|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 3106 | HVO_0715 | Hut0134 | hla1348 | Hbo0821 | rrnAC0706 | Hmu0929 |
2122 | HVO_0715 | 3194 | 1909 | 1757 | 1824 | 1811 | 1791 |
2389 | Hut0134 | 1909 | 3258 | 1988 | 1961 | 2007 | 1927 |
2239 | hla1348 | 1757 | 1988 | 3164 | 1993 | 1965 | 1881 |
2326 | Hbo0821 | 1824 | 1961 | 1993 | 3109 | 1986 | 1917 |
2524 | rrnAC0706 | 1811 | 2007 | 1965 | 1986 | 3626 | 2459 |
2436 | Hmu0929 | 1791 | 1927 | 1881 | 1917 | 2459 | 3339 |
511 symbols consensus -----------------------------------L--VALALVLTLPWVGL----LASG #oth 111111111111111111111111111112221111322343232.12123211113344 HVO_0715 :::::::::::::::::::::::::::::::::::-:::FG:AL::V::L::::::HTVF Hut0134 ::::::::::::::::::::::::::::::::::::TA::A:::::::::VVELSR::A: hla1348 :::::::::::::::::::::::::::::VNLRHP:VA:::T::::V:::::::::FI:Y Hbo0821 :::::::::::::::::::::::::::::::::::-::----V:V:::::AA::::WVT: rrnAC0706 MNATLCGKHGLQPTLSQAFQPDPATLPTVSRFRHP:MQ::V::A::VG:IY:::::FI:- Hmu0929 :::::::::::::::::::::::::::::::::::-::MV:FVYN::VG:::::::::GS consensus --------GIALGTLPTVAVSGLAVLGASFLLAWGAETAEKDVPRAFAIAVLAVLAVAPE #oth 32222222235233242.212.2.11..1.....1.....1...11..1.1..1...... HVO_0715 :::::::::VD:A:GV:::L::I:::::::::::::::::A:::::::L:I::::::::: Hut0134 LDWMPIDA::::S:G:::L:T::::V::::::::::::::::::::::L::::::::::: hla1348 GGYGTVHP:ENVTP:AA:V:A:V:I:::A:::::A:::::::::QG:::::::::::::: Hbo0821 A:::::::ASG::H:G::V:::::::::::::::::::::::::::::L::::::::::: rrnAC0706 ::::::::::EV:NVT:::::::::::::::::::::::::::::::::::::I:::::: Hmu0929 ::::::::VVHF::::E::LT:I::::::::::::::::::::::::::::::::::::: consensus YAVDALYAWNAGAGGATTEAAE-------------------AANLAIANMTGANRILIGI #oth .........3.123322223232222121122222112111211..1............1 HVO_0715 :::::::::E::INPG:P:S:::::::::::::::::::::::S::V::::::::::::: Hut0134 :::::::::D:::QAG::AG::::::::::::::::::::::G::::::::::::::::L hla1348 :::::::::Q::::S:A-----::::::::::::::::::::G::::::::::::::::L Hbo0821 :::::::::Q:ATDPS------:::::::::::::::::::K::::V::::::::::::L rrnAC0706 ::::::::::::::::::::CRQFTAAEIESASGGLARACHD:::::::::::::::::: Hmu0929 ::::::::::::::::::::CNALSPAAIEAGETALAGACHD::::V::::::::::::: consensus GWSGIALFTVYRAAKTRDD-AVEKRDGFLADAVTLDTDIATEITFLFAATAWAFLVPLGG #oth ..11..1.1121.5422.312.34.3.2.4.2.2.14312...2..22..22..11.111 HVO_0715 :::A:::::::::RD:G:E::::S:P:::::V:R::HG:::::L::::::VF::F::::A Hut0134 :::::::::::::Y:V::::N::::S:::::V::::KALT::::::WL::L::::::::: hla1348 :::::::::I:::KT:::S::::R:P:::T:::::NR:L:::::::L::::Y:::I::R: Hbo0821 ::::::::SIFK:IRG:::TS:VN:::Y:R::::::PS:S:::L:::I::VY::F::I:A rrnAC0706 ::A:::V:::W:::::::P:::T::::::K:::Q:::::::::S:::L::L::::::::: Hmu0929 ::A:::V:::W::FE:K:P:::QD:E:W:G:S:Q:::::::::::::::::::::::::: consensus GIDIIDTVVLVGLYVAYIAIIIRSDIEENEEQVGVPAYLQAYPKPKRIASVLSLFVYSGA #oth ..143.231...1113..322221222352221...3.1.322113.2122141.41.13 HVO_0715 ::GAV:MF::::::::::FVAMN:P-H:D:::I:::::::S:R::::::TT:::::F::I Hut0134 :::L::::::::::AS::L:::::G::TEK::I:::G:::S:R::::::T:::::I:::V hla1348 ::GP::SI:::::F:L::::V::G:V::SDRH::::::F:::::VP:::VI:FG:LF::: Hbo0821 :::WV::::::::::T:::::::G:VD:HD::::::::F::K::VA:F::::G::A::AF rrnAC0706 ::G:F::LF:::::::::GLVLK::::H::HT::::K:F:EWSL:W:PLV::A::G:::: Hmu0929 ::::L:::::::I::::::L:LK::::QG::H::::R:::QW:L:W:PL::IV::::::V consensus MIFTAVEPFAHGLEQLGLQNGIPEFFMIQWVAPLASESPELIVVAYLVNKARSTAGFNAL #oth 3.12..1...1...31.333.1.3.1....2............111.......1.1..1. HVO_0715 V:LV::::::::::A::KSV:::S:L:::::::::::::::::::::::::::::::::: Hut0134 ::LI::::::::::N::::Y:V:K::::::I:::::::::::::V::::::::S:::::: hla1348 I:::::H:::E::::::::Y::::::::::L:::::::::::::::::::::::::::T: Hbo0821 L:::::::::::::E::::F::::::::::I::::::::::::T:::::::::::A:::: rrnAC0706 ::::::::::::::EI:VA::::::::::::::::::::::::::V:::::::::::::: Hmu0929 V::::::::::::::I:ID::::Q:::::::::::::::::::::V:::::::::::::: consensus ISSKLNQWTLLIGTLAVVYSISLGAYGVLPFDAKQAAEIWITAAQSFFALAILVNFEISI #oth ..............122.1.112.3113.21.32.42.1.1.....1..111121.3.22 HVO_0715 :::::::::::::::VL:::L:::Y::P::L:TH:MG:L:L:::::Y::I:::IT:S::L Hut0134 ::::::::::::::::I::::AA:GV:::E::Y::SL:::::::::::::::::::N::L hla1348 ::::::::::::::::I:::::A::V:T:S:::::::::::::::::::I::I:::::NV Hbo0821 :::::::::::::::V::::::::Q::K::::L::E::::L:::::::::TV::::Q:DV rrnAC0706 ::::::::::::::I::::::A::G:D::::::R:G:::::::::::::::::::::::: Hmu0929 :::::::::::::::S::F:::Y:::::::::::::::::::::::Y::::::S:::::: consensus REAVALLVLFISQVVLEFAVIRTLLALPIESHS-------TLLLAYTAVYLLIGVALFVK #oth ...23.12..31.13411422244333324332411111143.211122.213.2311.2 HVO_0715 :::::::G::LA:F:--YS:TGLA:T:::PGLGAVTFDGA:S:IGFSV:::VV:TT:::R Hut0134 ::::::::::V:::FA::M:LNV:SLSHP:AL:H::::::QI::G:::::::::L:M::R hla1348 ::::V:::::S:::LT::Y::::YAEPAATEV:M:::::::V:Y::::::AV:::::::: Hbo0821 ::::T:::::V::::V:::I:::FPEAVA::::I::::::N:::::::I::::::V:L:: rrnAC0706 :::IG:FA:::::::::::I::D::::::S::-:::::::D::::::GL:V:L::G:::Q Hmu0929 :::LV:FG::::::I:::VL::EW:::::D:Y-:::::::E::::::::::VA:T::L:: consensus RREALKALAGLTVRAVRGALGREP---ENAD #oth ..23235233224341132533342244532 HVO_0715 :::Q:A:V:K:S::R:::DY:ANEIPAAVE: Hut0134 ::K:V:EML:M:YEV:QT:F::RS::DFDIE hla1348 ::KSASK:VRRAISTA:T::----:::---- Hbo0821 :::D::R::S::::N:::EPTP:::::GG:: rrnAC0706 ::::::H:L::AGD:::S:V::::VHL:::: Hmu0929 ::QSVQL:F:::AD:::D:TD::TVHE:F::