| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2733 | HQ3202A | hla1693 | Hut2991 | pNG7191 | Hmu1327 | rrnAC3034 | hla1029 | HVO_A0330 | HVO_B0028 |
| 1169 | HQ3202A | 3182 | 815 | 818 | 1156 | 935 | 985 | 971 | 1026 | 982 |
| 1704 | hla1693 | 815 | 2794 | 1454 | 1094 | 1168 | 1286 | 1280 | 1219 | 1371 |
| 1612 | Hut2991 | 818 | 1454 | 2745 | 1187 | 1334 | 1277 | 1243 | 1171 | 1296 |
| 1722 | pNG7191 | 1156 | 1094 | 1187 | 2716 | 1402 | 1464 | 1348 | 1472 | 1370 |
| 1780 | Hmu1327 | 935 | 1168 | 1334 | 1402 | 2731 | 1429 | 1396 | 1362 | 1481 |
| 1926 | rrnAC3034 | 985 | 1286 | 1277 | 1464 | 1429 | 2788 | 1369 | 1457 | 1607 |
| 1796 | hla1029 | 971 | 1280 | 1243 | 1348 | 1396 | 1369 | 2742 | 1468 | 1550 |
| 1795 | HVO_A0330 | 1026 | 1219 | 1171 | 1472 | 1362 | 1457 | 1468 | 2713 | 1586 |
| 1980 | HVO_B0028 | 982 | 1371 | 1296 | 1370 | 1481 | 1607 | 1550 | 1586 | 2976 |
455 symbols consensus -----------------MALADHLDDFERRDWQ-LTG---DGTVRFAMIGLGWWTREQAL #oth 11111111111111123455636444363121276361133311.3.3212..11315.3 HQ3202A MYITSPVTILFRCVNYRKMVRST:SAI:SHTR:IE:T:::-E:::Y:V::::::AT:M:: hla1693 :::::::::::::::MET:F::Y::::T::::EH:DPKAVTDP::V:IV::::FA::W:: Hut2991 ::::::::::::::::::D:M::VSE:A::::ETYD::::A::::::L::A::F:::W:: pNG7191 :::::::::::::::::--MK:WI:AYNG:::::-:T::T:::::Y:LL::::::IDL:: Hmu1327 ::::::::::::::::::::DE:F:::M::::D:-::::A::::::::V:::::::DY:V rrnAC3034 ::::::::::::::::::NVDALTGG:D:::::EQ:A::T:NP:::::::V::::T:::M hla1029 ::::::::::::::::::SA::Y:KTVRD:::EQ:ES:::-::L:I:I:S:::::::::I HVO_A0330 ::::::::::::::::::S:EAF:::::::N::RVSD:::-::::I:V:::::::VD::I HVO_B0028 :::::::::::::::MSP:PT:IVEE:T:::::GDDV:::T::::V::::::::::DE:I consensus PAIAASDLCETTVVVS------SSREKAEAVAAEHDTVEHGLTYEEFHDGAA-------- #oth .1343244312.131211111132513154422364534433223113313311111111 HQ3202A ::LT:A:NATV:TL:AEENINTDTQ:L:RRYG:DTTMTSEQFLSL:TDT:EQHNLIDSTS hla1693 :G::R:AFT:A:::TD::::::VDADAV::::::::VT--:V:PA::RA::V:::::::: Hut2991 :G:ERA:HT:A::::D::::::LDP:R:G:L:D:::LT--H:SP:Q::::V::::::::: pNG7191 :::QD:::G:V:TF::::::::::S:::KRL:D:-NG:D::IS:::::::K::::::::: Hmu1327 ::TQQ:EY::::T:::::::::::P::::SF:E:F:G::TA:::D::T:::G:::::::: rrnAC3034 ::VD:G:::::::L:::::::::D::::AD:::DSE::::AI:::::::::::::::::: hla1029 ::V:D:KF:::::L::::::::::::::S:A:E:IP:::AA::::::T:AE::::::::: HVO_A0330 :::D::G::::::T:::::::::TS:::KR:::GVE:AT:::S:D:::A:E::::::::: HVO_B0028 ::VE::EF::::::::::::::::K::::GAT:LTESIT:::::D:::E:V::::::::: consensus -------------------TDAYDAVYIATPNALHLPYVETAAELGKAVLCEKPMEASVE #oth 11111111111111111114131..2.131..13..1.132..242.11.....3.1241 HQ3202A SSSSSGNESNKPANNSIID::V:::::::::::A::::ARI::AQE::::::::I::N:: hla1693 :::::::::::::::::::V:E:::::V:::::T::E::AA:::Q:::::::::L::TLD Hut2991 :::::::::::::::::::ESE:::::VC::::T::E::::::AF::D:::::::::::D pNG7191 :::::::::::::::::::S::F::I::G::::F::E:AK:::::D::I:::::::ST:: Hmu1327 :::::::::::::::::::::Q:::::V::::::::::::A::SY::D:::::::::::: rrnAC3034 :::::::::::::::::::S::::::::V::::::::::::::::D::I::::::::TI: hla1029 :::::::::::::::::::::E:::A::C:::::::::A:A:::H:::I:::::V::TR: HVO_A0330 :::::::::::::::::::A::::::::CS::::::::AR::::::::::::::I:::S: HVO_B0028 :::::::::::::::::::A:::::::VV:::G:::::::::::::::::::::L::::: consensus RAERLVEACDEADVPLMVAYRMQTDPAVRRARELIEAGVIGDPVHVHGNMSQRLL-ELIP #oth .24412322342322.121..1122.31113131233.42.1135232321142132263 HQ3202A :GNK:RTH:QQ:N::::I:::V:MH:L:KY:::::DQ:D:::VTVIQSHHT:P:::KMH: hla1693 :SR:::A::RD:G::::AG:::::::::::L:D:L::::A::VI:::AT:::TM:G::GS Hut2991 ::AE::::TR::G:S:::G:::HL::V:::SK:F::::A:::V:Q::S:::::MVA::EG pNG7191 :::EM::V:ED:A::::I:::::::::::::KQ:::D:F::E::S:Y::N::P::::MN: Hmu1327 :::AMA::AE--::T:::::::H:::::::M:::VAD:FV:E:T::::H::::::::M:: rrnAC3034 ::::M::V:::H:AT::I::::H:E::::::KD::DE:Y::E:LF:::::TEPI::::V: hla1029 :::Q::::TE--NI::::::::::::Q:::M::::AE:A:::::A:::S:::QM:DTVSD HVO_A0330 :GQQM:D:::::G:::I:G:::H:E::I::::K::RD::::::::AI:TN::AM:::::S HVO_B0028 :::K::A:::R:::::::::::::E:::::::::V::::::E::F:::H::::::D:VV: consensus DPDQ-WRLDPELSG-GAAVMDLGIYPLNTARFLLDADPVAVQAQMRSDHEAFEDVPDEHA #oth 14211...12213.3.3231.1.2.21..4..1.221.3313263636532.33.21214 HQ3202A :TN:::::::AQT:Y:T:I::::V:TI:::::::::::I::S:VTLA:TPG::A:::DR: hla1693 :H:::::::S::::::C:L::::V:::::I::V:G::::R:SGRT:TN::::A::-:::: Hut2991 :ASEQ:::::D:A:::G:M::I:::::::T::::::::EK:S:ETG:T::::A::-E:RV pNG7191 NT::::::::D:::Y:TS:::::::SI::T::::ERE:L:::S::D:HG:::::::::RS Hmu1327 :R::::::N:::A:Q::SIT:::V::I::T::V::R::::::SA:Y:GS:G:::::::R: rrnAC3034 :::::::::G::::::C::::I:::::::S:::::::::::RGTVA:VQ:E:A::::::G hla1029 :T::::::::D:V:Y::S::::::::::::::V::::::S:T:::Q:VDT::RN:::Q:T HVO_A0330 ::N:::::::::A:P::T:T:I:::::::C:::::S::::A::F:Q:S:D::DQ:::::S HVO_B0028 :::::::::::::::::T:::I:L::::::::V::::::R:R:TA:V:D::::A:G:::V consensus AFRLDFDDGVQAVCTASQNAQHDSHLRVTGTDGQLELEPAFY--EDRGLTVSRDGTRVTV #oth 33636221215334232132364253313..414252311.4436456351554254434 HQ3202A :AI:S:P::::L:ANTT:RG::G:GMKII::Q:S:D:QGI:R::GQCS:::AAGDIEG:F hla1693 TY::E:PG::D:L:SV::::::A:R:E:::::AR:I:D::::ER::::FA:V::::::D: Hut2991 :V:AT:EG::PV:F::NH::Y:::F::::::E::VIID:::FER:P:DME:RL::E:HAI pNG7191 GAL:ALE:::KM:T:D::::HR:TQ:KI::::::I::R:::H::GKAK:HL::NE:T::: Hmu1327 :ATIVYE:D:L:SIS::::SYE:GF::::::A:::V:::::L::KPS::::::S:IDA:Y rrnAC3034 ::Q:::PGH:Y:::::::::HL:::IS:L::E:KVRV:::::PWD::A:QL:HE::T:EI hla1029 ::TIR::::T::A:::::H:AYTG:F::I::::E:V:::::LGQPEQT::LHS::R:LE: HVO_A0330 S:MVE::::TYLAA:::::::ATTS::IV::N:EILV::::H::METEIR:T::DVS::L HVO_B0028 S:GV:::::TL:::::::S:YQL::::::::E:E::I:::::NRQK::FRL:WGDQSADY consensus -DFEQ---VDQMEEEFDYFADRLLTDAEPHPDGEHALVDMRAIRAIY--------EAAET #oth 115443445312412.2.12232132533711.42133.334241321111111122223 HQ3202A :EHT:FTLH:E:TAV:E::::C::::KSVS:::AE:IA:LSVM::M:ADGDGNGNDGGSA hla1693 :::D:::::H:I::::A::GHQ::AEEPF::N:T:::A:V:TLA::::::::::::S::: Hut2991 ::VTD::::H:L::::A::::CV:SGR::E::::::ML::Q::E::::::::::::S::: pNG7191 :EH:NFDAE:E:R:::::::::V:::::IV:::R:G:Q:::I::::H::::::::::::S Hmu1327 ::LPEMGEAQ::QA:::::SHH::A:T::PA:::YGV::::V:::AV:::::::::S:R: rrnAC3034 ::::::::I:::::::E:::HC::::T::YA::::G:::INT:KSV:::::::::::S:: hla1029 A:GRRDVMQ:E:I:::::::::VIRE:PI::::D::::::::LE:::::::::::D:::: HVO_A0330 ::TP:::::N::T:L:::A:::I::::PIG:::::GVL:::L:E:V:::::::::::G:S HVO_B0028 :::::::::N::T:::::::S:::S:SD:A:::D::::::::MD:::::::::::A:::R consensus GRTVALD---------------------------- #oth 35514244332111111111111111111111111 HQ3202A NHA:SYPEFV::::::::::::::::::::::::: hla1693 ::PI::TDDAE:::::::::::::::::::::::: Hut2991 :E::RVET::::::::::::::::::::::::::: pNG7191 SDV:E:-:::::::::::::::::::::::::::: Hmu1327 :ER:T:-:::::::::::::::::::::::::::: rrnAC3034 ES::R:::::::::::::::::::::::::::::: hla1029 :T::SV-:::::::::::::::::::::::::::: HVO_A0330 ::V:T:::::::::::::::::::::::::::::: HVO_B0028 :TD::V:AADSDSADSDSADAAAANHDADPDSDGT