6 genomes BUD1544 6 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1172 HVO_1345 Hbo0205 Hmu1459 Hut1247 - - HQ2338A

Pairwise sequence scores
Consensus score	814	rrnAC1172	Hmu1459	Hut1247	HQ2338A	HVO_1345	Hbo0205
621	rrnAC1172	835	626	642	446	498	485
634	Hmu1459	626	829	656	489	505	486
703	Hut1247	642	656	930	495	575	558
590	HQ2338A	446	489	495	794	612	590
664	HVO_1345	498	505	575	612	792	660
647	Hbo0205	485	486	558	590	660	797

128 symbols
consensus       MVD--PLQLSLD-PQQLGLEFGGGAVIGGIIGFAAKKIAKLIAVIVGIELALFKFLESRG
#oth            141212...32221112.1.1.1.11..11...1...1..1..211.1...2.....1.1
rrnAC1172       :GEF:V:::DGLGL::M:::::::GL:::::::::::V:::::::::::::::::::T::
Hmu1459         :IEL:::::E:PGL::V:::V::::::::V:::::::V:::::IL::::::::::::T::
Hut1247         ::EFN::::G::S:::::::V::::::::V:::::::::::::I:I:L:::::::::T::
HQ2338A         :::::L::::::::T:::I:::S:::::AV:::T:::V:::::LL::::::I:::::::D
HVO_1345        -M::::::::I:::::::I:::S::::::::::::::::::::::::L:::V::::::::
Hbo0205         :P::::::::::::TS::::::S:::::::::::::::::I::::I:L::::::::::::

consensus       ILEVNWEAITGGAANATQ-------------AGAAATGQPPSWISSILSTLPISAGFTGG
#oth            .13.1.321222253313111111111111211511422..2.1213..1.1111..11.
rrnAC1172       ::::::N::G:A:Q:::G::::::::::::T::N::AT:::::VT:L::A::V:::::A:
Hmu1459         ::::::S::S:T:G:VSS::::::::::::A::ET:GA:::G:VM:L::A::V:::::::
Hut1247         ::::::D::S:A:E:::GVATNATGMVNNST::G:::A:::::VM:A::::::G::::::
HQ2338A         :IF:D:SRL:A:L:ET:::::::::::::::--S::D:T::G:::T:::::SV:V:::::
HVO_1345        :IT:D::RL:::LVS::::::::::::::::--D::::A::D:::TV::::S:::::S::
Hbo0205         ::A:D::KL:N:FMKS:E:::::::::::::--::TS:A::::::T:::::S:::::S::

consensus       FLVGFKKG
#oth            ..1..1..
rrnAC1172       ::::::::
Hmu1459         :::::R::
Hut1247         ::::::::
HQ2338A         ::A::R::
HVO_1345        ::::::::
Hbo0205         ::::::::