|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 2062 | Hut0712 | hla2044 | rrnAC1206 | Hmu1396 | HVO_B0169 | Hbo3565 |
901 | Hut0712 | 2009 | 706 | 712 | 727 | 753 | 796 |
1358 | hla2044 | 706 | 4657 | 1110 | 1100 | 1134 | 1096 |
1638 | rrnAC1206 | 712 | 1110 | 2132 | 1740 | 1181 | 1190 |
1595 | Hmu1396 | 727 | 1100 | 1740 | 2157 | 1196 | 1193 |
1484 | HVO_B0169 | 753 | 1134 | 1181 | 1196 | 2056 | 1529 |
1508 | Hbo3565 | 796 | 1096 | 1190 | 1193 | 1529 | 2066 |
614 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hut0712 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2044 VIASTRSLTVRTETGPTEVVCREFADETRDCASDLTAVPRSLRRSRGLGRPARRRRRRGR rrnAC1206 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1396 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_B0169 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3565 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -----------------------CRDD--------------------------------- #oth 111111111111111111112323212111111111111111111111111111111111 Hut0712 :::::::::::::::::::::MPE::G::::::::::::::::::::::::::::::::: hla2044 DRDPRAVQRAVRAGRVPAPTGPG:::GRGARVRGRARGRRALDGASRRSRRTPVRRGVRR rrnAC1206 ::::::::::::::::::::MTG:H::::::::::::::::::::::::::::::::::: Hmu1396 :::::::::::::::::::::::-MT:::::::::::::::::::::::::::::::::: HVO_B0169 :::::::::::::::::::::::V::E::::::::::::::::::::::::::::::::: Hbo3565 :::::::::::::::::::::::V::E::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hut0712 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2044 ARDGLRCGDGRCGRRDSGRRGARVRPRNGAARNLLRASTGRHRADVRARRRALARRDGRT rrnAC1206 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1396 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_B0169 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3565 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hut0712 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2044 RWVPLPSGRIRRVPRGGDPPRGSGRGRPGRPRCRRTRVRGGRRRERRRAVRYRERAARRI rrnAC1206 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1396 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_B0169 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3565 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 Hut0712 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2044 RRRREPAPARRDRRVRRGRCRRFRVPRRRRAARDRRGPPASRGRPRDAGGRDRRLSRRGA rrnAC1206 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1396 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_B0169 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo3565 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ---------------------------DE---ATDGPPDPQLDPERSPGLGADIDGLEDI #oth 111111111111111111111111111222222222321.12111411113323421211 Hut0712 ::::::::::::::::::::::::::::H:::-----RS::A:-----D:AEREGNHPEV hla2044 RGARRGRVLREGGRAGRTERYRGEYPMRDPDE:::::T::RVH::E:::F:EEP:::::: rrnAC1206 :::::::::::::::::::::::::::::FEKHLEED:::::::::::::HT::EA:::: Hmu1396 :::::::::::::::::::::::::::::FEKHLEEE:::::::::::::H::::A:::: HVO_B0169 :::::::::::::::::::::::::::E::::::::::::::H::Q:::F:V:PV::::: Hbo3565 ::::::::::::::::::::::::::::::::::::::::::H::N:::FD::TS::A:: consensus EVSR-DVTIGEASPAELAASDTEPVEDDAVADLLADLAADAAVERRRAALALAERAPTEA #oth 111.2...1.2.122112.2..2.12233323112214313421.1....1.32134224 Hut0712 TT::A:::L:Q::E:DF::A::D::A:ESECA::DR:D::::T::Q:::::::G:D:G:: hla2044 ::::::::::D:::R::Q:T::A:LRGTDA:EKI:::VDGDP::::::::::G:GR:::: rrnAC1206 ::::E:::::::T:E::::::::::A:::::S::S:IEHG:KTD::::::E:KD::S:DE Hmu1396 ::::A:::::::T::::::A::::::G:DPSE::::::::SEID::::::::KD::T::T HVO_B0169 ::D:::::::::TL:D:G:::::::::HP:S::::S::G:G::::::::::::::EGDRV Hbo3565 ::D:::::::D::L::::::::::::S:::::::SS:SG:DV::::::::::S::ER:DP consensus IVAALARAATTDDDADVRQFAVEALAAHG---------GERAAEAAVALLDDPDPWVRAE #oth 3231.242223.3122.......1.22111111111111241212123132.11....1. Hut0712 AID:::DRTRD:PE:T:::::::::GELA:::::::::-:SMP::VRSATE::::::::: hla2044 SLD::IEYGLA::::::::::::::GEL::::::::::::::G:::::AC:::::::::: rrnAC1206 ::::::::::::::S::::::::::T:::::::::::::::::AV::E::G::N:::::: Hmu1396 :::G::Y:::N:P:D::::::::::T:::TDAGSGTET::A::AV::E::::::::::S: HVO_B0169 V:E::S::::::E::E::::::::::K::::::::::::DL:::T:R::T:::::::::: Hbo3565 ::QG::H:::::A::::::::::S::KL:::::::::::PV:::T:SV:V::E::::::: consensus AVVALDRLDREAHADRIEAALDDDHHAVRRNAAISLFKLRGEAAADELLELSDDDSERVR #oth .1.2..221.22.133123.1..2...11...31..1.2...23223.1322212.1.1. Hut0712 :I::::H::::G:::::VD::::E::::::::V:::W:G:::DVLP:::G:V::E:D::: hla2044 :::::::IG:SE::PT::T:::::::::V:::MV:::::::::LCSV:::::HA::::L: rrnAC1206 :::T::NV:::::E:D:A::I::::::::::::::::::::::M::L:::Q:H::::::: Hmu1396 ::::::N::::::ESDL:T::::::::::::::::::::::::M::L:::Q:R::::::: HVO_B0169 ::::::::::GE:EAV:::::::E:::A::::LV::::::::G:C:A:VAAA::P::::: Hbo3565 :::S::::::G:::::::G::::A:::A::::::::::H:::D:LP:::D:A::P::::: consensus EWAAHLLGGVDDDRARERLRRLA-DDEAS-VVRQTAVRALDVDPGRFRRQFGGALENDDR #oth ..1111.1113321.422.431231123211.13..2112221313111113.2122232 Hut0712 ::V:E:::RIGHPD:EDA:TQ:RA:::S-:I:AK::AN::--:G:DSIPGPP:GTAP:GT hla2044 :::V:::A::::E::TS::DAV:N:ETQ:K:::S:::::::A:::K:::::S:GT:::SA rrnAC1206 :::::M:::::E::::::::E:T:::P:T:::::::E:S:::::::::::::::::::A: Hmu1396 :::::M:::::E::::D:::E:T:::P:T:::::::E:::E:E:R:::::::::::::S: HVO_B0169 ::::::::::ET:::A:A:S:::::::Q:::::E:::::QE::S:S:::::T:V:DET:: Hbo3565 :::::::::IA::::H:T:E:::EE::R:::::E:::::R:::A:S:::::S:::DES:: consensus DLPGEDRLNRMPDL #oth 211.12211.3.2. Hut0712 :PS:--TRD:S:Q: hla2044 :::::ST:::R::: rrnAC1206 L::::::::::::: Hmu1396 L::::::::::::: HVO_B0169 T:::::D:::T:N: Hbo3565 T:::::D:::T:::