::EDQ:Q::V::::::::::::::V: HVO_A0049 :TETDHGDPI::H:::::VL:::::R:::AI::E:QTHGGG:I:V::::::V::::V::: VNG6302 D:I:::GD::::RELS:PVV:::::L:V:E:::E:QA:H:::::V::::::::::L:::: consensus DVLEALVGDLRDEFDAAGREPSIRKRDDGGYDVDGGVPLSEVNDALGTDFESDAVETIGG #oth .31.32...1112..4133322123221.3.321.2.122331141232124221..21. Hmu3101 ::::T:::::Q:G::::TG::::DA::::S:R:::A::::T:::E:DAT:::P:F::::: hla1360 :TV:T:::::::G:::::GDHAV::TGA:A:EA::S:S::V:::::::::DG:GF::L:: rrnAC1898 ::V::V:::::::::VD:::HA:::QS::S::A:::::::TAGE:::V:LDR:::::::: Hut1616 ::V::::::::::::MDE::::::P:::::::I:::::::KI::MIEGE:T::E:::::: HVO_A0049 :I::EI:::I:G:::T:PQG:T:EE::::T:V::::::VR:::ER::VE::A:E:::::: VNG6302 :A::VI:::I::Q::L:THAQ::EP::::::E:P:A:SIT:L::H::::::NE::::VA: consensus LVLSRLGRAPEVGDTAEAAGYVFRVTSVDGARISTVRIQPADEGDS--TE---------- #oth 1.221.2121241.2224321232.221112.1232313254332344312211111111 Hmu3101 :::D::::::KA:::V:TD::LIT:V::::::V:V:DVE::T----::--:::::::::: hla1360 :::D::::TS:T:::IA:GD:L:E::A:::::::::::EEV::::EVDG:DEVDGAGDGA rrnAC1898 ::::Q:D::::::::::::::::E::::E:T:::::::RAN:GD::PS:::::::::::: Hut1616 :::EQ:N::::R::RVAV::::VT::::E:S::::I:V:ERQ::::AVD-:::::::::: HVO_A0049 F:F:::::E::IA:EI:QN:::L::D:I:N:::ERLV:::PERSQKQT::ED:::::::: VNG6302 ::V::::H::T:::R:VIDTHT::::G::::::TSLTVT:DS----::--:::::::::: consensus ---------- #oth 1111111111 Hmu3101 :::::::::: hla1360 DDESGGADGA rrnAC1898 :::::::::: Hut1616 :::::::::: HVO_A0049 :::::::::: VNG6302 ::::::::::