|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 2584 | VNG2397 | Hbo0128 | HVO_0020 | hla0596 | Hut1083 | Hmu1932 |
1777 | VNG2397 | 2549 | 1395 | 1416 | 1479 | 1463 | 1511 |
1845 | Hbo0128 | 1395 | 2688 | 1561 | 1538 | 1466 | 1489 |
1913 | HVO_0020 | 1416 | 1561 | 2696 | 1651 | 1404 | 1423 |
1976 | hla0596 | 1479 | 1538 | 1651 | 2817 | 1477 | 1556 |
1797 | Hut1083 | 1463 | 1466 | 1404 | 1477 | 2662 | 1623 |
1851 | Hmu1932 | 1511 | 1489 | 1423 | 1556 | 1623 | 2612 |
408 symbols consensus ----------------EPAVELDGVTKRYGD-TTALDDVSLSVADGEFFTLVGPSGCGKT #oth 11111111121222335231.1211423112121.122.11.131............... VNG2397 ::::::::::::::::MTS:::Q:LVRAF:ST:::V::::V:I::::::::::::::::: Hbo0128 ::::::::::::::::VV:L:::::R:E::A:::::HE:::::DE::::::::::::::: HVO_0020 ::::::::::::::::-VRL:::A:S::::S:A::::S:::::D:::::::::::::::: hla0596 VGSDPALQAAADSPNGP::::::::::::::::A:V:::::::RE::::::::::::::: Hut1083 :::::::::MAEEGAA::G::::::AV:F:::V:::S::D::I::::::::::::::::: Hmu1932 ::::::::::::::MTT:G::IE:L:VG:D::V::::::::::T:::::::::::::::: consensus TTLRLIAGFESPTRGTVRFDGEDVSGVPPEDRDVGIVFQNYALFPHMTVRENVAYGLRFR #oth ....32..1.3.24.31212121132321.1.32.1...1......11.1...1...313 VNG2397 ::::::::::T:D::EIV:GDRS::::::::::::::::S:::::::::::::::::::: Hbo0128 :::::V::L:T::D:V:::::::::ST:T:::N::V:::::::::::::::::::::K:D HVO_0020 ::::C::::::::E::::::::SMV::A::S:G::V::::::::::LS:G:::::::::T hla0596 ::::::::::E::A::I::S::S:A::::::::::V:::::::::::::G:::G:::N:A Hut1083 ::::TL::::M:ST::::I::A::TDQS:::::C::::::::::::::::::::::::Y: Hmu1932 ::::S:::L:::D::I:SIG:R::T:ES::::ET:::::::::::::S:::::::::Q:: consensus DPPGGASRDERVAELLELVDLAGMGDRDPDSLSGGQQQRVALARALAPGPDVLLLDEPMS #oth 21.3132421..211.311222242..2.23.....1..1.1......1.21......1. VNG2397 E::::::TE:::S:::S::::::T:::E:AA:::::::::::::::::::S::::::::: Hbo0128 :::T:MTV::::S:::AMMN:GE:::::::N:::::::::::::::::E::::::::::: HVO_0020 :::::G:::D::::::D::::::FE::::::::::::::::::::::::::L:::::::: hla0596 :::E:M::S::::::::::::PDAA::::E:::::::::::M:::::::::L:::::::: Hut1083 S:::::DP::::TAM:::::MG:::::T:E::::::K::I::::::::::::::::::L: Hmu1932 :S:-ARDD::::T::::::EV:DLA:::::Q:::::::::::::::::E:A:::::::L: consensus ALDARLRERLRVQIKRIQSELGITTVYVTHDQEEALAISDRVAVMRDGRVEQVGTPRAVY #oth ....1..21..221111.21.21..1......2...11...1..213.311.112.222. VNG2397 :::::::D:::GT::E::R::D::::::::::A:::S:::::::::::A:V:::::E::: Hbo0128 ::::::::Q::RSV::V:K::NV::L:::::::::::V:::::::NG:::::::::QDI: HVO_0020 :::::::D:::R:V:::::D::V:::::::::S::::V::::::LNG:::::::D::DL: hla0596 ::::Q::::::::VR:::::::::::::::::::::::::::::::::TP::IAP::T:: Hut1083 ::::::::::::S:RE::R::D:::::::::::::::::::I::VNH:H:::::::Q::: Hmu1932 ::::Q::Q::::::::::::::::::::::::A:::::::::::::E::::::A::ET:: consensus REPATRFVAEFVGDNNVFDGTVED--ETGG---------TRVTVGDATFELEEG------ #oth 12.311...1.2.1...22132331334221111111114314.3134241343221111 VNG2397 :::SS::::::::E:::VS::AVP:L:::::::::::::SS:S:NGV:::V---:::::: Hbo0128 :R:E:E:::T::::::::S:A:L::ATDEK::::::::::V:R:A:TS:::PP-:::::: HVO_0020 HR:R:::::::L:E:::L::V::SRP:::::::::::::I::G::::V:T:A::PRVLGE hla0596 :::SS:::::::::::::V:R:V:::VE::DVDDSAPRTAG:D::GEILRV:VDDV:::: Hut1083 HN:::::::::M:E:::::A:I:R::-RDP:::::::::P::::EGT:IP:::S:::::: Hmu1932 ::::::::::::::::::::V:AP::--D::::::::::::A:::::AIA:PT::::::: consensus --SDAAAGD-VTFCVRPEALRAG---------AG-------TVRLRATVETTEFLGDTTR #oth 1133445.2412121...422412222222213111111113242321.1421.2.2211 VNG2397 :::ECVT::::AVGL:::::SF::::::::::S::::::::G:GFDV:::R:A:R:::YT Hbo0128 ::T::DV:ET:Q::::::H:S:ATMTEAPTET::ETATVPK:N::T:::::::::::V:: HVO_0020 AG:R:G:::EL:::::::Q:::::::::::::::::::::::NKI:G::VD:::Q:A::: hla0596 ::I:V:P::RL:::::::Y::I::::::::::D::::::::ES:I:::::SA::::E::: Hut1083 ::LPNQQ:-:::V:::::DVTL::::::::::D::::::::D:T:S:S::HV:::::AY: Hmu1932 ::::R:R:ES:AVA:::::ITV:RDGADTAATER:::::::::S:::::::V:::::AY: consensus VHCDWAGRELVVRTADA--------PDRGAVELGFDPADAHVLG---- #oth 2312.3.24111315252111111115325231221213232233122 VNG2397 :Y:::::T::L:T:P:P::::::::::::PATVSVASGGID::PE::: Hbo0128 L::R::::SV:::V:AV:::::::::E:DRL::::::GV:TF:-:::: HVO_0020 :RL::G:T::::AVE:GGEQSDAGFEVGATL:V::A::S:::VE:::: hla0596 ITL::G::D:::::R:-:::::::::LS:E:VV::::::::MI:IGEE Hut1083 :::E:N:HAVLAK:GT::::::::::TGD::S::I:A::VT:V:DGKS Hmu1932 :::E:Q::T:::K:DADE::::::::PA:D:T:RV::::VR::-::::