6 genomes BUD1516 8 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - pNG5047 rrnAC0416 rrnAC1471 HVO_1408 - Hmu1611 Hut0473 hla1838 NP2808A -

Pairwise sequence scores
Consensus score	1022	HVO_1408	rrnAC1471	pNG5047	Hut0473	rrnAC0416	NP2808A	Hmu1611	hla1838
698	HVO_1408	1062	542	574	547	590	585	573	648
670	rrnAC1471	542	996	604	662	542	514	552	560
651	pNG5047	574	604	994	699	519	525	510	545
688	Hut0473	547	662	699	1019	549	503	541	627
748	rrnAC0416	590	542	519	549	1026	558	621	637
700	NP2808A	585	514	525	503	558	1019	587	659
742	Hmu1611	573	552	510	541	621	587	1089	679
815	hla1838	648	560	545	627	637	659	679	1105

149 symbols
consensus       ----------MFASAGAGELFLLGRLLFGGVLAFMGLNHFLNTDQMAGYAEFKGLPAPRA
#oth            111223333342423432221121.2...31...1.21..43435.22..13....1.32
HVO_1408        :::::MSVALQ:::P::DIA:::A:V:::A::::::::::::L:H:T::::M:::::::L
rrnAC1471       ::::::::::-M:PELNVV:LVA::V::::::::T::S::TQ:E:::::::Y:::::::F
pNG5047         :::::::::::AITGAE:VAL:I::I::::::::T:::::FE:EE:T::::Y::::::K:
Hut0473         :::::::::::AFTGTE:IVL:A::I:::I::::::::::MQRE::T::::Y::::::GF
rrnAC0416       :::::::::MA:E:::::::::::::::::::::::::::Q:AG:::P:::A::::::V:
NP2808A         ::::::::::::E::::DIV:V:A:V:::AT:::T:V::::D::G::E::::::::F:::
Hmu1611         :::MIPLQSEL:::::S::::::A::::::::::::M:::T::AD:V:::Q:::::::KL
hla1838         MSAELTTIPLQ:D:PF:::::::::::::VT:::::::::MDV:T::::::::::::::F

consensus       SVLASGGLLILGGLGVAAGVFPVLAAGALAGFLLVSAVTMHDFWAVPD-EERQDEMTSFL
#oth            1.33..32.232.22142.13.122122214..2312241.1..2222112313.113..
HVO_1408        G:VV:::M:VF::::I:L::::A:::::V:V::I:GTPVF:::::::E:DQ:ES:::G::
rrnAC1471       ::::::::::::::::TV:::::V::V:::V::I::::A:::::::::::D::::LN:::
pNG5047         G::L::V::::::::II:::L:AVS:VVI::::I:::LIF::::::SE:::Q:T:::Q::
Hut0473         ::I:::IV::A::V::L:::Y::VG:V:::::::I::::::::::::E::DQ:::::A::
rrnAC0416       ::YG:::::LVS:VL:IL:AY::I::::::T::VA:::M::N:::::::DQM:::::Q::
NP2808A         :::L:::::VF:::S:V:::V:AIG::G::L:::A:::::::::NMDG:::A:N::NA::
Hmu1611         ::VG:::::LFA:A:I:V:A::::SGF::GL:::L:G:A:::::SMD:P::::N::::::
hla1838         ::I:::LV:V:::::::::A::::::::::A:::I:::::::::SID:P::::S::::::

consensus       KNVAGAGGALVFLAVGGTSWPYSVGIGLF
#oth            ..3421.1.1232.42342.212211322
HVO_1408        ::LVML::::::::LS::T:S:AI:LT::
rrnAC1471       :::TL::::::VA:SATGT:AL::::SPL
pNG5047         ::I:L::::::IV:I:PQ::A::L::TVL
Hut0473         ::FVM::::::VA:A:TQ::A::::::::
rrnAC0416       ::I:L:::::SL:::A::::::T::LS::
NP2808A         :::F::::::A::::A:ST:::ALN:::V
Hmu1611         ::LF:::::FA:A:L:AIA::::::LA::
hla1838         :::Y:::A::AL::::::A:::AL:L:::