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6 genomes BUD1555 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2766

HVO_0224

Hbo1349

Hmu2822

-

hla1478

-

HQ3657A

Pairwise sequence scores
Consensus score1983 HQ3657A hla1478 Hbo1349 HVO_0224 rrnAC2766 Hmu2822
613HQ3657A 2425 321 461 451 385 364
1024hla1478 321 2183 521 560 625 537
1107Hbo1349 461 521 2097 749 549 566
1173HVO_0224 451 560 749 2151 564 690
998rrnAC2766 385 625 549 564 1933 704
1077Hmu2822 364 537 566 690 704 1984

337 symbols
consensus       --------MDLDCDADRVDGVTLVTVRVRNDAAVPRRVRVRNRLDGPVLPPRRAGVPEPG
#oth            1111111215524325242113..323141333222.112221.21.11...34.2.14.
HQ3657A         :::::::::QTSVSTH:AAN:I::A:T:Y:NTS:DC::::Q:::N:::::::Q::I:AS:
hla1478         MRYRGTPP:::AW:V::EGN:S::RC:::::D:::::::IES:::A:::::::G:I::T:
Hbo1349         :::::::::EY::TTKT:G:T:::::H:::E:::::::::::D:P:::::::QD::::R:
HVO_0224        :::::::::HS:I:VSAD:::A::S:::D:::P:D::::L::::::::::::::::::::
rrnAC2766       :::::::MVTF::R:E:::::::::AT:G:I-:E:T:IT:Q::::::LW:::TQ:::AA:
Hmu2822         :::::::MVSV:AS:TAI::::::::SLAS:-GLA:::::EQ::::::W:::CE:E::::

consensus       WDEDGYEGVVPAGDRLALGYACP-APPADQPAEV----------VSVETLPDADEEDDAA
#oth            .133.2212231253412.1.31221243413333332332222223.442233243335
HQ3657A         ::AA::N:H::::K:MTI::::::SDDN:DDDT:PSIDET::::::::AHA:SIIDNTSI
hla1478         :::S:VTLRLDP:E:R:F:F:AS::::::P:V::TEVAAVDPTEQ:G::N:SE--GAETV
Hbo1349         ::D:::T::IA:D:E:T::::::GGDETET:---::::::::::::::S:GR::::R:TE
HVO_0224        ::NE:F:::::::STV:::::V:LS::G:RD::AVDADGLPEHA:D::::GR:::S:E::
rrnAC2766       :S:::F:::LRPETQ-:::::T:::::SA::::L::::::::::::T:PA::TTIA::RL
Hmu2822         :::S::::::::DG:::::::T::::::R::VA:::::::::::EER:VV:::--::A:G

consensus       DSA----TAAAIRELGDARPPADAVPTPA--R--E-ADA-PPTASAPETDETADD-----
#oth            32222223331113..231..312114344433424221224434123424424333332
HQ3657A         NTSISSP:D:V::T::RS:::I:TI:DSNPISRSSSDSPTDNM:ET:G::RHITSAVSAS
hla1478         E::::::::V:L:::::H:::SA::AGG:::-:G:VGG::GG:G::GGS:P:::-:::::
Hbo1349         K:SRAELE:E:::S::R:::::::::::SVD:QT:TD::::TD:QTRDLESR:ESVSTNS
HVO_0224        ::T::::PEG:::S::S:::::::::VS-::-::-:::P::::V:::::P:S:P:TAGDE
rrnAC2766       :::::::-D:VL:::::PS:::A::::AESMHVA:A:S::G:PGPT::Q:IEPQP:::::
Hmu2822         ED:::::-T:VLQR:::PS::R:G::A::AV:::-:::PR:DCDT::AVE::P:::::::

consensus       -PGSQPSADP-------------RQAAGRDSDA----A-----GD-ETRAPRAAGTT---
#oth            123432355.11111111111113333.53225233334444433443432355443222
HQ3657A         :KNK:T:LP:CVDTWLTTIEGRFD:SM:S:QSVSNRTRQTRINMMNT:H::::SSKPNKQ
hla1478         :A::VN:TG::::::::::::::TVD:::E:::GRVA:PDKSD::LAGS::PSV:::EAW
Hbo1349         R:Q:E:EST::::::::::::::::DS:G:::D:::::TSHNE::E:Y::EKEITP-:::
HVO_0224        R:DPL:RP:::::::::::::::DA:G:ER:TPSEQPTDADVSAAV:::E::DHE:Q:::
rrnAC2766       :A:R::::E:::::::::::::::T:::HQP:Q::::-:::::--:--QL:------:::
Hmu2822         :::HV:A--::::::::::::::E:P::DE:TE::::-:::::--:Q:VPD:R::S::::

consensus       -DPVE-SWLDAVETRVDRA---------ERLDAA-TAAAATAVLESADGVSALRRLAARV
#oth            23232243.33.24.123211111111112233244332113434334123344533343
HQ3657A         LTEA:YEA:EE:N::::HITTASPHVADQPIN:LRQI:TR:IDTS:SS:A:DMQHME:S:
hla1478         F:AI:::R:::::A:I:::::::::::::::TE::DL:T::E:VAET:::G::SG:DD::
Hbo1349         :K:::::::S::::::QH:::::::::::TVTD::::DE:A::::T:EN::D---:P:T:
HVO_0224        :R:S:PAS:A:::R:I:L::::::::::::::G:SV:D::A:LS:AER::E::ES:D---
rrnAC2766       ::A:S:Q::ET:AG:::::::::::::::::AE:DSLS::::AVRT:::L:GV:TV:::G
Hmu2822         ::::T:D:::G::E::TTL::::::::::::::VE:VPE::TT:Q:TG:LAPG::A:RAC

consensus       AADRERLRALAARAEALADRAAATD--PPIDALERLA
#oth            32.3421233241133122132221113342213211
HQ3657A         :D:SKATCQSRSNS:KHT:INS:P:::RIQS:DGS:-
hla1478         :::A::::E:SE::ST:SA::EG::::A::E::::::
Hbo1349         :::EDA:::F::::T:::E:::D::AK:V::::GDR-
HVO_0224        -:::::::R:::::T:::::::DA::::DV:::R:::
rrnAC2766       ET:EQM:::::R:::R::::R::AT::V:TET:S:::
Hmu2822         G:::R::L:V:D::RR::::IE:::::::LSS:::::