Home |  Text search
6 genomes BUD1519 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3264

-

Hbo1766

Hmu2465

Hut1718

hla1196

NP3046A

-

Pairwise sequence scores
Consensus score1640 Hmu2465 rrnAC3264 hla1196 NP3046A Hbo1766 Hut1718
933Hmu2465 1686 659 590 618 690 766
981rrnAC3264 659 1738 586 610 702 810
997hla1196 590 586 2017 965 780 685
1008NP3046A 618 610 965 1801 801 700
1098Hbo1766 690 702 780 801 1684 805
1064Hut1718 766 810 685 700 805 1626

292 symbols
consensus       -------------------------MDAAF----------------------EAALRAGG
#oth            1111111111111112211122221133433222211111111111112121413.5321
Hmu2465         :::::::::::::::::::::::::::TDV::::::::::::::::::::::AVS:T:D:
rrnAC3264       ::::::::::::::::::::::::::::TADV:::::::::::::::::::::VQ:EQ:D
hla1196         VATRDRLRRRRSRRVRSGRENANTPRAD::GMDERADGSAADGSTAAGTGRGR:::IE:D
NP3046A         :::::::::::::::MTG:EHSTAPRGYPPLMNRT:::::::::::::NGQG::::V:E:
Hbo1766         ::::::::::::::::::::::::::ED::::::::::::::::::::::::D:H:D:D:
Hut1718         ::::::::::::::::::::::::::::G:::::::::::::::::::::::S:H::I::

consensus       VEFDARDAALLRAIAEHGSLNAAAEALGRSRARALARIEELEDAFGPLVERRRGGSGGGG
#oth            132122.12..2214331.122.133....111225.234..312.3..1.2...21...
Hmu2465         :TV::S:::::::VDSE:::::::T:::::YS::HK:LTV::ETL:S::::E:::E::::
rrnAC3264       :ALT:::RT::Q:V:A::::::::D:::::Y:H:QR::V::::::::::D:S::::::::
hla1196         A:::G::::::::VH:A::VAG::SE:::::::::L:::A::G:::T:::::::::::::
NP3046A         :::::D::T:::E:N:T::VAR:SSN:::::::Q:S:::T::S:::D:::::::::::::
Hbo1766         :S::RS::R::AT:::T::VSG:::S:::::::C:::LR:::::L:::::::::::D:::
Hut1718         :T::GD::::::::ED:R::::::::::::YS::HQ:VTD::S:V::::::::::AD:::

consensus       SELTDAARDLLARFDRLQAALSGTATVPETVLSGTVRERDGELATVETPAGTVRALV---
#oth            .2..331231.4112.111324111422121.3.1.3413.1.2321143.221123211
Hmu2465         :V:::RG:E::TQ:A:VHTVV::::AADVIA::::::::S:R:V:A:S:::ELH:I:VGG
rrnAC3264       :::::::EQ:::::Q::::DFD:V::AE::::R:::VD:::::::::::P:::::I::::
hla1196         :R::G:G::::D:Y:::::V:AA::N::::::D:::ARV:::::E:D:AV::::G:-:::
NP3046A         :R::EN:GA::R:Y::::T::TA:D:::::::N:::TAVL::::D:::EI::::G:-:::
Hbo1766         ::::A::::V:G:::::::T:::::G::::::::I:THVE:::CS:::D:::I::VAT::
Hut1718         :::::D::::::::A::::::E:::RTE:V:::::::::::::::I::G::M::::L:::

consensus       --DPDATVGDAVQVRIRADAVTLQDPSDAPAADATSARNRLRGTVTAVDRGDAVATVSVA
#oth            11343234221.2.432..11.134124325334.....123.1.241331331231313
Hmu2465         DR::SVDT::D:T:TLT:::::::E:DATLS:TR:::::::::::::::ER:G:::IT:D
rrnAC3264       :::TE:CP::::E:G::::T:::NA::E::ESTG:::::QFA:::ERI:E:TSI:L:AL:
hla1196         ::HD::A:::::::::G:::::IYKE:QRVDP:S:::::::::E:VEIVA:KT:S::R:E
NP3046A         ::H::V:A::D:::::G:::::::::A:S:GP::::::::YQ::::::EH:ET:LE:T::
Hbo1766         ::ESVR::EK::T:SV:::::::H::::T::ES::::::::S:::EG:K::::::::::N
Hut1718         ::FE:::---D:E:LF:::TI::HR:DT::P:AD::::::F:::::D:E::E:I:H::::

consensus       VG-ETPLRALVTAESVARLDLDAGDPVVATFKATATRAVSRA-E--------
#oth            .2441222121.32.432.3132.4311221..1.11324424333221111
Hmu2465         ::AA::IPV::::A:R:::::EP::::::::::::A:VTRLSE:::::::::
rrnAC3264       :DPT:T:S::::DT:LDK::ITT:AEL::S::::::AG:IP:LDRSLSDESS
hla1196         ::::VVF:V:I::::S:::::::::D:AIRW::::::V::QSAASGRE::::
NP3046A         :S:DV:F:::::D::AD::G::::C:::L:W::::::LAL:-:-::::::::
Hbo1766         ::LS:::::F::V:::R::S:EP:TS:::SW:::::::T:T:V:PQ::::::
Hut1718         :SE:VT::VV::LA::EH:E:A::SS:::::::A:::::P:-:-::::::::