| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||
|---|---|---|---|---|---|---|---|---|
| Consensus score | 3329 | hla0779 | hla1277 | HVO_2813 | Hbo2551 | Hmu1791 | NP4274A | rrnAC1089 |
| 1826 | hla0779 | 3384 | 1558 | 1589 | 1543 | 1188 | 1592 | 1545 |
| 2662 | hla1277 | 1558 | 3109 | 2542 | 2473 | 1544 | 2030 | 2038 |
| 2872 | HVO_2813 | 1589 | 2542 | 3388 | 2862 | 1482 | 2219 | 2157 |
| 2783 | Hbo2551 | 1543 | 2473 | 2862 | 3370 | 1479 | 2174 | 2098 |
| 1807 | Hmu1791 | 1188 | 1544 | 1482 | 1479 | 2514 | 1629 | 1681 |
| 2449 | NP4274A | 1592 | 2030 | 2219 | 2174 | 1629 | 3388 | 2344 |
| 2416 | rrnAC1089 | 1545 | 2038 | 2157 | 2098 | 1681 | 2344 | 3347 |
464 symbols consensus -----------MSDSADPVRVGVLSLHNSKETKAILNAVDDLGHEPVWLRAENTAISIED #oth 11111111111244432432.....1.1...1...1...221.1121...3..1122122 hla0779 MSENSGSAPSRTT:::S::::::::F:::::::::::::HA:::::::::E::ARSW::A hla1277 :::::::::::--M:S:::::::::::::::::::C:::E::::::::::E::A:::V:: HVO_2813 :::::::::::::TTD:A:::::::::::::::::::::E::::::::::R::A:V:::: Hbo2551 :::::::::::::GDG:S:::::::::::::::::::::::::::G::::R::::::::N Hmu1791 ::::::::::::N:A:::-T::::::::::::::::::::A::YDTE::::::::VDVR: NP4274A ::::::::::::ASMS:VLS:::::::S:::S:::::::::::YDTE:::T::::VD:T: rrnAC1089 :::::::::::--M:DRDIT:::::::S:::S::::::::EM:YDTE::::::::::VT: consensus GEVTLEPDVDIVANRLLLSNTEQPAELLGLATTFARIRPMLNEPAAVLAAIHKFATAATL #oth .32221.2.1112....112322.2131.113234133.2..2.6133212..112221. hla0779 :NLRFD:::EV:S::::TTKAA::LDD::I::SY:ASC:V::P::V:VQ:M::YGA:::: hla1277 :D:SV::A:::I:::::::::D::::::::::::E:::::::::N::::S:::::::::: HVO_2813 ::::V::E:::I::::::::::E:::::::::::N:::::::::D::::::::::::::: Hbo2551 :::SV::E:::I::::::::::E::::::::S::Q:::::::::S::::::::::::::: Hmu1791 :D::::::::V:V::::::SD:::V:GI:::H:L::LV::::P:E:ITT:L:::::TMA: NP4274A :S::::::::::V::::::KE:::::A:::::MLE:A:::::T:T:TMT:M:::::GTA: rrnAC1089 ::M::::A::V::::::::SD:H:::GI::GM:IS:LA:T::::M:ATT:L::::S::A: consensus ANANIPVPDALLALSNDRLNEGRDRFGDVAVYKTAIGTHGGGTWKVDLTEPVNPKVGNRQ #oth 131212....11.112221.1314211232.1.1....1.11113112234.113114.2 hla0779 TA:G::::::YM:FTHRTI:::NRLTSEK::H:S::::N:ARMSI:GADDT:S:HIAH:R hla1277 :DW::R:::::::::::::::::E:::E:G::::::::::::::::::::R::::::::: HVO_2813 ::W::Q::::::::::::::K::E:::::G:::S:::::::::::::::::::::::::: Hbo2551 ::W::R::::::::::::::KD:::::::G:::S::::::::::::::::A::::::::: Hmu1791 :E:GV::::::::::SE::::::A::::R:::::::::::::::L:::DD::::Q::L:: NP4274A :E:D::::::YM:::S:L:::R:GQ::PEV:::::::::::::::L:TEST:::M::S:: rrnAC1089 :D:GV::::::::::S:L:::E::::::R:::::::::::::::M:::ENQ::AQ::G:Y consensus AFLQELIDRDDQRHRDLRVYVVDDRIVGAMNRYAPDGDWRTNVALGGDVEDATDELPDEA #oth ....32213134122.1.1.1.12411.1.2....211......1.13.213.211.211 hla0779 :::::F::TGTE:PF:V:A:::::::::::K::::PDE::::::V:AE:::F:AD::E:: hla1277 ::::K::::::EE:::::::I:G:E:I:S:Y::::E:::::::::::A::::::DM:::: HVO_2813 ::::R:::::GD::::::::I::GD:::::Y::::E:::::::::::::L:::::M:::: Hbo2551 ::::D::E:::T::::::::I::GE:I:::Y::::::::::::::::::MN::::M:E:: Hmu1791 :::::YL:V::::NH::::::::GVV:::::::::::::::::::::::::V::D::P:V NP4274A :::::::EH:EH::H:::::::GE:::::::::::::E:::::::::S:::::::::::: rrnAC1089 :::::YMEH:E:::H:::::::G:Q::::::::::E:E:::::::::E:::M:G:::ERV consensus AETALYAADVMGLDYAGVDLVEGDDGWYVLEVNPTAGFKGLFKATGTSPAPHIAKLAIER #oth 3431341112321..1...122231111...1.1....1..12.113....2..3....2 hla0779 :RLSRE::::LD::::::::LCR:GA:::::::A::::::::E::::::::F::G::::: hla1277 ::::::S::::D:::::::::::Y::::::::::::::::::E::::::::Y:::::::A HVO_2813 KQ::::::E::EM::V:::::::::::F:::A:::::::::YQ:::K::::::::::::: Hbo2551 R:::::::E::E:::V:::::::E:::F:::::::::::::Y:::NR::::F:::::::Q Hmu1791 :DM:TT::::L::::::::II::A::YF::::::::::R:::::::::::::::R::::A NP4274A VSM:KR:::EV::::::::I:Q:E::Y:::::::::::R::Y::::R:::::::R::::: rrnAC1089 R:I::DSV:AI::::::::I:QS:::Y:::::::::::R:::::S:V::::Y::Q::::: consensus AGGEVDDDRVERLAATLDDSRPACAPRKPQPNPGEAPLIGYIEEVVVTGTSGSTQALAKS #oth 21.412532.221122.11151424.5544343526242112121215223235434111 hla0779 G::R::L:::TD:::E::::T:E:K:SI-D:E:T:SAA:::T:R:T:GAGGRTID:I::: hla1277 VD::::::D:::I:::::::::::::-L:KT:SS:Q:D:::::::::::::::::::::: HVO_2813 ::::A:ET:::E:S::::::V:S:::NESPIID::::::::::::::N:::::Q:T:::: Hbo2551 :::T:EQS:::D::::::::E:RSK::VNPSPD::I:::::::::::S::::::::Y::: Hmu1791 :::S:A::D:::::ER:TTPARCAR::R:R:::ESR:----------------------- NP4274A :::D::AE::AE:S::::::::::M:P:R::E:VDP:V:::T:::::M::::QETVT::: rrnAC1089 :::S::HET::::SDR::::K:::T:K::::KAQ:NVVV:::::::::::Q:TKSV:::: consensus DTGATRTSIDTSLAAEIGAGPIKSMTRVKSGSLKSGKARPVVDLVIGIGGTQHTVTASVE #oth 11112111113521121121113332321111321232.121232222224221121121 hla0779 ::::R:::::LDV::D::::::VGTVH:::::QTGRQK::L:EIDVK::DRWQ:::::I: hla1277 :::::::::::Q::::::::::::::::::::M:G:::::::::::::::N::::::::: HVO_2813 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2551 ::::::::::::::::::::::::::::::::M:::::::::::::::A::::::::::: Hmu1791 ---------------------------------S:ATS:R-------------------- NP4274A ::::::::::AR:::D::T::::DIVKI:::::::::S:::::V:V::::K::::S:::: rrnAC1089 ::::::::::AK::::::T:::LDIVKI::::::::RS:::::::V:V:::::::::::: consensus DRSHMDYPLLLGRDILEHYRVDVRRRAD-DE------EEE--EE #oth 21311212211111114213111221431334334332223311 hla0779 N:N::A::I:::::::DG:::::TK:QR:G:::::::---::-- hla1277 ::G::::L--------------------:--::::::---::-- HVO_2813 :::::::::::::::::::::::::::NA:RNDSDDE:::LL:: Hbo2551 ::::::::::::::::Q:::::::::V::EGGKETDS:::YL:: Hmu1791 ----------------------------:--::::::---::-- NP4274A :::::::::::::::::::H::::K:I:::GERSAPDGTTLE:: rrnAC1089 ::G:::::::::::::K::Q:::T:::::::SDVETE:::QS::