6 genomes BUD1499 6 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC3227 HVO_A0155 Hbo3748 Hmu2650 - hla1941 NP5134A -

Pairwise sequence scores
Consensus score	1101	HVO_A0155	Hbo3748	Hmu2650	rrnAC3227	hla1941	NP5134A
836	HVO_A0155	1102	879	563	620	642	596
814	Hbo3748	879	1119	519	631	604	586
706	Hmu2650	563	519	1190	602	621	597
787	rrnAC3227	620	631	602	1091	645	632
796	hla1941	642	604	621	645	1118	689
804	NP5134A	596	586	597	632	689	1248

165 symbols
consensus       ---------MSRETTASEI----DDHEAQTDGGTAA----RHDEIDYLDREVNLLKPSTP
#oth            2222222222133243334222223324321122141122323221..32.1.113.1..
HVO_A0155       :::::::::::::S:E::::::::S:D:S::RS::P::::::::::::S:::::::::::
Hbo3748         :::::::::::N:::E::::::::S::T:AGRD:::::::::EQ::::N:::::::::::
Hmu2650         VYIMKNGDAG:DR:VD:SADESTT:S:PRP:::V:T::::-G::VA:::A:::IFS::::
rrnAC3227       ::::::::::::D:P:DRE::::-ESTI:P::::::::::A::D:::::::::::R::::
hla1941         ::::::::::TDNNSRNSD::::---D:V::::V:SGAAQK:RQT:::GA:::I:N::::
NP5134A         MADKHMHEND:H::E:ADTGDTP::G:LV::::MSD::VE:EK::::::V:I:::::A::

consensus       FMRDHLRIIWSGFIAWALLTFGPVTLTRLAPELMTTQLPVIGFPLHYFLVAIGAPTSALI
#oth            1.....111.31.33.3.411..121.321.33..313.221..1....12213.221.2
HVO_A0155       ::::::KV::T::::::::::::PV::YF::AT::V:::::::::::::::VLS:::S:V
Hbo3748         ::::::KVV:VS::T::::::::PV::YF:::::::::::::::A::::::VLT:::S:V
Hmu2650         :::::::::::::V::L:IV::::S::PII:GV::API::::::::::::G::::VG::L
rrnAC3227       ::::::K::::S:VL:::VV:::::::A::::M::V:T:LF:::::::::SF::::G:::
hla1941         Y:::::::V:T::AI:V:AVW::::::::::DV::::M:ILA:::::::::F::::::::
NP5134A         :::::::V::L::GI:I:T::::::A:::::::::S:M:L:::::::::I:::G:SA:::

consensus       LAFWYSRKRDQLDEKYGIDH-TVTEPETGS----EAAAADGGVDE
#oth            .122.2.1..21.12...223142322243222312.11...341
HVO_A0155       :::I::::::::::R:::::::ASQTRSK:E::S:::V::::RV:
Hbo3748         :::I::::::::::::::::::T:TED:S:EKGG:T:VT:::SI:
Hmu2650         :SI::A::::A:::E:::S:E:EP::::E-::::V:::::::TA:
rrnAC3227       ::VV:T:Y::R::Q:::::SVES:A::::-::::::::T::::EQ
hla1941         ::::::::::A:::::::::A::::T:S:A:::::V:::::::::
NP5134A         :SV::A:::::I::::::EQ:::S:::PAETVAE::::T::::::