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6 genomes BUD1541 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2442

HVO_1941

Hbo1811

Hmu0029

Hut0193

- -

HQ3159A

Pairwise sequence scores
Consensus score2381 Hut0193 rrnAC2442 Hmu0029 HQ3159A HVO_1941 Hbo1811
1845Hut0193 2378 1663 1677 1414 1528 1560
1940rrnAC2442 1663 2374 1765 1488 1558 1627
1922Hmu0029 1677 1765 2378 1440 1550 1641
1756HQ3159A 1414 1488 1440 2519 1629 1723
1853HVO_1941 1528 1558 1550 1629 2369 1759
1954Hbo1811 1560 1627 1641 1723 1759 2417

339 symbols
consensus       MTDTDATPDADQSDS------------------AVDDAARLATRIIENVERVIVGHHDAI
#oth            ...23233353333212211111111111111131321432122121...1....12311
Hut0193         :::IES::TET:R:L::::::::::::::::::D:::VGGI:DDV:::::::::::P:::
rrnAC2442       :::::-::HSQ::::::::::::::::::::::PLR::T:V:NQV:::::Q::::Q:A::
Hmu0029         :::::-:SRGSH::::::::::::::::::::::LGE:N:V::QV::::::::::::EE:
HQ3159A         ::::N:NT:T:T:TETNTIDIDSRVSSTDRDPL:::EV:A:T::::D:::::::::RN:A
HVO_1941        :::AH:DA:F:PAP:::::::::::::::::::-:EAVSD:::::S::::::::::::::
Hbo1811         :::A::V:::TPKA:TVS:::::::::::::PLP:E:::D:T:::TD:::::::::R:::

consensus       EHILIALLARGHLLLEDVPGVGKTMLARAIAASFDGSFKRVQFTPDLLPSDVTGVNVFNQ
#oth            .2.221211...2.............1111.2.2211.2.1........2....1.111.
Hut0193         ::::T::F::::V:::::::::::::S::::::::C::::::::::::::::::A::Y::
rrnAC2442       :::V::::G:::V:::::::::::::::SV::::::E::::::::::::T::::::IY::
Hmu0029         ::::T:M:G:::I::::::::::::::K:V:::::::::::::::::::::::::::Y::
HQ3159A         :D:::TM:::::::::::::::::::::S::T:LEC::N::::::::::P::::::::D:
HVO_1941        :D:IV::F:::::::::::::::::::::::T:IE:E:E:I:::::::::::::::::::
Hbo1811         :N::::V::::::::::::::::::::::V:I:LG:::::::::::::::::::::::::

consensus       QTQEFEFRPGPIFANVVLGDEINRAPPKTQAALLEAMEEQQVTVDGETHRVPDPFTVIAT
#oth            1132.1.12..1.1................1....1.1.3..11..3113..1..1....
Hut0193         K::T::::S:::::::::::::::::::::S::::::::G:::I:::::S:::::A::::
rrnAC2442       K:::::::::::::::::::::::::::::S:::::::::::S:::T::P::Q:::::::
Hmu0029         ::ET:T:QE:::::::::::::::::::::S::::::::E::::::D:RD::::::::::
HQ3159A         :Q:V:::Q:::V:::::::::::::::::::::::V:A:::::::::::P::::::::::
HVO_1941        ::S:::::E::V:G:::::::::::::::::::::V:::L::::::V:R:::::::::::
Hbo1811         ::R::::Q:::V:::::::::::::::::::::::V:::::::::::S::::::::::::

consensus       QNDVEPNRTYDLPMAELDRFMKKLHLGYPNEADETELLGRVVGHHPIESLEPVASVEDVR
#oth            ..11.2211.2..3..2...11113....2133.211.22.312...13132..123224
Hut0193         ::T::RD:::::::::::::::::E::::TAG::S:M:EN:::T::::AV:::::LA:LE
rrnAC2442       ::T::Q::A::::::::::::T::::::::::A:::M::D::::::::D:TS::TLDALS
Hmu0029         ::T::Q::::A::::::::::::::::::SAD::AAM:A:::SD::::R:S::::::EF:
HQ3159A         :::I::TQ:::::V::V:::T:QIQ:::::::E::::::::A:::::::::A::T::::N
HVO_1941        ::::::D::::::L:::::::::I:::::T::E::::::::S:::::::::::::AG:::
Hbo1811         ::::::::::E::I::I:::::::R::::S:TQ::::::::T:D:::D::D::::::::L

consensus       RARETVADVTVEEPVRSYVTRLARYTREHAQLGVSPRGSIALLRAAQARAVLDGRDYVIP
#oth            311222221112112.2.121..22..3213..1...1212.1.11.1..1121.11.1.
Hut0193         DI:AVT::::::::::T:::::::F::N::E::A:::A:VL::::::G::::N:::::V:
rrnAC2442       A::::::::A::::I:::A:::::::::N:::::::::::S::::::::::::::N::::
Hmu0029         ::QR::S:::I:A:L:E:A::::::::::G::::::::::::::::::::::::::::V:
HQ3159A         :::::::AT::S:S:::::AQ::G:::DN:R:::::::A:::V:V::::::FE:::F:::
HVO_1941        D:::RIL::::S:::::::S:::AD::AG:D:::::::::::V:::::::A::A:N::V:
Hbo1811         Q::R::SQ:::R:::::::S:::G::::::::::::::G:::V::S:::::F::::::::

consensus       DDVQTEARVVLPHRIRT-AAERTGAALVARALDTVPVE-
#oth            ..122.242112...113332322132.34..13.21.1
Hut0193         :::::::T::::::::SG:::::A:D:::D::EN:::::
rrnAC2442       :::::::P:::::::::ESS:QDAR::::E:::::Y:::
Hmu0029         :::RA::::::::::::DT::Q:::G::RT::::::I:E
HQ3159A         ::IHA:IHPTWS:::Q:::DTVDS:HV:DN:::E::I::
HVO_1941        ::::R:V:S:WA::::::TD::A:RDV:Q::::::::::
Hbo1811         :::::::QS:WA::::::DGDD::::I::::::R:A:::