| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 3754 | VNG2346 | HQ1479A | hla0451 | Hmu0538 | rrnAC3297 | HVO_0060 |
| 2794 | VNG2346 | 3973 | 2540 | 2481 | 1948 | 1940 | 2021 |
| 2893 | HQ1479A | 2540 | 3946 | 2579 | 2035 | 1942 | 1937 |
| 2798 | hla0451 | 2481 | 2579 | 3911 | 1944 | 1934 | 1898 |
| 2475 | Hmu0538 | 1948 | 2035 | 1944 | 3743 | 2011 | 2107 |
| 2413 | rrnAC3297 | 1940 | 1942 | 1934 | 2011 | 3712 | 2234 |
| 2422 | HVO_0060 | 2021 | 1937 | 1898 | 2107 | 2234 | 3627 |
537 symbols consensus M--------THEDDADDLTRRDTQPLRARITANPQPALRWAVVAAVLLALELGALLGGLL #oth 13221122423355543325244432341243314.213.223322.232.321423331 VNG2346 :AAN::::T::A::TR:T:::S:DG:WT::RT::::::::G::::::VV::::::T::I: HQ1479A :CARSHTTS:V:TT:::PFQ::G:SV::::::E:T::I:::::::G::::::::F::::: hla0451 :SDR::::H:T:SIREE::H::NLS:S::V:ET:E:F:::::PMF::I:V:FATWA:IAV Hmu0538 -:::::MAGA:GPSS:AADDEV:PETAST:LPTES:T:V:VGLG:G:::::V:::ATF:V rrnAC3297 -::::::::---MMETE::EDID::::D:LK:H:R:::L:GAGLCL::L::GPTY:D::: HVO_0060 -::::::::------VST:TETEI:::Q:VAE::::::I::A:G:::IGA::::I:Q-VV consensus GALDGLVLGLT--I--------PGLAG-V-D-Q---AGAIEGARAAARELPTLLSRELIP #oth 23232324222231222223231321231213123224234334322541.1.21.121. VNG2346 TLV:A::M:V:GL:DVIVGLVS:A:::R:V:V:LALSTF:::V:ST:QS:::::::DV:: HQ1479A TI:::V:I:::AF:DIAVGVIN:Q::AT:V:I:TTASN::TT::D::EGI:::::::TV: hla0451 :M::A::::V:AV:EIALSYVT::::QV:I:F:TGAV:MLRDVGGTLG:::::FG::::: Hmu0538 AI:SDTLAA--::-::::::::AS:P::-:-:-:::V:FV::IE::::Q::::::::TV: rrnAC3297 ::I-:FG:::L::-::::::::::AP::-:-:-::::E:FAS:S:FFS:::H:::::::: HVO_0060 ::VA:V:VN:L::-::::::::::DP::-:-:-::::S:VQSLQ::FDAI:::V::DV:: consensus NQGYWDGP-----------GAWQGTFLGLEPAVAWAIRFALIYAYALFVAYWAFRGWLTF #oth .2.143112111111111143141111.13.33..31.321223.222222.333.1441 VNG2346 ::::N:-:STVRSFLGLSYN::T:P::::S::A:::::M::TL::S::TF::LY:::::: HQ1479A :::HLM::D:::::::::::P:A:PIF:V::GL::VL:AL::IG:S:::F::I::::TI: hla0451 :::HQT-:D:::::::::::S::::::::Q:::::::::S::I:::::T:::V:::::VY Hmu0538 :E:::N:-:::::::::::QR:V::::::R:E:::G::V::::L:::A::G::VL:YRLY rrnAC3297 :R::Y::-:::::::::::S:::::::::::KY::L:::L:V:V:VAVLLG:LWY:YV:: HVO_0060 :::::::-:::::::::::TSYEN:::::S::::::::V:VV::::FA:LA::WN:YKR: consensus RRHYRAADWTPRDDVVDRLRNHRWGQFGLIVVILFLTMALFAPALGPTTVEQNIRSPY-- #oth .31..312...1..2111113.3..2..121234.21.13.12211.1.223.1541.11 VNG2346 :T:::R:G::::::M:N:::::S::K::IV:LV:::::S::GTT:A:S::Q:::TAS::: HQ1479A :D:::H:E:::T::I::::SE:::::::I:IIA::::::::G::::::::::::I::::: hla0451 :E:::E:::::T::I::N::G::::::::::L:V:::::T:GS::A:S::D:::Q:::AE Hmu0538 ::E::::::::::::I::F:::G::L:::A::FM:VV::V::::::::::DK:M:NS::: rrnAC3297 :::::::::::T:::I::::S:Y::L:::A::VF:I:::A:::VV::::A:E::EG:::: HVO_0060 :::::RV:::::::::N:F:G:S::K::::I::T:VV::V:::::::::M:R::LQ:::: consensus DNEIQYLSADTQTVETILAGEANLNSKSKGAGEQNVGPMSYDDFGRFHPFGTLPNGRDLF #oth 32232.3231132...132.1..13.3.2.33231.1222..112....1..122.1... VNG2346 G::V::V:D::GA::::P:::::F::::::NPA::::V:T:::Y:::::::::::::::: HQ1479A SH::T::NT::::::::T::D::FD:::::SS::::::::::E:N::::::::::::::: hla0451 E:Q:::::EE-G::::VF::D::F:::::::V:T:::V:::::YS::::::::::::::: Hmu0538 :::LT:WD:E:DS:::::V:::::A:Q:R:D::ER::::E::::::::::::::T::::: rrnAC3297 SHDM::YD:::E:::::TI:::::G:A:R:S:DS:::IW::::::::::V:::VS:K::: HVO_0060 :Y:VS:W:E:::S:::V:V:::::G:G:Q:::DE::A:LT::::::::::::AT::K::: consensus TFMMGGARISLIIAGLAIGIAGGIAATLALISAYYKGRVDLGVLLVSDGVVAIPQLLLLI #oth .2322.112114132412231321133.113211.2.44..331121.11213.21111. VNG2346 :Y:::::ETT:MVT:I:::M::F:::L:::V:S::G:T:::S::TLA::I:S:::::::: HQ1479A :::::::::T::V::::::LSSL::::::MM::F:G::I:::I:TTA::::SV::::::: hla0451 :::::::::TM:VS:M::TG:A:V:M::SML::::R:SL:::::T::::::S:::::::: Hmu0538 ::IAV:S::::V:GL:SV:LSV:V:TS::::G::::::::::MV::::::M:M::::::: rrnAC3297 ::LAF:::V::F:GLGSMA:::F::T::::VT:::::VT::I:V:T::S:Q:M:A:::V: HVO_0060 :QVVF::::::T::VV:M::::L:GLG::M:T:::::LA::ATV::::SIQ:L:VIMV:: consensus MVSVVFADHWLAELYDGAFLLALIFAFTGWPFLWRAVRGPALQVAEEEWVDAAKSFGQRP #oth 142211211.233122.13.21.2.2223.132..12.......2223.11..2.1..3. VNG2346 ::::::Q::::KSVFN:GL::::V:GL:T::V:::SL:::::::::::::::::::::Q: HQ1479A :I:A::::::::TVL::G:::::::::::::::::::::::::::R:S:::::R::::T: hla0451 :::A::::T::GGVL::G::::::::::T::::::::::::::::Q::::R::E:Y::Q: Hmu0538 :LTT:LK:T:V:G::S::::::::::::::TYM::SL:::::::S:RQ:I:::::::::: rrnAC3297 LAT:::KN::I::::N::M:FI:L::LIR::G::::::::::::G:Q::::::::Y:::: HVO_0060 LML:I:QNT:VR::::::V:II:::SIVY:::I::SI:::::::S:QD:I::::::::S: consensus RTIMRKHMLPYILGYLLIYASLSLGGIIISLAALSFLGNGLGITPPTPAWGRAISLGQSY #oth 232..1..1..121.1.1.1.112..21.2312..1..11..121...1...1124..3. VNG2346 TVT::::::::V:::::::::MTV:::V:AM:S::::::::::::::::::::::Q::P: HQ1479A :::::::::::VT::::V:::::T:::::G:::::::::::::::::::::::V:::::: hla0451 :K:::::::::::::::V:::M:V:::::::S:::::::::::D:::::::::::A:::: Hmu0538 :::::Q::::::T::::::G:MT:::A::AI:G:::::--::VS::::E::::VN:::E: rrnAC3297 TV::::::A::::::::V::::T:::V:::VS::::::--::::A:::E:::::NI:::: HVO_0060 SQV:::::A::VFS:M::::::::::::::V:G::Y::--::::A:::E:::L:AN::Q: consensus VSSASWHISLIPGLLITLLVTGLNALGDGIRDAIDPESE--GGDG---EAAATGGGA #oth 1215....1.1..12.111...3..11..1......22211222432231123...1 VNG2346 ::::::::A:::::I:VV::::A::::::::::::::::::::SEE::::::::::: HQ1479A :::S::::::L:::M:V::::::::F:::L::::::::N:::S:Q:::TEGV::::: hla0451 :::V::::::::::M:V:::::M::::::::::::::T:::S:E:::::E::A:::: Hmu0538 :DTG::::::::::::::V:::F:::::::::::::R:DAA:S:ADDGA::GR:::: rrnAC3297 IA:Q:::::::::I::::V:::F:::S:::::::::Q:::::AE:GATG:::G:::G HVO_0060 :A:P::::::L:::::::V::::::F::::::::::QAD::T::-::::::::::::