Home |  Text search
6 genomes BUD1471 6 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi
-

rrnAC2192

HVO_1205

Hbo0355

Hmu0419

Hut1650

 -

NP2106A

 -

Pairwise sequence scores
Consensus score1253 NP2106A Hut1650 Hmu0419 rrnAC2192 HVO_1205 Hbo0355
658NP2106A 1225 508 519 518 565 513
935Hut1650 508 1247 822 833 641 606
981Hmu0419 519 822 1250 821 642 681
887rrnAC2192 518 833 821 1266 616 633
804HVO_1205 565 641 642 616 1236 711
812Hbo0355 513 606 681 633 711 1224 

175 symbols
consensus       MKVYDGSQTEQRS--TPERIKVGIADYAVATDEATLTTSGLGSCIGVALYDPEAGVSGLV
#oth            121123321143322321.2..1..112.22342211.......2.2111.3333121.1
NP2106A         ----MAALPAESD:::S:::::S:::::::-EAG:IS:::::::L:L:I::::::::A::
Hut1650         :::::::::::S:::::::::::::E:D:S:NG:::S::::::::::G:H:E:SS:::::
Hmu0419         :::::::::::E:VGQ:::K:::::E:::T::::V:::::::::::::::::DSNTA:::
rrnAC2192       ::::::::::SPEQS::::::::::E:K:T:EP:M:::::::::::I:I::TRNT:A:::
HVO_1205        :Q::TTDTPAA::::--G::::::::F::SS::S:::::::::::::::::::T:::::A
Hbo0355         ::::TSNT::T:T::L:::T:::::::::::GN:::::::::::V:I::::SQ:::G::A

consensus       HVMLPRADE-DGGNPAKFADTGIEALIEAMEDAGADRRRIRAKIAGGSDMLDFSSNDGSS
#oth            .2...43233223431111.1114312311433..324322......12121.2221.21
NP2106A         :P::::R:GN:DRP:ER:V:S::DVVVD:LLEH::SKASL:::::::AAVV::G:D::D:
Hut1650         :::::VSE:VN:::::::::::VKT:VREL::H::::SN:V:::::::::::::K:-::G
Hmu0419         ::::::H:::GE:AR:::::::V:V:L:E::R:::Q::SME:::::::::::::E:-:::
rrnAC2192       :::::S:ADI::::H::::::::Q::::::A::::STEAME:::::::::::::E:-:::
HVO_1205        :A:::E::-:::SE::::V:::V:L::AE:QAV:::TD::V:::::::T:F::T:A::DG
Hbo0355         :A:::Y::-:GDTDE::Y:::A:R::L:::VEK::K::::::::::::T:FE:::A::-:

consensus       -IGDRNAAAVRETLAARDIPIVGEDVGGDHGRSLRLDAATGDLIVKSANRGSATL
#oth            1..3..2432211.245112211.12..22..12212331.123.2114523521
NP2106A         ::::::IEVA::E:SD:G:EL:::E::::C::TVKV::::::VN:SRTDGEET::
Hut1650         :::V:::NV:E:::S:L::::::::I:::::::I::EGD:::::::::::D:KR:
Hmu0419         :::S::::I:::::::N:V::L:::::::Y::::::K:::::::::::SQ:T:::
rrnAC2192       :::S:::KK:::::DEHGV:V::::L:::::::VK:E:D::NF::::::TD:I::
HVO_1205        S:::::V::T:T::DGFG:DV:A:::::S:::::E::SE::::R:R::KS:THV:
Hbo0355         :::E:::V:AK::::RE::DL:A:::::E:::::E::VSN:N:E:R::HV:KD:I