|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 1983 | HQ3657A | hla1478 | Hbo1349 | HVO_0224 | rrnAC2766 | Hmu2822 |
613 | HQ3657A | 2425 | 321 | 461 | 451 | 385 | 364 |
1024 | hla1478 | 321 | 2183 | 521 | 560 | 625 | 537 |
1107 | Hbo1349 | 461 | 521 | 2097 | 749 | 549 | 566 |
1173 | HVO_0224 | 451 | 560 | 749 | 2151 | 564 | 690 |
998 | rrnAC2766 | 385 | 625 | 549 | 564 | 1933 | 704 |
1077 | Hmu2822 | 364 | 537 | 566 | 690 | 704 | 1984 |
337 symbols consensus --------MDLDCDADRVDGVTLVTVRVRNDAAVPRRVRVRNRLDGPVLPPRRAGVPEPG #oth 1111111215524325242113..323141333222.112221.21.11...34.2.14. HQ3657A :::::::::QTSVSTH:AAN:I::A:T:Y:NTS:DC::::Q:::N:::::::Q::I:AS: hla1478 MRYRGTPP:::AW:V::EGN:S::RC:::::D:::::::IES:::A:::::::G:I::T: Hbo1349 :::::::::EY::TTKT:G:T:::::H:::E:::::::::::D:P:::::::QD::::R: HVO_0224 :::::::::HS:I:VSAD:::A::S:::D:::P:D::::L:::::::::::::::::::: rrnAC2766 :::::::MVTF::R:E:::::::::AT:G:I-:E:T:IT:Q::::::LW:::TQ:::AA: Hmu2822 :::::::MVSV:AS:TAI::::::::SLAS:-GLA:::::EQ::::::W:::CE:E:::: consensus WDEDGYEGVVPAGDRLALGYACP-APPADQPAEV----------VSVETLPDADEEDDAA #oth .133.2212231253412.1.31221243413333332332222223.442233243335 HQ3657A ::AA::N:H::::K:MTI::::::SDDN:DDDT:PSIDET::::::::AHA:SIIDNTSI hla1478 :::S:VTLRLDP:E:R:F:F:AS::::::P:V::TEVAAVDPTEQ:G::N:SE--GAETV Hbo1349 ::D:::T::IA:D:E:T::::::GGDETET:---::::::::::::::S:GR::::R:TE HVO_0224 ::NE:F:::::::STV:::::V:LS::G:RD::AVDADGLPEHA:D::::GR:::S:E:: rrnAC2766 :S:::F:::LRPETQ-:::::T:::::SA::::L::::::::::::T:PA::TTIA::RL Hmu2822 :::S::::::::DG:::::::T::::::R::VA:::::::::::EER:VV:::--::A:G consensus DSA----TAAAIRELGDARPPADAVPTPA--R--E-ADA-PPTASAPETDETADD----- #oth 32222223331113..231..312114344433424221224434123424424333332 HQ3657A NTSISSP:D:V::T::RS:::I:TI:DSNPISRSSSDSPTDNM:ET:G::RHITSAVSAS hla1478 E::::::::V:L:::::H:::SA::AGG:::-:G:VGG::GG:G::GGS:P:::-::::: Hbo1349 K:SRAELE:E:::S::R:::::::::::SVD:QT:TD::::TD:QTRDLESR:ESVSTNS HVO_0224 ::T::::PEG:::S::S:::::::::VS-::-::-:::P::::V:::::P:S:P:TAGDE rrnAC2766 :::::::-D:VL:::::PS:::A::::AESMHVA:A:S::G:PGPT::Q:IEPQP::::: Hmu2822 ED:::::-T:VLQR:::PS::R:G::A::AV:::-:::PR:DCDT::AVE::P::::::: consensus -PGSQPSADP-------------RQAAGRDSDA----A-----GD-ETRAPRAAGTT--- #oth 123432355.11111111111113333.53225233334444433443432355443222 HQ3657A :KNK:T:LP:CVDTWLTTIEGRFD:SM:S:QSVSNRTRQTRINMMNT:H::::SSKPNKQ hla1478 :A::VN:TG::::::::::::::TVD:::E:::GRVA:PDKSD::LAGS::PSV:::EAW Hbo1349 R:Q:E:EST::::::::::::::::DS:G:::D:::::TSHNE::E:Y::EKEITP-::: HVO_0224 R:DPL:RP:::::::::::::::DA:G:ER:TPSEQPTDADVSAAV:::E::DHE:Q::: rrnAC2766 :A:R::::E:::::::::::::::T:::HQP:Q::::-:::::--:--QL:------::: Hmu2822 :::HV:A--::::::::::::::E:P::DE:TE::::-:::::--:Q:VPD:R::S:::: consensus -DPVE-SWLDAVETRVDRA---------ERLDAA-TAAAATAVLESADGVSALRRLAARV #oth 23232243.33.24.123211111111112233244332113434334123344533343 HQ3657A LTEA:YEA:EE:N::::HITTASPHVADQPIN:LRQI:TR:IDTS:SS:A:DMQHME:S: hla1478 F:AI:::R:::::A:I:::::::::::::::TE::DL:T::E:VAET:::G::SG:DD:: Hbo1349 :K:::::::S::::::QH:::::::::::TVTD::::DE:A::::T:EN::D---:P:T: HVO_0224 :R:S:PAS:A:::R:I:L::::::::::::::G:SV:D::A:LS:AER::E::ES:D--- rrnAC2766 ::A:S:Q::ET:AG:::::::::::::::::AE:DSLS::::AVRT:::L:GV:TV:::G Hmu2822 ::::T:D:::G::E::TTL::::::::::::::VE:VPE::TT:Q:TG:LAPG::A:RAC consensus AADRERLRALAARAEALADRAAATD--PPIDALERLA #oth 32.3421233241133122132221113342213211 HQ3657A :D:SKATCQSRSNS:KHT:INS:P:::RIQS:DGS:- hla1478 :::A::::E:SE::ST:SA::EG::::A::E:::::: Hbo1349 :::EDA:::F::::T:::E:::D::AK:V::::GDR- HVO_0224 -:::::::R:::::T:::::::DA::::DV:::R::: rrnAC2766 ET:EQM:::::R:::R::::R::AT::V:TET:S::: Hmu2822 G:::R::L:V:D::RR::::IE:::::::LSS:::::