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6 genomes BUD1547 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1032

HVO_2173

Hbo2930

Hmu0582

Hut1756

- -

HQ3593A

Pairwise sequence scores
Consensus score2502 Hbo2930 HQ3593A Hut1756 Hmu0582 HVO_2173 rrnAC1032
1145Hbo2930 1932 833 982 1009 905 1002
1569HQ3593A 833 2868 1347 1238 1302 1195
1824Hut1756 982 1347 2754 1457 1358 1458
1853Hmu0582 1009 1238 1457 2584 1400 1526
1823HVO_2173 905 1302 1358 1400 2432 1525
1866rrnAC1032 1002 1195 1458 1526 1525 2522

408 symbols
consensus       ----------------------------MA--EDWRLLLPRPVRTLPADLAAVVAFVALT
#oth            111111111111111111111111111112445422221.131.3..1.12412242532
Hbo2930         ::::::::::::::::::::::::::::--::M:::::::::L:::::::G::LVL:V::
HQ3593A         MVCLRYISTRQPEILTNYTSRISIHTHR:NRQ:IV:IVF::S:::::::IKLIFVYLSVM
Hut1756         ::::::::::::::::::::::::::::::HGS:::::::EN::R::F:::F:F:::GAV
Hmu0582         ::::::::::::::::::::::::::::::DDVQ::A:::E:::::::::::::::TLF:
HVO_2173        ::::::::::::::::::::::::::::--::----:F::E:::S::::::V:::G::::
rrnAC1032       ::::::::::::::::::::::::::::::ETKA:K:::::QL:H::::::G::CV:I::

consensus       NLAALLPGVSETPLRIILGLPFVLFIPGYAFIAALFPE--RGPRSTDTEDADRES-----
#oth            422323.2242..2.322..113..2...111......1142334414315434411111
Hbo2930         VA::TI:VIKG::I:::::::YL:::::::LV::::::::AAE:::RMD:NET:I:::::
HQ3593A         C::I::::IR:::I:AG::::::::V:::L::::::::::---ETA::G:DTDA::::::
Hut1756         ::SVF::F:QD::::VVF::::::::::::::::::::::::Q:AV::::TAD::HAAPS
Hmu0582         AA::TV:::::::::VV:::::T::V::::::::::::AGT::AEH:DA::::TE:::::
HVO_2173        LVVT:T::LA:::::D:A::V:S::L::::L::::::::::::-PI:A::R::--:::::
rrnAC1032       :::::::V:::::V:::A::V:::::::::::::::::AGS::-:::S:TGSNPQ:::::

consensus       --EGGIDGIERVALSFGLSIAIVPLIGLVLNFTPWGIRLVPILVSVSGFTLVATAVAARR
#oth            1132.......1.....2...2...2..1.....1.1..4..21322311222222.14.
Hbo2930         :::S:::::::::::::::::V::::::L:::::::M::I::VAI::A::VIL:F::S::
HQ3593A         ::QS:::::::::::::M::::::::::::::::F::::A::M::ILL:CV:TAV:::N:
Hut1756         TA:::::::::::::::::::::::L::::::::F:::::::M:T::I::I:TG:I::Y:
Hmu0582         :::::::::::::::::::::L::::::::::::::::::::::G:G::::A::::::::
HVO_2173        ::M::::::::::::::T:::V:::L:::::::::::::G::::TL:::::::::F::T:
rrnAC1032       ::AD:::::::T:::::::::L:::V:::::::::::::L:::::L::L:::L:::::V:

consensus       RQALPEEERFRVPYRAWIAAARDELFEPASRTDAALNVLLVVSILLAAASVGYAVAVPKQ
#oth            .32.1221.12111231343233..13.3111.12..11.12.22..211111.12..22
Hbo2930         ::::N:TD::V:::ER::TD:KA:::A:D::A::::::::::::::::G:T:::IF::PP
HQ3593A         ::T:::::::SIDFW:YYEQIV:::YY:E:QA:KV::I:::::V:::VG:::::::::::
Hut1756         ::E::P:::::::::Q::DS:GE:::::N::::::::::::I:::::T:::A::::::::
Hmu0582         :RE::A:D:::::::T:L:S::T:::::ET::::::::::AL:MI::VGT::I::T::G:
HVO_2173        :S::::D::LV:::ER:F::::::::S:::::::M:::V::::VV::T:::::::::::D
rrnAC1032       :W:::AD::::::::::LS:G:E:::S::::::::::::::L:::::::::::::T:::D

consensus       GESFSELYLLTEDDDGELVADNYPEEFTRGEPASLVVGIGNQEHEQTNYTVVVELQRVTL
#oth            ..3.112.....23211.2..2113223312233242122121.2324113243214124
Hbo2930         ::Q::::::::::ES:D::::EISDGVHPRRGKA-----TAHR:R---------------
HQ3593A         :::::::::::::AN:::::::::Q:L:T:K::T:TL::::N::Q::S::A::T::Q:::
Hut1756         ::A:T:A:::::S:::D:::::::TN::V:::Q::L::VS:H:::P::::I:::::E:::
Hmu0582         ::::::F:::::::::::I::::::::V:::SKPV::::::::::P:D::::M:I:N::F
HVO_2173        ::::T::::::::GND::T:::::::LV::::::::L:V:::::RTV:::::TV::::EV
rrnAC1032       ::R::DF:::::GE:::::::G::T::E:::GR::I:::::::::::E:::IA:::::ER

consensus       INNSTTVRERR------------------ELRRFRPRLAHNETWHRTHEVEPTMTGDRLR
#oth            533443453342332211111111111112131233414212.33442323243313421
Hbo2930         -----------::::::::::::::::::KP::A:SAVHRSS:TPSRRKA:---------
HQ3593A         ::E:ANETRV:VDSQK:::::::::::::R:QTYEVE:P::::R:I:::ITADTP::QQ:
Hut1756         LE:GS:RVN:TAQNATRATNMSIRVDRAV::D:::TS:::::::LQE:T:A:PFA::D::
Hmu0582         TGPNG:QS:V:AED:::::::::::::::::A:Y:T:::D:::D:::VD:::::::RN::
HVO_2173        S::::::L:SE::::::::::::::::::R::T:T:::E::::::EP:::R:::::E:::
rrnAC1032       VG:E:Q::::S:::::::::::::::::::::::Q:T:G::K::Q:Q:::::E:::E:::

consensus       LTYLLYRGDPPADPSTENAYREVHLWVNVSA-----------------
#oth            132321323213433443111232111314443221111111111111
Hbo2930         -------------------------------:::::::::::::::::
HQ3593A         ::::::KNS:::N:T:K:::::::::::::QPSGSQQSVTQPVIPANR
Hut1756         :::QV::::::::::::S:::WLA:::D:ASDGAG:::::::::::::
Hmu0582         :LFT:::::A:D:A:I:T::::T::::::::TNG::::::::::::::
HVO_2173        ::::::E:A:::A:TAD::::::::::T:R:E::::::::::::::::
rrnAC1032       :Q::::::S::ETVDQST:::::::::::TG:::::::::::::::::