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6 genomes BUD1436 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0706

HVO_0715

Hbo0821

Hmu0929

Hut0134

hla1348

- -

Pairwise sequence scores
Consensus score3106 HVO_0715 Hut0134 hla1348 Hbo0821 rrnAC0706 Hmu0929
2122HVO_0715 3194 1909 1757 1824 1811 1791
2389Hut0134 1909 3258 1988 1961 2007 1927
2239hla1348 1757 1988 3164 1993 1965 1881
2326Hbo0821 1824 1961 1993 3109 1986 1917
2524rrnAC0706 1811 2007 1965 1986 3626 2459
2436Hmu0929 1791 1927 1881 1917 2459 3339

511 symbols
consensus       -----------------------------------L--VALALVLTLPWVGL----LASG
#oth            111111111111111111111111111112221111322343232.12123211113344
HVO_0715        :::::::::::::::::::::::::::::::::::-:::FG:AL::V::L::::::HTVF
Hut0134         ::::::::::::::::::::::::::::::::::::TA::A:::::::::VVELSR::A:
hla1348         :::::::::::::::::::::::::::::VNLRHP:VA:::T::::V:::::::::FI:Y
Hbo0821         :::::::::::::::::::::::::::::::::::-::----V:V:::::AA::::WVT:
rrnAC0706       MNATLCGKHGLQPTLSQAFQPDPATLPTVSRFRHP:MQ::V::A::VG:IY:::::FI:-
Hmu0929         :::::::::::::::::::::::::::::::::::-::MV:FVYN::VG:::::::::GS

consensus       --------GIALGTLPTVAVSGLAVLGASFLLAWGAETAEKDVPRAFAIAVLAVLAVAPE
#oth            32222222235233242.212.2.11..1.....1.....1...11..1.1..1......
HVO_0715        :::::::::VD:A:GV:::L::I:::::::::::::::::A:::::::L:I:::::::::
Hut0134         LDWMPIDA::::S:G:::L:T::::V::::::::::::::::::::::L:::::::::::
hla1348         GGYGTVHP:ENVTP:AA:V:A:V:I:::A:::::A:::::::::QG::::::::::::::
Hbo0821         A:::::::ASG::H:G::V:::::::::::::::::::::::::::::L:::::::::::
rrnAC0706       ::::::::::EV:NVT:::::::::::::::::::::::::::::::::::::I::::::
Hmu0929         ::::::::VVHF::::E::LT:I:::::::::::::::::::::::::::::::::::::

consensus       YAVDALYAWNAGAGGATTEAAE-------------------AANLAIANMTGANRILIGI
#oth            .........3.123322223232222121122222112111211..1............1
HVO_0715        :::::::::E::INPG:P:S:::::::::::::::::::::::S::V:::::::::::::
Hut0134         :::::::::D:::QAG::AG::::::::::::::::::::::G::::::::::::::::L
hla1348         :::::::::Q::::S:A-----::::::::::::::::::::G::::::::::::::::L
Hbo0821         :::::::::Q:ATDPS------:::::::::::::::::::K::::V::::::::::::L
rrnAC0706       ::::::::::::::::::::CRQFTAAEIESASGGLARACHD::::::::::::::::::
Hmu0929         ::::::::::::::::::::CNALSPAAIEAGETALAGACHD::::V:::::::::::::

consensus       GWSGIALFTVYRAAKTRDD-AVEKRDGFLADAVTLDTDIATEITFLFAATAWAFLVPLGG
#oth            ..11..1.1121.5422.312.34.3.2.4.2.2.14312...2..22..22..11.111
HVO_0715        :::A:::::::::RD:G:E::::S:P:::::V:R::HG:::::L::::::VF::F::::A
Hut0134         :::::::::::::Y:V::::N::::S:::::V::::KALT::::::WL::L:::::::::
hla1348         :::::::::I:::KT:::S::::R:P:::T:::::NR:L:::::::L::::Y:::I::R:
Hbo0821         ::::::::SIFK:IRG:::TS:VN:::Y:R::::::PS:S:::L:::I::VY::F::I:A
rrnAC0706       ::A:::V:::W:::::::P:::T::::::K:::Q:::::::::S:::L::L:::::::::
Hmu0929         ::A:::V:::W::FE:K:P:::QD:E:W:G:S:Q::::::::::::::::::::::::::

consensus       GIDIIDTVVLVGLYVAYIAIIIRSDIEENEEQVGVPAYLQAYPKPKRIASVLSLFVYSGA
#oth            ..143.231...1113..322221222352221...3.1.322113.2122141.41.13
HVO_0715        ::GAV:MF::::::::::FVAMN:P-H:D:::I:::::::S:R::::::TT:::::F::I
Hut0134         :::L::::::::::AS::L:::::G::TEK::I:::G:::S:R::::::T:::::I:::V
hla1348         ::GP::SI:::::F:L::::V::G:V::SDRH::::::F:::::VP:::VI:FG:LF:::
Hbo0821         :::WV::::::::::T:::::::G:VD:HD::::::::F::K::VA:F::::G::A::AF
rrnAC0706       ::G:F::LF:::::::::GLVLK::::H::HT::::K:F:EWSL:W:PLV::A::G::::
Hmu0929         ::::L:::::::I::::::L:LK::::QG::H::::R:::QW:L:W:PL::IV::::::V

consensus       MIFTAVEPFAHGLEQLGLQNGIPEFFMIQWVAPLASESPELIVVAYLVNKARSTAGFNAL
#oth            3.12..1...1...31.333.1.3.1....2............111.......1.1..1.
HVO_0715        V:LV::::::::::A::KSV:::S:L::::::::::::::::::::::::::::::::::
Hut0134         ::LI::::::::::N::::Y:V:K::::::I:::::::::::::V::::::::S::::::
hla1348         I:::::H:::E::::::::Y::::::::::L:::::::::::::::::::::::::::T:
Hbo0821         L:::::::::::::E::::F::::::::::I::::::::::::T:::::::::::A::::
rrnAC0706       ::::::::::::::EI:VA::::::::::::::::::::::::::V::::::::::::::
Hmu0929         V::::::::::::::I:ID::::Q:::::::::::::::::::::V::::::::::::::

consensus       ISSKLNQWTLLIGTLAVVYSISLGAYGVLPFDAKQAAEIWITAAQSFFALAILVNFEISI
#oth            ..............122.1.112.3113.21.32.42.1.1.....1..111121.3.22
HVO_0715        :::::::::::::::VL:::L:::Y::P::L:TH:MG:L:L:::::Y::I:::IT:S::L
Hut0134         ::::::::::::::::I::::AA:GV:::E::Y::SL:::::::::::::::::::N::L
hla1348         ::::::::::::::::I:::::A::V:T:S:::::::::::::::::::I::I:::::NV
Hbo0821         :::::::::::::::V::::::::Q::K::::L::E::::L:::::::::TV::::Q:DV
rrnAC0706       ::::::::::::::I::::::A::G:D::::::R:G::::::::::::::::::::::::
Hmu0929         :::::::::::::::S::F:::Y:::::::::::::::::::::::Y::::::S::::::

consensus       REAVALLVLFISQVVLEFAVIRTLLALPIESHS-------TLLLAYTAVYLLIGVALFVK
#oth            ...23.12..31.13411422244333324332411111143.211122.213.2311.2
HVO_0715        :::::::G::LA:F:--YS:TGLA:T:::PGLGAVTFDGA:S:IGFSV:::VV:TT:::R
Hut0134         ::::::::::V:::FA::M:LNV:SLSHP:AL:H::::::QI::G:::::::::L:M::R
hla1348         ::::V:::::S:::LT::Y::::YAEPAATEV:M:::::::V:Y::::::AV::::::::
Hbo0821         ::::T:::::V::::V:::I:::FPEAVA::::I::::::N:::::::I::::::V:L::
rrnAC0706       :::IG:FA:::::::::::I::D::::::S::-:::::::D::::::GL:V:L::G:::Q
Hmu0929         :::LV:FG::::::I:::VL::EW:::::D:Y-:::::::E::::::::::VA:T::L::

consensus       RREALKALAGLTVRAVRGALGREP---ENAD
#oth            ..23235233224341132533342244532
HVO_0715        :::Q:A:V:K:S::R:::DY:ANEIPAAVE:
Hut0134         ::K:V:EML:M:YEV:QT:F::RS::DFDIE
hla1348         ::KSASK:VRRAISTA:T::----:::----
Hbo0821         :::D::R::S::::N:::EPTP:::::GG::
rrnAC0706       ::::::H:L::AGD:::S:V::::VHL::::
Hmu0929         ::QSVQL:F:::AD:::D:TD::TVHE:F::