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[R] (-) COG3269 Predicted RNA-binding protein, contains TRAM domain
6 genomes BUD1513 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1050

rrnAC1473

- -

Hmu1561

Hut2345

hla0777

NP2242A

-

Pairwise sequence scores
Consensus score849 NP2242A VNG1050 hla0777 Hut2345 rrnAC1473 Hmu1561
336NP2242A 935 245 243 255 274 293
590VNG1050 245 871 461 462 530 497
645hla0777 243 461 865 533 528 556
612Hut2345 255 462 533 853 571 504
662rrnAC1473 274 530 528 571 843 555
653Hmu1561 293 497 556 504 555 925

136 symbols
consensus       MNELP------LAIGGAAVLVLLVVAIALR--RRSSSSARASKR----AHRAAQQREP--
#oth            13522112232322111223333223333311.233143321111111..22..3.3.11
NP2242A         -----::MVQS:V:::VVA::VF:MLLG:F:::::RTPKT:AQKKRDA:::E::::P:EE
VNG1050         ::TI-::::::MIGA:::::C::A:GVVW::::::G:::GQ:Q::::::::D::::T:::
hla0777         --M:::::SSPVV::A:::IA:::LL::V:RL:AP::E::E:::::::::D:::K:::::
Hut2345         :D:IW::::::FIA::VGLVLAI::VLW:A:::SADTA--::::::::::D:::G:::::
rrnAC1473       :EP:W::::::::A::::LA:G:AL:F:IT::::::::--::::::::::E:::E:::::
Hmu1561         ::S::VDGVAP:::::::::::AF:::WW:::::G::DR:Q::K::::::E:::::D:::

consensus       PVELGETYEFGVTEFTDHHSGDRVAVGKVEGFVLFTEDIPA-----DVSEGDVIRAKVLS
#oth            1122.11..111212121111333111111.112.23.1.31111132.31.2.213111
NP2242A         AA:K:K:::LV:K:-:QYDRVPPEVR:TIN:LQT:VR:::DPGGSGAL:V::T::VQ:TD
VNG1050         ::S:::::::::::::::::::::::A::::::V::T:V:::::::G::P::::Q:TIT:
hla0777         ::AI::::::::::L::::::KE:::::::::::::Q:::R::::::I::S:::::::::
Hut2345         ::::::V:::::V::::::::E:I:::::::::::A::V:::::::::::::::::R:::
rrnAC1473       :::::::::::I:::S::::::::::::::::::::::V:S:::::S::A::::::T:::
Hmu1561         :::I:::::::I:D:SE::::ETN:::::::::::V::::D:::::GL::::I:E:::::

consensus       FNEGRTSADARFVGRA
#oth            11212.1.1.2.2213
NP2242A         YGSN::T:Q:::I:::
VNG1050         ::RNE:::::I:A::P
hla0777         ::::::::::T::TK:
Hut2345         ::::::::::T:::KN
rrnAC1473       ::R:H::::::::E::
Hmu1561         :::::::::::::E:R