|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 1559 | NP0136A | hla1176 | rrnAC1217 | HVO_B0361 | VNG0826 | Hmu2315 | Hmu3417 |
630 | NP0136A | 1649 | 405 | 363 | 444 | 479 | 429 | 420 |
704 | hla1176 | 405 | 1504 | 467 | 497 | 512 | 443 | 380 |
850 | rrnAC1217 | 363 | 467 | 1591 | 879 | 618 | 587 | 533 |
949 | HVO_B0361 | 444 | 497 | 879 | 1577 | 628 | 625 | 572 |
945 | VNG0826 | 479 | 512 | 618 | 628 | 1667 | 742 | 643 |
982 | Hmu2315 | 429 | 443 | 587 | 625 | 742 | 1678 | 876 |
904 | Hmu3417 | 420 | 380 | 533 | 572 | 643 | 876 | 1673 |
243 symbols consensus ----TEGSAAKPADD--ERRLRVVLEIDPSDDASCPLADF---DGDVE--AVRQQLDGDD #oth 1222434435554513242313131214133333.1163422123424113225254323 NP0136A ::::--M:SP::NA:::-GH:::::AVT::P::::HILGSGK:R:T:TKRDL:SDD:SGE hla1176 ::::----M:EA:E:::G:::::D:D::::::WE::IVSE:::TP:AS::::AVNAV:HE rrnAC1217 MDQSES:LTGTTTGTAS::TIE:LF::ELP::C::::S:P::::A:I:::N:HN:I:DGV HVO_B0361 MADS:S:V:EAK::TLR:QH:QLL:::E:AKRC:::::GP::::SA::::D:HT:::::V VNG0826 :::MS:RT:SQ:NT:RSR:::::::DVAL::A:A:::EEI:::::E:T:::::H:YT::: Hmu2315 :::M::DT::DREST::T:D:Y::F:V:::PESD:::G:::::::R:D::EI:::FA::: Hmu3417 ::::MQ::TT:QG::::G:D:Y:AF::K:VL:SD:::DE:EDA::::V::E:::::LH:Q consensus CHADVTV-------SPDDDAADVVHATSQVDDACLCRAFGEFGCVPRIRRVDDETIVVET #oth .23232312223234324264522243341333.3.52.4322.1143432332335221 NP0136A :TCKAEA::::::::L::GP:QL:E--:D:TNG:V:P::R:HD::ASLDGFE:G:LI:SV hla1176 :TV::QP:::::::TG::G---L:R:RGE:S:D::::I:QG:::::HV:::E:G:ML:T: rrnAC1217 :::EM::::::::::DETGTPR:L:S:N::G:::::L::S:V:::::T::::GDSLFI:: HVO_B0361 :::E::::::::::-G:G::SK:::::TS:G:D::::::A::E:::::::A:G:C::::: VNG0826 :::::::::::APAC::::RS::M:VAT:TT:S:::CV:SDH::::Q:TA:AAD::T::: Hmu2315 ::T:T::QTSDCDCE::S:CTE:::T::A::ES:P:TV::::::::ELSA:T::RM:L:: Hmu3417 :QTEM:IQSEETPV::GCEE::I::SA:E::G::F:AV::A:D:I:E:VD:TE:SVC::: consensus YLPDRERLTDLVEALREVADRVRLRRLTR-DAGDGETDSHT-ATLDLDALTEKQREAATI #oth 113..532221.35.33334414.22122225545443353131311362.4....1255 NP0136A AV::::E::SV:AE:::RGAT:K:::I--::SSAVGS:RRV:LR::A:GI:::::::VQV hla1176 :VD:::TVR:V:G::::AL:H:::V::--:AVVE:PEATEQ:V:F::S:::P::::GLEL rrnAC1217 :VS::SVISE:::Q:QPA:E::::::::-:SRQ:NK:E:DP:::V::AC::T::::::I: HVO_B0361 ::S::AVI:::::R:D:LTE::C:::::S::GRGDS:E:K::::I::SS::A::::::L: VNG0826 ::A::TT:::::AD:KA::NT:S:TH:::LA:D:QSG::::HV::::FK::D::::::AA Hmu2315 :::::D::SE::D::KA:::GL:::Q:K:I:N:TT:RGR::::::::FEV:::::::V:K Hmu3417 :::::N:::E:::S::D:TRELH::Q:K:I:::T:::GGQ::I::A::DV:::::::V:R consensus AVAAGYYETPRETDLGDLADALGISKSALSQRLNAVESKLATAAFDEA------------ #oth .244..1331.423.43..44121.1..21...311121.12321343543422221111 NP0136A :AD:::::::::A::SE:::Q::V:R::V::::T:::T::VEELVQAEKNGWPGPQPASV hla1176 ::VR::FDND:NVE:::::AEIE::::::::::R:AQA::V:DV:::VE::::::::::: rrnAC1217 ::DE:::QQ::Q:T:D:::ST:::::::::::::::::::::::::P-:::::::::::: HVO_B0361 ::HH:::::::R:E:AT::E:::::::::::::::::A:::::V::SE:::::::::::: VNG0826 :::K:::A:::GA::S:::T::::::::V::::S::::::::S::T::QQSAGSAP:::: Hmu2315 :IG:::::S::::S::E::TD:D::::::T::::S::::::::::A::SADG:::::::: Hmu3417 :::::::A:::::S:EA:::D:::::::C:::::::::T::VS::AN:TTSR:::::::: consensus --- #oth 111 NP0136A GDR hla1176 ::: rrnAC1217 ::: HVO_B0361 ::: VNG0826 ::: Hmu2315 ::: Hmu3417 :::