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6 genomes BUD1534 7 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1026

HVO_2167

Hbo2936

Hmu0556

Hut1784

Hut2874

- -

HQ3473A

Pairwise sequence scores
Consensus score2600 HQ3473A Hut2874 Hut1784 Hbo2936 HVO_2167 rrnAC1026 Hmu0556
972HQ3473A 2741 544 592 578 518 534 656
1279Hut2874 544 2820 717 785 711 842 835
1339Hut1784 592 717 2660 893 881 947 964
1362Hbo2936 578 785 893 2597 841 947 911
1361HVO_2167 518 711 881 841 2231 911 928
1519rrnAC1026 534 842 947 947 911 2733 1201
1568Hmu0556 656 835 964 911 928 1201 2705

426 symbols
consensus       --------MRDL------RAVTYPRILLAALAVAVVIGLGVAASTSAAAFGAYNSAWDGA
#oth            111111113434311111353531344124433445323231231.2432131.53.2.4
HQ3473A         :::::::::S:TDTDDETI:ISL:Q:I:II:C:SFI:SA:I:GVS::RPL:I::TD:S:S
Hut2874         :::::::::NWRT:::::VL:WG::FT:VVVLLGAN:::V::M:::::PYSV::QG:::V
Hut1784         :::::::::::::::::::D::V:EAV:V:ITI::AGAILFG:A:::T::::F:YG:::T
Hbo2936         :::::::::A:-:::::::IGQ:A::AVIG:::V::LS::IG:A::S:S:S::::::N::
HVO_2167        ::::::::V:LGS::::::E:G::HL:V:::L::MLV:V::G:G::SSTY::F:A::::G
rrnAC1026       MVSEPSPDDSW:::::::PSL:L:QL:::TYTALT::A:VY:::::S::::::::Q::::
Hmu0556         ::::::::----::::::V::D:::VV::GF::V:TL::L::G:::GG:::S::P::::T

consensus       SDLRSVAADAGADTSVG-NTSEYDTADAE--GTVAFVLSPAEAYSAAERARIRAFVRAGG
#oth            2221331323344442452335225544523332221131533126323313331124..
HQ3473A         ::F::I:GEDERKVIL-:----RPSTEMTLTEQTV:IIFGVSQQ:MNT:QSA::VL:N::
Hut2874         :::::QIEAE:V:::IALD:AP:EDRS:K::DA:S:::A:IS::E::DT::LNR:LAN::
Hut1784         A:::T::GET-T:SA:LE:A:A::RLAGN::::L:V::G:S:P:TP::LE::ET:L:G::
Hbo2936         A:VQP::SET::TF::-:-AT:LE::YR:PNN::SII:::DQ::TR::AQ:V:E::EQ::
HVO_2167        :GV:G:::::::E:E:VY::T:::AV:PAPA:S::::I::ERG:TD::A:::E:::::::
rrnAC1026       GE::T:::::::NVT::T:V:Q:P:S::D::::::V::::::P::SS:::::AE:::S::
Hmu0556         :EF::L:::DAEEL:I:Q:::V::P::::::::L:VI:::::Q::ER::RS::R::E:::

consensus       TVVVADDFGPHANRLLASIGADARIDGRPLRDERNYYRSPALPVATPV------------
#oth            .11123232342.41.3331132.3132311.3242333221132253111111111111
HQ3473A         :::IL:GVSV::::F:K:T:::::VGD:::::LES:::::S::IINSR::::::::::::
Hut2874         :::::AEN:SR::P:::::D::::LGP:V::::QSN:::S::::VV:ATIDDNATDDVRT
Hut1784         :LL:GG:::AG::E:::G:D:T::::::L:::::::G::::F:L::N:::::::::::::
Hbo2936         :::::::::::T:P::SALDS:V:::::L::::QQ:ATT:NFSE::TT::::::::::::
HVO_2167        ::::::::R::G:D:::RL::S::::RT::::D:HQ:K:G::::::R:::::::::::::
rrnAC1026       :L:::E:YR:EG:S:::AV:::::F::::VY:N:::::NSS::E:::A::::::::::::
Hmu0556         :LL::E:V::NG::::R:V::QT:F::AS:::::R:ENG:::::::A:::::::::::::

consensus       AA-LLTRGVDTLTLNHGAAVRAN------------------NATVLARSSNYAYLDRNRN
#oth            44545243233331.12222433111111111111111221321122411331.2.5121
HQ3473A         NMM:QN:SI:EF:V::A:SIKR:::::::::::::::::::G:::I:T:::IS:V:Q:::
Hut2874         ::GR:LD::ERV::::A:T:EP:::::::::::::::::::A:QP:LSTRAT::::A:G:
Hut1784         --:NG:V:::E:A::YPS::VTP:::::::::::::::NGT::::M:ST:P:::A:E:::
Hbo2936         PNATFLNTDQ:::::::S:L:::::::::::::::::::::GT:::::::EFS:V:S:::
HVO_2167        ::DP:::N:TQ:S:::P:T:T::::::::::::::::::::ES:::V::::FS::::DDD
rrnAC1026       GDYPE:A::::VV::Y:TT:::G:::::::::::::::::::::P:VNT:E:::::T:G:
Hmu0556         G-::DNDS:E:IV::::T::::AGTTDTGAPNETMRAVRAT::::::A::P:::::::G:

consensus       GELDDDETLASRPVATRESVGAGTVIVVSDPSVFINAMLERGDNRAFARALLADHDRVVL
#oth            431.22.33423113.4.3113.313321.1.2.2.2..1.31.1212431243432133
HQ3473A         D:V:ES:SIE:QI:M:::P:AN:S:MLL::A:::T:T::D:EG:QKL:::::DPY:Q:II
Hut2874         :T:::::::GR:::::V::::::::::SG:A:M:T::::::T::Q:LVSGIVD:SG:AI:
Hut1784         :::::A:SMRAY:IL::::::N:::LTL::::::::S::D::::::::QT:FG:AQ::RF
Hbo2936         YQ:::S:A:G:::I::Q::::D::IV::::::M::::::::EG::::VTG::ES:::::A
HVO_2167        :::::::::Q:H::V:::RL:::D:V:::::::::::::D:P::::::T::VS:RAT:::
rrnAC1026       AN::GA:Q::::::V:S:L::D:R::A:::::L:V::::::::::R:V:N:V::::TAL:
Hmu0556         E:::::::V:RY::::A:R::E:R::A::::::::::::::::::::SH::::GS:T:::

consensus       DYSHAESIPPLAAAVLALRRSPLLQLLFG---LALVGGL--------LFAPRYLD-AIRA
#oth            13223342.224542232142433144311113323.23222222224565354324342
HQ3473A         GGYNTSIL:TISTVI:L::::VGY:----:::AIAL:::FISAISLHSLLLY:N:TEMT:
Hut2874         :::QGR:L:VVPLI::S::QT::::VVV::::::VF::FSMWYQFPR::::AFWRERLF:
Hut1784         ::T:SGG::::VRLLKLI:SG::T:F::::::TL::::I::::::::VVMA::GR::::N
Hbo2936         ::::T:Q:::::GF::W:Q:T:IA:VG::AIA:I:::VI::::::::V:R::Q:V:GVFD
HVO_2167        :F::::ER:::QV:LR:::D:GA:::::::::VVAA:AV::::::::--------::LV:
rrnAC1026       :::::S::::V::::::VQ::DA:L:FC::::VV:::A::::::::::AYD:R::EP::D
Hmu0556         :V:::G:L:::Q:L::S::G:A:::AVV::::T::L:V:::::::::AGHVAL::::VS:

consensus       RKRRRDGDAPD-PPLDA--------AAIVALLSDRHPDWDAERVQRVTKAIMRRRAQRRG
#oth            343164444342453441111111144445445521131264336134444363365555
HQ3473A         G:SED::G:SVERM:ASGNDTDALISGR:S:ML::::S::K::I::LI:SS:D:DG:IAS
Hut2874         SVG:G:R:R:R:ID:::::::::::EDLD:FIR:::::::D:Q:S::::::I:::R::::
Hut1784         :FS::APA:E::VA:TE:::::::::E::D:V:KQ:::::HD::T:IATQLAT::SGD:D
Hbo2936         ::TEST-----:-:V::::::::::D:LR:Y:ASQ:::::ETELG::MTGV:PEETNLSE
HVO_2167        :QG:LS-----:-----::::::::-----------------------------------
rrnAC1026       :F:EYS:RE::::H:SR::::::::DGVEKY::G:::::ESAQ:K:::E:VIKQ:PD:QR
Hmu0556         LR::FGS:D:AR::R:R::::::::::::RGVTA:::E::::::E:::Q:::E:::EGD:

consensus       ND----
#oth            442112
HQ3473A         ERDDDE
Hut2874         :E::::
Hut1784         TSSDDS
Hbo2936         D:::::
HVO_2167        --::::
rrnAC1026       ::::::
Hmu0556         ::::::