Home |  Text search
[I] (CaiA) COG1960 Acyl-CoA dehydrogenases
6 genomes BUD1455 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0679

rrnAC0770

HVO_1140

Hbo0417

Hmu0953

- -

NP1596A

-

Pairwise sequence scores
Consensus score2836 VNG0679 HVO_1140 Hbo0417 NP1596A rrnAC0770 Hmu0953
2443VNG0679 2979 2304 2339 2275 2256 2222
2503HVO_1140 2304 2850 2518 2317 2313 2350
2569Hbo0417 2339 2518 2853 2368 2374 2338
2554NP1596A 2275 2317 2368 2857 2423 2405
2557rrnAC0770 2256 2313 2374 2423 2873 2599
2544Hmu0953 2222 2350 2338 2405 2599 2941

408 symbols
consensus       -----------------MDFALTAEQRQIQDMVAEFVDEEVKPRAAEIDETDEFPADLVD
#oth            11111111111111111...2211.12..31..1....1.12.1.111.12....3..12
VNG0679         MGFRDANSKGQTDKAYH:::TRS::HD::AE:::::::::::::::T::KA::::::::A
HVO_1140        ::::::::::::::::::::::::::K::KE::S:::::::::::::::::::::::::A
Hbo0417         ::::::::::::::::::::::S::::::R:::S::::::IR:::::::::::::D::IS
NP1596A         :::::::::::::::::::::::::::::K:::S:::::::V:V:D:L:KN::::W::::
rrnAC0770       ::::::::::::::::::::SP:Q::::::::::::::D::::::::::::::::W::::
Hmu0953         :::::::::::::::::::::P:Q::::::E::::::::::V:::::::::::::Q::::

consensus       EMADLGLMGMPFPEEYGGAGLDYHSYAIALEEIARGSGGLGTIVAAHISLAGNMIYEFGN
#oth            1122.......1....1..1....2.131.1..1........1....1...1..2.11.2
VNG0679         ::S:::::::::::::D:::::::T::T::S:::::::::::V::::T::::::V::Y:S
HVO_1140        ::GQ::::::::::::::::::::::::G::::S:::::::::::::T::::::L:::::
Hbo0417         :::E::::::::::::D:::::::::::G::::S::::::::V::::T::::::L::::D
NP1596A         :L:E::::::::::::::::::::A:PA::::::::::::::::::::::::::V:K:::
rrnAC0770       :::::::::::I:::::::E:::::::M:::::S:::::::::::::::::C::::::::
Hmu0953         Q::::::::::I::::::::::::A::M::::::::::::::V::::::::C:::::::D

consensus       EAQKEEYLTPLAEGEDIGAFALSEAGAGSDVPAMETTAEKDG---------DEYVINGGK
#oth            12..23..11.24.21........1.........2...4211121111111.1.112.2.
VNG0679         DD::HD::A::SR:D:::::::::::::::::::::::QR::::::::::::A:::S:E:
HVO_1140        :E::QT:::::N::T:::::::::P:::::::::::::V::::::::::::::::VD:::
Hbo0417         ::::Q::::S:NT:::::::::::::::::::::D:::T::D::::::::::::::::::
NP1596A         DE::::::::::Q::E::::::::::::::::::G:::::::::::::::::::::::D:
rrnAC0770       :::::T::::::A::E::::::::::::::::::D::::PVDGG::::::::A:LV::::
Hmu0953         :::::A:::::::::E::::::::::::::::::::::KPV:GDPHEGEEP::::VD:::

consensus       LWISNGSVADTVTVFAKTDPDAGNKGISSFIVRPEEDDGFIVEGTEDKLGDKGCPTAELR
#oth            ............11......1..11.....1...22....3.1...1.............
VNG0679         :::::::::::::::::::::::HR:::::::::A:::::::A:::::::::::::::::
HVO_1140        ::::::::::::V:::::::::::::::::V::::V::::V:::::H:::::::::::::
Hbo0417         ::::::::::::::::::::::::::::::V:::::::::::::::::::::::::::::
NP1596A         ::::::::::::::::::::E:::::::::::::DT::::Y:::::::::::::::::::
rrnAC0770       ::::::::::::VL::::::E:::::::::::::::::::::::::H:::::::::::::
Hmu0953         ::::::::::::VL::::::E:::::::::V:::::::::H:::::H:::::::::::::

consensus       FDDMRIPADRLLGEEGRGFVQALKTLNGGRITIAARSVGIARAALDDALDYAQDREQFDQ
#oth            ..1112.11.2..21.2..11..1............11.1.1....1.34..21.1..1.
VNG0679         :::::V::::::::::D::KH::E:::::::::::::::L::::::::RE:::::D::G:
HVO_1140        :::::::E:::::G::D::::::::::::::::::::I::::::::::VT::GE::::::
Hbo0417         ::E::::E::::::::E::::::::::::::::::::I::::::::::VA::D:::::::
NP1596A         :::L:::ES::::D:::::::::::::::::::::::::::Q::::E:A:::::::::::
rrnAC0770       ::E:::::::M:::::::::H:::::::::::::::G::::Q::::E::Q::::::::::
Hmu0953         ::::HL::::R:::A:::::H:::::::::::::::G::::Q::::E:::::GE::::::

consensus       PISDFQAIQHKLADMDTKTQAARLLMHKAADLKIRGESFIKEAAQAKLYASEISREVANE
#oth            1.21..1.1.1.......22..31...2...1.111.212............1.......
VNG0679         A:::::T:::::::::::L:::E:::::::::::::::::::::::::::::::::::::
HVO_1140        ::G:::::K:E:::::::V:::T::::::::::M:D:T::::::::::::::::::::::
Hbo0417         ::AE::::K:::::::::V:::KM::::::::::::::Y:::::::::::::::::::::
NP1596A         :::::::::::::::::::R:::::::D:::K:::::::A::::::::::::V:::::::
rrnAC0770       :::::::::::::::::::::::::::Q:::K:MA::::V::::::::::::V:::::::
Hmu0953         ::G::::::::::::::::E:::M:::::::K:::::N:V::::::::::::V:::::::

consensus       GIQIHGGYGYTKDFPAERFYRDAKLNEIYEGTSEILRNTIADQLLD--
#oth            ...1..........21..1...............1.....133.2321
VNG0679         ::::::::::::::D:::Y::::::::::::::::::::::NE::E::
HVO_1140        ::::::::::::::A:::Y:::::::::::::::::::::G:W:QK::
Hbo0417         ::::::::::::::::::Y:::::::::::::::::::::G:R:RQEQ
NP1596A         ::::::::::::::::::::::::::::::::::V::::::A:::EN:
rrnAC0770       :::V::::::::::::::::::::::::::::::V::::::SE:::::
Hmu0953         :::::::::::::::V::::::::::::::::::V:::::::::::::