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[R] (-) COG3413 Predicted DNA binding protein
6 genomes BUD1478 7 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0826

rrnAC1217

HVO_B0361

-

Hmu2315

Hmu3417

-

hla1176

NP0136A

-

Pairwise sequence scores
Consensus score1559 NP0136A hla1176 rrnAC1217 HVO_B0361 VNG0826 Hmu2315 Hmu3417
630NP0136A 1649 405 363 444 479 429 420
704hla1176 405 1504 467 497 512 443 380
850rrnAC1217 363 467 1591 879 618 587 533
949HVO_B0361 444 497 879 1577 628 625 572
945VNG0826 479 512 618 628 1667 742 643
982Hmu2315 429 443 587 625 742 1678 876
904Hmu3417 420 380 533 572 643 876 1673

243 symbols
consensus       ----TEGSAAKPADD--ERRLRVVLEIDPSDDASCPLADF---DGDVE--AVRQQLDGDD
#oth            1222434435554513242313131214133333.1163422123424113225254323
NP0136A         ::::--M:SP::NA:::-GH:::::AVT::P::::HILGSGK:R:T:TKRDL:SDD:SGE
hla1176         ::::----M:EA:E:::G:::::D:D::::::WE::IVSE:::TP:AS::::AVNAV:HE
rrnAC1217       MDQSES:LTGTTTGTAS::TIE:LF::ELP::C::::S:P::::A:I:::N:HN:I:DGV
HVO_B0361       MADS:S:V:EAK::TLR:QH:QLL:::E:AKRC:::::GP::::SA::::D:HT:::::V
VNG0826         :::MS:RT:SQ:NT:RSR:::::::DVAL::A:A:::EEI:::::E:T:::::H:YT:::
Hmu2315         :::M::DT::DREST::T:D:Y::F:V:::PESD:::G:::::::R:D::EI:::FA:::
Hmu3417         ::::MQ::TT:QG::::G:D:Y:AF::K:VL:SD:::DE:EDA::::V::E:::::LH:Q

consensus       CHADVTV-------SPDDDAADVVHATSQVDDACLCRAFGEFGCVPRIRRVDDETIVVET
#oth            .23232312223234324264522243341333.3.52.4322.1143432332335221
NP0136A         :TCKAEA::::::::L::GP:QL:E--:D:TNG:V:P::R:HD::ASLDGFE:G:LI:SV
hla1176         :TV::QP:::::::TG::G---L:R:RGE:S:D::::I:QG:::::HV:::E:G:ML:T:
rrnAC1217       :::EM::::::::::DETGTPR:L:S:N::G:::::L::S:V:::::T::::GDSLFI::
HVO_B0361       :::E::::::::::-G:G::SK:::::TS:G:D::::::A::E:::::::A:G:C:::::
VNG0826         :::::::::::APAC::::RS::M:VAT:TT:S:::CV:SDH::::Q:TA:AAD::T:::
Hmu2315         ::T:T::QTSDCDCE::S:CTE:::T::A::ES:P:TV::::::::ELSA:T::RM:L::
Hmu3417         :QTEM:IQSEETPV::GCEE::I::SA:E::G::F:AV::A:D:I:E:VD:TE:SVC:::

consensus       YLPDRERLTDLVEALREVADRVRLRRLTR-DAGDGETDSHT-ATLDLDALTEKQREAATI
#oth            113..532221.35.33334414.22122225545443353131311362.4....1255
NP0136A         AV::::E::SV:AE:::RGAT:K:::I--::SSAVGS:RRV:LR::A:GI:::::::VQV
hla1176         :VD:::TVR:V:G::::AL:H:::V::--:AVVE:PEATEQ:V:F::S:::P::::GLEL
rrnAC1217       :VS::SVISE:::Q:QPA:E::::::::-:SRQ:NK:E:DP:::V::AC::T::::::I:
HVO_B0361       ::S::AVI:::::R:D:LTE::C:::::S::GRGDS:E:K::::I::SS::A::::::L:
VNG0826         ::A::TT:::::AD:KA::NT:S:TH:::LA:D:QSG::::HV::::FK::D::::::AA
Hmu2315         :::::D::SE::D::KA:::GL:::Q:K:I:N:TT:RGR::::::::FEV:::::::V:K
Hmu3417         :::::N:::E:::S::D:TRELH::Q:K:I:::T:::GGQ::I::A::DV:::::::V:R

consensus       AVAAGYYETPRETDLGDLADALGISKSALSQRLNAVESKLATAAFDEA------------
#oth            .244..1331.423.43..44121.1..21...311121.12321343543422221111
NP0136A         :AD:::::::::A::SE:::Q::V:R::V::::T:::T::VEELVQAEKNGWPGPQPASV
hla1176         ::VR::FDND:NVE:::::AEIE::::::::::R:AQA::V:DV:::VE:::::::::::
rrnAC1217       ::DE:::QQ::Q:T:D:::ST:::::::::::::::::::::::::P-::::::::::::
HVO_B0361       ::HH:::::::R:E:AT::E:::::::::::::::::A:::::V::SE::::::::::::
VNG0826         :::K:::A:::GA::S:::T::::::::V::::S::::::::S::T::QQSAGSAP::::
Hmu2315         :IG:::::S::::S::E::TD:D::::::T::::S::::::::::A::SADG::::::::
Hmu3417         :::::::A:::::S:EA:::D:::::::C:::::::::T::VS::AN:TTSR::::::::

consensus       ---
#oth            111
NP0136A         GDR
hla1176         :::
rrnAC1217       :::
HVO_B0361       :::
VNG0826         :::
Hmu2315         :::
Hmu3417         :::