| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 4160 | HVO_0621 | Hbo3654 | hla2333 | rrnAC0789 | Hut1673 | Hut1114 | rrnAC3482 | Hmu2298 |
| 1683 | HVO_0621 | 4257 | 1074 | 1051 | 971 | 941 | 1006 | 963 | 920 |
| 1902 | Hbo3654 | 1074 | 4203 | 1814 | 1062 | 963 | 1004 | 1007 | 919 |
| 1927 | hla2333 | 1051 | 1814 | 4389 | 1008 | 997 | 996 | 918 | 906 |
| 1828 | rrnAC0789 | 971 | 1062 | 1008 | 4310 | 1146 | 1164 | 1165 | 1041 |
| 2040 | Hut1673 | 941 | 963 | 997 | 1146 | 4183 | 1150 | 1359 | 1347 |
| 2096 | Hut1114 | 1006 | 1004 | 996 | 1164 | 1150 | 4148 | 1730 | 1635 |
| 2424 | rrnAC3482 | 963 | 1007 | 918 | 1165 | 1359 | 1730 | 4328 | 2090 |
| 2328 | Hmu2298 | 920 | 919 | 906 | 1041 | 1347 | 1635 | 2090 | 4372 |
634 symbols consensus ---------------------QFSIYLVLLLAAGVVGTAVAILAWRHRDRPGARPLAVLL #oth 1111111111111111112244556646532413322342.442345.363.244.2323 HVO_0621 :::::::::::::::::::::-VV:IIG:MVTS:::SGY::LF::QR:SM:::IG:G::A Hbo3654 :::::::::::::::::::::-------M:FVSVA::::A::::::Q:PE:::T::VA:: hla2333 :::::::::::::::::::VIGL:PLS:A::T:V:T::SA::::::E:PDA::TW::L:: rrnAC0789 ::::::::::::::::::MEF:::W::YTP:LSAA:SLLI:GVGVYY::CT:S:S:VF:M Hut1673 ::::::::::::::::::MVW:::LGV:P:F::TL:A:::::AVF:K::A::G:A:G:IA Hut1114 :::::::::::::::::::::MAA:::AVV:F::II::G::MY:LV::ET:::G:::L:: rrnAC3482 :::::::::::::::::::::MVLSP:TVV:LS::::M:::F:V:L:::::::G::::FV Hmu2298 MIRLGTRLLSTGEGQSRLFVGSEPVS:L:V:::A:::MG::F:V:L::::L::P::::FV consensus LAASWWSVAEGLELAAADLATKLLLADLQWVGVVIIPVAWLLFALEYTGRDRWLTRRRLA #oth 22332.266433215243334344242353533442.22.222333.1.24334444424 HVO_0621 ::SG:::SGYL:::IV::V:L::T:::::::::LVA:I::FF::FS:A::::FTA:PS:C Hbo3654 :GQ::::ACLIFR:R:PTVSS:::W:::A:::::T::::::::S:::::H:EYIHL:SVI hla2333 :GQV::TTFLVF::E:ST::A:A:WY:I::::::LV::G:::::::::::::YVRPGVV: rrnAC0789 V:IA::::MSVI::G:T:::::R:ALK:MYPAIGAV::::::::IQ:::QT:LP::KE:: Hut1673 V::G:::LLA:V::FRT::F:SVV:TKATYF:IAVV::::VV:V:A::::RA::S:S::V Hut1114 :G:AM::FT:::SI::GSA:ST:FW:K:RLSITT:::IS:::LTV:::::::Y:SV:Q:G rrnAC3482 V:::L:A::Y:I:::VPG:S:MER:VQA:LTLS::::::::VTVI::::HPH:::Q::T: Hmu2298 TT::L::M:::::::::GFGEMRT::QTEVILST:::L:::VTV::::::AE:::::::: consensus ALLVEPVITVLLVWTNQP---HGLIWQSRGTV-FDGSGIVLVP-EYGPAYWAHAAYSYLL #oth 32334.3344321312641111624354535435614544666154133123342.3231 HVO_0621 V:S:L:::GLGA::::SL::::H:M:T:VTV:PAV:RA:TILQM:W::L::VVLG::::: Hbo3654 ::SAV:LV:I:::V:A:Y::::N:LYVRP:G:GP::VM::HHG:--:VW:RVITG:T::: hla2333 :AC:A:A::::V:A:GD::::A:::VAN:EVA:DTAV:SF:RV:DP::W:YVI:G:T::: rrnAC0789 GI:LG::LMI:::::::Y:::::WF:S:MELA::Q::LL:S:T::R:::F::WT::A:VV Hut1673 L:G:V::::M:AAI::E:YGI:S:F::DL:FM:T::::TAGSS:Q:::LF:L::::::S: Hut1114 :::I::IAF:::::::-:::::QVVLR:VDI:::A:G:TGVFA:TR:L:::::VS::H:: rrnAC3482 L::I::AVF:T:::S:HA::::E:::SG:::QYVSA:SVT::::A:EVV::G:MS:IL:: Hmu2298 G:::::LLVTV::V:ARR::::A:V:::T::T:VF:NTS:FA::T::I:F:::L:::LA: consensus GAVGSVLLLRLLLRSARLFRAQAIALLLAILAPWVANALFLT---DVVP-TGIDPTPLGF #oth 534.44432323444454215.253.242433.345342223221643414431214322 HVO_0621 WLA:A:VI::TA:DMPDIY:L:::T:V:GT:M:VLG:--:A:TLLELYG:AA::M::AA: Hbo3654 :GT:MLAV:E::TSD:AT::S:GV:::VGL::::LT::::::D::FFM:::::::::IS: hla2333 :LI:::PI:Q:VRDD::P::G:SA:::VGTA::::SSL:HV::::GAI:VP:L:::::A: rrnAC0789 M:::TG:M:K:A:F:G:VY:T:::G:S::A:L::GG:I:Y:::::-G:S:SVF:L:KI:: Hut1673 L::::Y::VE:VVNADL:Y::::GV::M:VV:::S::::Y:A:::N:IQ::PY:::I::I Hut1114 I:L:AF::V::S::TDS:::::ST:::AS:TV:V::Q:A::F:::RF:::R:::::GVA: rrnAC3482 ILA::F::::M:F::NQV:QG:GL::::::TV:T:IQT::VL:::::::::TFN::S::Y Hmu2298 VV::G:F:G:::V::N::H:W:ST:::G::AV:MIVH:::VLDAL:::T:S:F::SS::Y consensus VASGVALLVAILRRRLLDVAPAPRERAREEIFAEMDDAVIVVDTEGRVVDLNRAAADVFD #oth 342133244223143115461221441.342354162413231343314.4.42154324 HVO_0621 TFA:L:CT:::S:YE::ESR:V::WV:::RVVET:A:::V:T::KW::T:V:::::R:LN Hbo3654 SI::::Y:S::S:Y::FGTN:::KV:::QL::DR:QAGA:::::NDHI::T:DSCE:I:G hla2333 AV::::Y:L:LS:F:::TLT::::R:::QLV:EQLH:P:F::G:::H:L::::S:::::E rrnAC0789 :F:::L:GG:VF::Q::Q:I::A::I::D::V:S:KE::::::ERDV:I:::PQ:KAIIG Hut1673 :L:CLL::MTVY:H:F:EIV::A:QL::T:LIKTL::P:V:I:D:RH:::::P::V:::A Hut1114 ::T:AI:T::::::Q::A::AGT::HG:D::LS:LE:L:FM::EA:F:A:C:Q::LETL: rrnAC3482 ::::AV:S:::::GQ::::::VT::LG::A::T::::L::I::D:R:I::V:A::TAL:: Hmu2298 ::A:IV:A:G::Q:K:F:IG:VT::IG::VVL:::N:R:LIL:G:::I::A::::ETL:E consensus GDRDDVIGRPLEAVIPGLADTLPDDRAEI---GELSLELDGEVRYYDVRVTPLSRAYGRV #oth 5445343.3425424152336323545461135533345434423112224334364154 HVO_0621 DTA:ELK:::VGD::DEFS---::Q:DTD:::-QVTVR:GSSQ::FEL:TSAFCDHH::D Hbo3654 M:EQ:IL:A:ADEIV::Y-:R::CEG:LS::::H:TINDETGEHP:::T:::I:NVR:KS hla2333 V::RTAV:EAAST:::RY-:S:NG::GD:::::P::IVGRNGRQP:EIT:RGV:DDH::A rrnAC0789 TPGAAW::::::D:L:::IELRDSPTDD:PDRA:ITVPVN::E:A:E::Q:::H:G::T: Hut1673 AE:M:::::G:S::S:K:::W:DS::::Q:::-TI:Y:V:NVD::::IQ:::::QKAVAD Hut1114 TTA:::::::::T:A:T:::::::GAI:Y::HRVVP:::::T::K:::QQSLIE:PF:D: rrnAC3482 ::QNTLL::S:PQAS:T::E:V:GPGERT::QT:TA::R::S::::::::I::Y::::V: Hmu2298 :A::::L:DT:A::::D::TA:::TST:R::RL:::::SE::::::::::AG::::::VL consensus SGRLISLRDVTDRRQREQ-------RLDVLNRLLRHNLRNEMNVIHGNAELLADDADADE #oth 41332312.12334423.1111111113.2..21..1211242324.3224344653254 HVO_0621 I:HALVF:::::::LNL::::::::Q:E:M::V::::::T:A:LLE:Y:N:VL::I:GG: Hbo3654 I::V:TFH:ISRHLRQQ::::::::::E::::I::::I:T:T:I:::YVDRF:::E::QT hla2333 V::::VFH::GEYLGQQ::::::::::N::::VF::DV:T:T:L:::Y:DQ:MTNPSDER rrnAC0789 T:Q::T:T:::E:K::::RIERQRQ::E:V::V:::DI::D:Q::L:TT:N:LKSQQ:QP Hut1673 ::L:LA:::::A:QHNR::::::::QVS::::::::::S:TVTT::::::YA:ER:RD:: Hut1114 ET:IL:::::::QTR::::::::::Q:::::::::::::::::::R:H:::::EVV:GPA rrnAC3482 ::H::::::I::::::::::::::::::::::::::DI::::::VK:::D::R:T::::: Hmu2298 :::VV::::::E:::::::::::::Q::::::::::::::DL::VR::::::EAAVSGA: consensus -------RERLKRIASTIDDLSDRSRKLGRLFRA-EREEHQPVPLSALLDAVVDDVRRAH #oth 111111455425544534443442433344454543435644541554244234333543 HVO_0621 FDDARDHAKT:QDH:K:LVNI:QKA::::VTRGSDGNGDV:LH:AAVQIR:AA:A::TDF Hbo3654 :::::::---V::R:LR:EEMGRKG:EAIQ::NG:G::G:DSR::::::QQCL:SA::E: hla2333 ::::::ALSIV:KS::R:L:::E:T:TASE::DP:VS:PEP:::::EVV:EA:A:L:AES rrnAC0789 ::::::QLK:I::KGED:VT::E:A:D:E:FVGD:GAV:TTT:D:::VVAD:IA:LE:TY Hut1673 ::::::V::::AV:EDNAAAMM:KQE::D:VL:TF::DSYTCKS:DT::K:::::::T:Y Hut1114 ::::::VQRHVET:MG:V:TVT:::D:V:T:T::FDA:GA:S:D:ELT:RDAIGTIQG:: rrnAC3482 :::::::::::N::M::V::IV:::N:I::VTE:L:T:Q:S:TA:QT:::S::S:AQDR: Hmu2298 :::::::HD:IDQ:T::T:::VAT:D:I::IAD:V::D:RS:IE:CSE:::::R::GPRF consensus PDATVTVD--CPDDIDVSAGASLRIALEELVENAVEHNDSDAP-VAVRVTATVADR--QV #oth 13263433125465542544532552321124.132.344241415.5243653141152 HVO_0621 AC:N:RLV::ELP:R::VCAPT:EPIVR:::::G:Q::G:ST::-V:S:::GWE:D::EL Hbo3654 :EV:FEY:::-:LGD::TVAW:::TV:SNV::::::::T::D::-H:W:RVRE::Q::R: hla2333 :::R:S::::-G:LP:::VP:T::VVASN:CS:::::::AA:::-S:WLE:A:ENG::W: rrnAC0789 ::VEFR:E::R::RAE:::VDLIDS::RNVL:::A::::QSV:E:S:T:MGPTD:G::D: Hut1673 :::KL::::MPETTMSFDGQER::::::::LT::I::DP:::::-::::::::E:::::A Hut1114 :S:HIQF:PAAASG:R:NS:::IGL:F:::LH::I::::A:-:T:R:N:E:DAH:S::G: rrnAC3482 ::VAI:LT:::EN::WIRG:P:VL:::::::::::::QAT::GP:::EI:::R:::TPG: Hmu2298 ::G:::::::::EP:S:T::S::WT::::::D::LR:GG-:::N:T:::AES:::::::A consensus TVAVADNGPGIDAAELEVIESGTETALKHGSGLGLWLVKWGVRQLGGTISFAERDE-GTT #oth 42415.2...1445.43224613.12.4.21.2...115.334541.3331554335.14 HVO_0621 VIRIE::::::N:S::AA:DAHG::Q:R:A::::::::::::D:::::VV:HR:E:G::E Hbo3654 HIS:V:::::::TY::N:L:D:S:::::::::::::IA:::TEIA::N:::S:NNPT:SV hla2333 ELS:::D:::::P::Y::LAH::::P:E::::I:::I::::ID:V::SV:::::EPH::I rrnAC0789 ::::::::::LPDR:Q::::T:::M::::SN:::::IAY:TITTS::::T:::NTPR:SV Hut1673 :IV:T:S::::P:Y:::P:TN:Q::Q:S::::V:::::S:IAHS:Q:SLDIETG:D:::A Hut1114 ::RI::D::::GEQ:RT:::R:S::P:E:S::I:::::A:I::TV::::T:EIT:::::: rrnAC3482 H:::H::::::TDH:R:::R:::::P::::::V:::::N:I::N:::RM::PAT::P::: Hmu2298 R:D:I:D:::::E::IAAVT::G::::H:A::V:::::T:V::GY::::D:DVE:-:::: consensus VTVRLPAAD--------SEHA-D----------- #oth 1224224431111111164555333333332222 HVO_0621 :VL:IQ:VR::::::::::--:-::::::::::: Hbo3654 :::DV:ILS::::::::RDGDR:::::::::::: hla2333 :::SV:TG:AVPINGAG::::ESAESTDSAGTGQ rrnAC0789 I:I:::S:S::::::::A:QPKP::::::::::: Hut1673 I:LTIMSEE::::::::----:-::::::::::: Hut1114 :V::::RG:::::::::DSSK:-::::::::::: rrnAC3482 :ELQ::::E::::::::PA::T:EPAAVHGENAD Hmu2298 ::::::R::::::::::GAVSV:DATPHVTE:::