| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 2698 | Hmu0539 | rrnAC3296 | HVO_0059 | VNG2344 | HQ1478A | hla0452 |
| 1822 | Hmu0539 | 2519 | 1561 | 1596 | 1634 | 1604 | 1506 |
| 2056 | rrnAC3296 | 1561 | 3091 | 1894 | 1755 | 1757 | 1768 |
| 2019 | HVO_0059 | 1596 | 1894 | 2716 | 1698 | 1692 | 1719 |
| 2120 | VNG2344 | 1634 | 1755 | 1698 | 2764 | 1843 | 1838 |
| 2149 | HQ1478A | 1604 | 1757 | 1692 | 1843 | 2883 | 1905 |
| 2068 | hla0452 | 1506 | 1768 | 1719 | 1838 | 1905 | 2738 |
429 symbols consensus -----------------T-TARSARPRDEPLLSVRNLRTVFRTDRETIRAVDGISFDIRR #oth 1111111111112324434225345432122.1131.311.2113.4.2...11212142 Hmu0539 :::::::::::::::::-:------VS::::::::D:EV::H:E::Q:H::::VN:E::E rrnAC3296 :::::::::::::::::-:--M:HTEDG::::A:D::::::HS:::E::::::V::E:A: HVO_0059 :::::::::::::::MS:EQ:::::TEG::::::E::::S:Y::K:V:::::::::::F: VNG2344 :::::::::::::MQST:P::DDDD::::SI::I:::Q::::::H:H::::::::LS:SP HQ1478A MESSAGSNSDSMIPDVDRK:ST::Q:D:DVV:::H::T::::::::::Y:::::D::V:: hla0452 ::::::::::::MSQPQNT::EATEG:ED:I::::D:Q:::Y::N:::::::S::::VG: consensus GETVGIVGESGSGKSVTARSIMGLVDAPGEILEESSIRFDGEELTDLSADQYRSIRGDGI #oth .1.1.1...............11.113..2121312.422141.12313122232..231 Hmu0539 :Q:::L:::::::::::::::L::::E::R:-:GGE:LYR::D::E---:NWADH:::-: rrnAC3296 :::L:::::::::::::::::::::ES::::R::::::L::R:::A::EKE:::V::GD: HVO_0059 ::::::::::::::::::::::R::EK::R:-:NGR:MY:::D:L:K::K:M:::::GS: VNG2344 :::L::::::::::::::::::::::::::V:P::::V:::T:::E::::::QEV::S:V HQ1478A ::::::::::::::::::::::::I:::::::PA:::::NND::::Y:D:E::A:::::: hla0452 ::::::::::::::::::::::::IES::KV:PG:::S:::Q::::::EK::Q::::S:: consensus AMVFQDPLQSLNPVYTVGNQIREALRINRDIRGEEATDEAIELLEAVGIPDAARRLDEYP #oth 111....24.......1....3.1.2211223.42.243.12..11.1...14..12.1. Hmu0539 :I:::::TN:::::::I::::E:::::HQ:L::RA:::R::::::D::::::P::V:::: rrnAC3296 ::::::::S::::::::::::I:::ELH::ME:A::KS::::::R::::::::::V::F: HVO_0059 ::::::::T::::::::::::K::::LH:GLS:SK::K::::::::::::::H::VR::: VNG2344 G:I:::::K::::::::::::::::::::G:T:Q::::V::D:::D:A:::PE::::::: HQ1478A G::::::Q::::::::I::::::::AV:QN::::::RRQ::::::::A:::P::::S::: hla0452 G::::::Q:::::::::::::::S:A:::::T::K::T::TR::R:::::::K::::::: consensus HEFSGGMRQRAVIAMALACDPDLLICDEPTTALDVTIQAQILDLLQEIQAERDLAILFIT #oth 111....1.......1.....12.1................11..411.311112.1... Hmu0539 :QL::::A::::::::::::::::V::::::::::::::::::::A:L:::Q:::::::: rrnAC3296 :::::::::::::::::::::::::::::::::::::::::::::::::T:::IG:M::: HVO_0059 :Q:::::::::::::::::::E::::::::::::::::::::E::E:L:E::::G:M::: VNG2344 N::::::::::::::M::::::V::::::::::::::::::VE:::D::::::::::::: HQ1478A :::::::::::::::M:::::EF::::::::::::::::::::::S:::QK:::S::::: hla0452 :::::::::::::::M::::::F:::::::::::::::::::E::K:L:E::G:S::::: consensus HDMGVIAEIADRVNVMYAGEIVEQAPVEELFANPQHPYTRGLLDSIPGRR-DRDDRLPTI #oth .....1122211.1.2...12..3.1123..32.3....11..41...35135211.4.. Hmu0539 ::::::EDAT:W:::I::::V::R::T:A::DH:A:::::A::E:::::T::P:E::::: rrnAC3296 ::::::::V::::A::::::V::::::K::::::H::::Q:::Q:::::N:PST:::::: HVO_0059 :::::::::::::::::::::::S:::V:::ES:K::::Q:::N::::QGL:E:E::A:: VNG2344 :::::::::S::::::::::F::K::::::::::K::::Q::::A:::TS:VD:E::N:: HQ1478A :::::::Q:::::::V::::::::::::R::QS:::::::::::A::::::SG::G:R:: hla0452 :::::V:D::N::::::::Q:::K:T::D:::::::::::A::R::::EH:S:A:G:E:: consensus EGDVPTPNEPATDCRFAPRCPKAFDECEAVHPQHVSVGDSAD-HTAACLLYPDDLPETER #oth ..2....232124...11..111.22.35.2.31.212145311211...1133333443 Hmu0539 ::E::::TG::::::::::::E::ED:RS:A:E:::LDGD--:RS:::::---------- rrnAC3296 :::::::H:S:SF:::VS::::G:::::R:::A::E::::::::::::::::E:M:TDDT HVO_0059 :::::::::DP:Y:::::::::::T::DT:::EP:E:::GTGR:R:S:::::::::TE:A VNG2344 ::::::::Q:::::::::::::::ED:TE:::T::::S:TH:::ST::::::EGKSR::: HQ1478A ::::::::A::SN:::::::::::::::::P::::::D:NST::::::::::AEME:SP: hla0452 ::Q::::::::DH:::::::S::::A::N:P::::P::::E:::::S::::::::S::A: consensus VARH------------------------------------------------RAPARTEG #oth 135133111111111111111111111111111111111111111111111124423232 Hmu0539 ----::::::::::::::::::::::::::::::::::::::::::::::::HD:::SD: rrnAC3296 :TQ:EANADQTGAEADEALSADDWPAAKRNAGEDTSPVGSDDSDARADGGHGHSAGD:G: HVO_0059 ::V::::::::::::::::::::::::::::::::::::::::::::::::::EGGQRG: VNG2344 :EH:RS::::::::::::::::::::::::::::::::::::::::::::::Q:::D:Q: HQ1478A ::K::::::::::::::::::::::::::::::::::::::::::::::::::RR:E::A hla0452 :E::VE::::::::::::::::::::::::::::::::::::::::::::::::TE:::E consensus DAR------ #oth 234412221 Hmu0539 GE:Q::::: rrnAC3296 HSEGGDPDE HVO_0059 :T::::::: VNG2344 G:QE::::: HQ1478A ::NTGEYHE hla0452 HS-::::::