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6 genomes BUD1539 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3140

HVO_1477

Hbo0072

Hmu2611

Hut2367

- -

HQ3375A

Pairwise sequence scores
Consensus score2355 HQ3375A Hmu2611 Hut2367 rrnAC3140 HVO_1477 Hbo0072
1219HQ3375A 2526 822 534 916 932 914
1383Hmu2611 822 2304 533 1014 936 994
838Hut2367 534 533 1510 658 683 652
1593rrnAC3140 916 1014 658 2407 1132 1172
1637HVO_1477 932 936 683 1132 2444 1326
1579Hbo0072 914 994 652 1172 1326 2401

339 symbols
consensus       ----RRRGVALVIVALVVLAGCLG-----A-AGSPSTPAATGADTTAASGPP-T------
#oth            11233144452332312232..32332323122333433343543442343343432122
HQ3375A         MNVSQ::I:M:G:AL:::FS::AEVNDSI::PTESPASSVN:SF:ET::T:EFNLSAASG
Hmu2611         ::MD:::SLLVAL:::AA:::::-:::::-:S:G:Q::::P:DAVP:G:DT-:-::::::
Hut2367         ::::------V:::IV:L::::G:LPGVGTD::TA:::TGA:TQ::D:PQV:S:GDR:::
rrnAC3140       ::::M:W::FG:V:V:::AT::S::::::F::::::QS:G:AV:SQP:VNV:EST:::::
HVO_1477        ::MV::ATAT::V:V:A:::::::GGGAG:::TTVEST:TET:SP::Q::S:T:AAAAGD
Hbo0072         ::::M:T:I::LSI::L:TS:::::::::F::P:V:DAG::PQ:VSNQD::S:-::::::

consensus       VTVTVTEVVDGDTIKIAYENGTRDTVRLLGVDTPEVH-AENTPDEFEGVPDTEAGRACLR
#oth            2211.12.1....2415141.231....1.1.1..2312323.2.121..2121.131.2
HQ3375A         TR:::V::I:::::N:Q:::::VE:::::::::::TAVTQT::::WQS::TSAD::DW:A
Hmu2611         :NA:::R::::::VE:R:DD::F:::::::I::::TR:GGTN:A::::::::A::::::E
Hut2367         W::::V:::::::MD:E:A::::E::::::::A::PY:::VS:G::D:::::::::TW::
rrnAC3140       ::::::A:::::::QV::::::S:::::V:::::::::T::D:A::::::E:DD:AS:::
HVO_1477        :::E:V:::::::::VVMPD:A:E::::::::::::::::::::::::::E:::::T:::
Hbo0072         :R:::::::::::M:VK:T::S::::::::::::::Y:GS:::::::::::::::A:::E

consensus       GAGENASAYAKARLAGETVVLAFDERADRRGYYDRLLAYVVVD---GTSFNYRLIETGHA
#oth            42122.13323411322214233.15221.11.1...2111211112441122.214.1.
HQ3375A         SW:TQ::::TTD:::N:EI:II::PVS:::::::::::::YYSPSAT::::M::L:N:Y:
Hmu2611         R:AG::TRALE:LVG::P::V:V:PQ::::DR::::::HL:::::::VDA:E::V:R:::
Hut2367         :W:::::TF:QR:::::::RIVT::::::::::G:::V:::::::::EV:GEQ:L:D:Y:
rrnAC3140       :T:T:::SL::Q::L::::G::::PNLN:::::::::::::N::::E:L:::::V:::::
HVO_1477        A:::D::::::S:::DR::E:RY::K:GE::::G:::::::::::::AE:::D::TE:::
Hbo0072         T:::::::::::::S:QE:S:V:::T:::::::G:::G::Y::::::Q::::D:::::::

consensus       RVYDSEFERRERFYAAERAARDAGRGLWSCADP--G--T--ADATTDGGHGIEIV--HAD
#oth            .2.113.324221442143.14332.1.31333113443443233434454342332131
HQ3375A         :H:E:::S:TKEYKKTAQQ:::TAT:V:-----:::DNVSSPEQ:STVS:P:D:LTV:E:
Hmu2611         :::::A:S:SD:::EH::::::::::V:A:V::::-::-::--::PT::V:LRV:::-::
Hut2367         :L:ET::QLYD::A:::SR:QA:D::V:-----::-::-::--------------::---
rrnAC3140       :::::::::A:L:::::D:::SDR::::R:T::GEVIR:AI::GG:ESAS:V::AEI:::
HVO_1477        :L:E:S::E:::YER:::D::ER:V::::::TE:::AAAGG::::::D:LSLS::::-::
Hbo0072         :::::T:TE:::YQT::KD::T:::::::::ES:ESGG:MTS:GDN::NTT::::RV:P:

consensus       APGNDNENLNDEYVTLRNTGDAAIDLSGWTVSDAAGNRYTFPPGTTLDPNASLTLYTGSG
#oth            141223212231113341414452323112221322351312424334333332132131
HQ3375A         :S::EYD::D::::LFK:::TSR:Q:N:::I::K:::M:S::::VIIN:GE:M:::::N:
Hmu2611         :::D:R::P:G:::VVS:S:GDPLAIGN:::T:E::H:::::::A:VPA:G:VR::S:::
Hut2367         ---------------------------:FASAPS--------------------------
rrnAC3140       :A::::::::::::::T:::::TL::::::::::V:HQ:M:-TNL:::S:GLV:::::::
HVO_1477        ::::::D:::E:::::::D:::::::::::::::::AT:::AG::E:::G:::::H::::
Hbo0072         :D::::::P:G:::VF::E:EQV::::::S:A:::D:E::::S::::E:D:E:::KS:T:

consensus       TDTDTEVYWGRNGAVWNNDGDTVTLRNADGTTVAAYSY-
#oth            223333412123322121221132333241431544411
HQ3375A         SNS:::L:::KREP::D::::::IIT:H::E::TT:N::
Hmu2611         :::A::F:R:-::PI:::::::A:::A:N::V:::A:::
Hut2367         --------------------------------------:
rrnAC3140       :::E::R::::::::::::D:::IVK::S:A::FRQ:::
HVO_1477        ::::ED:::::G::::::G:::::V:D:T:DE:L::T:E
Hbo0072         ::REGT::::::S:::::G:::I:::D::::V:RERR::