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6 genomes BUD1532 7 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1024

HVO_2169

Hbo2934

Hmu0558

Hut1781

Hut2872

- -

HQ3482A

Pairwise sequence scores
Consensus score2198 HQ3482A Hut1781 Hbo2934 HVO_2169 rrnAC1024 Hut2872 Hmu0558
1044HQ3482A 2523 586 686 624 654 559 708
1154Hut1781 586 2123 663 753 774 691 815
1242Hbo2934 686 663 2240 772 714 661 839
1229HVO_2169 624 753 772 2575 749 685 894
1205rrnAC1024 654 774 714 749 2363 749 968
1091Hut2872 559 691 661 685 749 2087 848
1370Hmu0558 708 815 839 894 968 848 2288

374 symbols
consensus       MSTD---------------------TEADADVDDSDPDDDGSP-DRRTLRAELEVLREEN
#oth            1143431122222222222111111356443223534543353235632211133.13..
HQ3482A         :::SNTDREQASSESEDEL::::::LDERT::S:D:ETVQ:EI:SKNV::GRIDE:EA::
Hut1781         ::M:::::::::::::::::::::::L:::TASNRGAEEQEID:AGVVGE:::A:::T::
Hbo2934         ::--:::::::::::::::::::::SVTET::::ES:LH:E::A::E:::GRI:::::::
HVO_2169        ::A:DPDRLDEGLANGETHAVVSAA::R:G:AGRTGTG:T:D:::ADAD::::AG::R::
rrnAC1024       ::QPEP:::::::::::::::::::SQL::ST::::QQT:VV::::Q::E:::G::::::
Hut2872         ----:::::::::::::::::::::------:SEAST:T::PAQ:D:::A::::::::::
Hmu0558         ::::HA:::::::::::::::::::::HQQTT:E:T:::EL:::---E:A:R::T::A::

consensus       RRLREEYARARRAQYRRTAVGLAAVGLLGLGGGVVFPALRTVLLALGGTGLFAAILTYYL
#oth            31..541432124312111322332.3323311322.431221322111.2.21311312
HQ3482A         SQ::AA::ATK:QR:Q::::::FII:I::V:A::GL:GTQS::F:I:A:::::G::::::
Hut1781         E:::DQFRQ:K:TT::::M:AFLV::::SF::ALL::DV::::VT::::::::::::WFI
Hbo2934         :::::::L:::Q:::::::I:M::I::CA:A:AA:L:::::T::V:A:::G:G:S:L:::
HVO_2169        V:::QR:EAL:EG:::::::A:T:L:VA::L::AL::PV:ET:VV::AI:::::AV:R::
rrnAC1024       :::::S::H:K::TF::::L:FF:::G:S:IAAF:::::Q:IFI:F::::V::G:V:F::
Hut2872         ::::R::S:::Q:E:TQM:AI::GL:VV:FL::::Y:SAQ:::F:F::::V:L:S:L:F:
Hmu0558         E:::SS:::::QS:::Q::I:F:::::VATI::::::ST::I::::::::V:::V::WFV

consensus       TPERFVSASVGAQVFDAHARNEAALVDELGLQDTRVYVP-----TARDA--VRLFVPQHR
#oth            1.12122131144125123544354252.1.23322...22225343243331111.244
HQ3482A         :::Q:IA:D::G:IAQ::TETL:GFIQT:::SG:I::::TSMTA:G::T::-IM::::ID
Hut1781         :::T:HA:::SE:I:::T:N:G::M:E:::::E::L:::::::VGE:::::-::Y::A::
Hbo2934         ::DQL:PV:::QS::T::D:HASS::::::::::T::::RVRDQE:VSPEQI:::I::A:
HVO_2169        S::::I:VG:::S::G:::G:H::V::::::::AT::::::::DAD::S::::::::E::
rrnAC1024       :::::::::::DT:::TL:DV:QH::S::E::TET::::::::TASHPEMAA:::::::V
Hut2872         ::::::P:TL::DIYATLSQS::EI:AG:::T:::::::::::::DD:S:::::::::RA
Hmu0558         :::::::::::DA:YE:L:::HER:CR::::T:R:I::::::::::DP:TG:::::::QT

consensus       PYEIPDEDALAALFVVTDDEAERGISLPPTGGGLYTEFERALSGTLADDPEEIAEQLADA
#oth            5232.234414431.31334331.132511.44.2511234332443441344241242.
HQ3482A         :::::P:--::PGV:SPTSSR::::GIV:::R::::::N::V::QMPTE:V:RS:::SE:
Hut1781         N:T::::Q::NS:::::G:QR:::V::H::::S::A:::TV--T:A:NN::QFSA:::::
Hbo2934         GW:L:SD:::::T::EP:::MR:::::E:::VS:LS::-ADAAN:NPSE:ADL:D::CE:
HVO_2169        A:AL::AE::RDT:::::::LA::VAFD:S::::FD::::S:D:P:G::::TL:R:AT::
rrnAC1024       E:AV::PEQ:GE:::-:GV:::Q::::::::VR:::::::T:::E:D:::DA::T::TA:
Hut2872         D:RL:::THRGDP::::EEP:::::TF:A::DP::ETY-TDV:T:GGAGI:TTV:R::::
Hmu0558         :F::::A:D:S:::::::EA:T::VA:R:::ET:FG:::S::::S:::T:D:::T:VRA:

consensus       IVEQFELADAVEADV-------------------DAADGRASVRVTDSAFGDLTAFDHPI
#oth            23.1.112352232311111111111111111114614222234234242243523.2.2
HQ3482A         :T::::::TN:::::ATYKTEGMGTETDPEIDDTQSERR:LT:S::EP::TTA::I::::
Hut1781         :::::G::RS::TT::::::::::::::::::::IP::NE:RFEI:G:TC:TVQ:::Q::
Hbo2934         V::::::STYAD:E:::::::::::::::::::::T:TN:V:::AGH::Y:E:::::::L
HVO_2169        L::L::::G:AT:ET:::::::::::::::::::::::::LT:::E:CR:AAAET::T:V
rrnAC1024       LS:::::V:DTTIEI:::::::::::::::::::GGENRT::IAIDNP::::IHRL:::V
Hut2872         LL:::::V:T::T:::::::::::::::::::::--:E::::LG::G:LY:R:DRV:::V
Hmu0558         ::::::I:::::L:L::::::::::::::::::::R::::LT:S:D::VY:::GR:::::

consensus       VSFLAVGLARGLDRPVRVEVADEED--DEYLVTCRWEAIES-STQTE-------------
#oth            1.3411231222331133345553323443432331455545443444343423223233
HQ3482A         A::T:TVI:E::SQ::ECNIDQ:L:TG:T:QF:LS::YR::DTN:D:NDIFE::::::::
Hut1781         :::::T::::HVGE::::::P:AD:::--GI:R:V:GE:A-:-----:::::::::::::
Hbo2934         ::VIG:::::::GAS:ET:SVESV::S::::ISY:YRT:D:A::KQG:::::::::::::
HVO_2169        A:LV::VV:::::A::VT:::AG:E::MDFA::::::VGGDEE:E::TEPSADAADGTTE
rrnAC1024       ::L::::F:T::::::T:DTR:D:R::FSGV::VS:D:L:QP:A:SSGTATPEQATTTIP
Hut2872         :::::::IV:DR::::T:A:ETPDNDRV::::::T:P:E--:-----:::::::::::::
Hmu0558         ::IA::A:::::E::I:A:L:G::N::---VA:L:::PAQAGDDE:AVDETSDSETDDDG

consensus       --------------
#oth            22211111111111
HQ3482A         ::::::::::::::
Hut1781         ::::::::::::::
Hbo2934         ::::::::::::::
HVO_2169        TRRETENADPDERR
rrnAC1024       ETS:::::::::::
Hut2872         ::::::::::::::
Hmu0558         E:::::::::::::