|
Pairwise sequence scores | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2099 | HQ3552A | VNG0918 | VNG5149 | Hmu2397 | Hmu2618 | Hmu3363 | Hmu2991 | pNG4001 | rrnAC0972 | HVO_C0052 | HVO_C0064 | Hmu2617 | NP1938A | NP6068A |
335 | HQ3552A | 1242 | 354 | 354 | 322 | 322 | 322 | 218 | 278 | 278 | 335 | 326 | 240 | 365 | 362 |
1743 | VNG0918 | 354 | 2270 | 2270 | 1426 | 1426 | 1426 | 1097 | 1670 | 1670 | 1253 | 1672 | 852 | 1630 | 1624 |
1743 | VNG5149 | 354 | 2270 | 2270 | 1426 | 1426 | 1426 | 1097 | 1670 | 1670 | 1253 | 1672 | 852 | 1630 | 1624 |
1742 | Hmu2397 | 322 | 1426 | 1426 | 1937 | 1937 | 1937 | 1533 | 1511 | 1511 | 1368 | 1558 | 993 | 1448 | 1442 |
1742 | Hmu2618 | 322 | 1426 | 1426 | 1937 | 1937 | 1937 | 1533 | 1511 | 1511 | 1368 | 1558 | 993 | 1448 | 1442 |
1742 | Hmu3363 | 322 | 1426 | 1426 | 1937 | 1937 | 1937 | 1533 | 1511 | 1511 | 1368 | 1558 | 993 | 1448 | 1442 |
1369 | Hmu2991 | 218 | 1097 | 1097 | 1533 | 1533 | 1533 | 1565 | 1186 | 1186 | 1036 | 1226 | 952 | 1155 | 1149 |
1816 | pNG4001 | 278 | 1670 | 1670 | 1511 | 1511 | 1511 | 1186 | 2272 | 2272 | 1438 | 1977 | 897 | 1694 | 1688 |
1816 | rrnAC0972 | 278 | 1670 | 1670 | 1511 | 1511 | 1511 | 1186 | 2272 | 2272 | 1438 | 1977 | 897 | 1694 | 1688 |
1484 | HVO_C0052 | 335 | 1253 | 1253 | 1368 | 1368 | 1368 | 1036 | 1438 | 1438 | 1671 | 1592 | 979 | 1327 | 1321 |
1882 | HVO_C0064 | 326 | 1672 | 1672 | 1558 | 1558 | 1558 | 1226 | 1977 | 1977 | 1592 | 2275 | 949 | 1699 | 1693 |
1064 | Hmu2617 | 240 | 852 | 852 | 993 | 993 | 993 | 952 | 897 | 897 | 979 | 949 | 1336 | 1017 | 1011 |
1783 | NP1938A | 365 | 1630 | 1630 | 1448 | 1448 | 1448 | 1155 | 1694 | 1694 | 1327 | 1699 | 1017 | 2260 | 2254 |
1777 | NP6068A | 362 | 1624 | 1624 | 1442 | 1442 | 1442 | 1149 | 1688 | 1688 | 1321 | 1693 | 1011 | 2254 | 2260 |
294 symbols consensus M-P-----SE--AA-LL-Q-RWR-G--CP-CR-------GSY-VYQRYLCKNCDRTFNDK #oth 131333231134112113121113124112112222223111232111111212111112 HQ3552A -:-:::::--::--:--:-:---:-::--:--:::::::---:----------------- VNG0918 :M:IKTFV::RR::N::A:I:::N:VY::S::AESVIRY:::R:F::::::D:::::::Q VNG5149 :M:IKTFV::RR::N::A:I:::N:VY::S::AESVIRY:::R:F::::::D:::::::Q Hmu2397 -:-:::::--::--:--:-:---:-::--:--:::::::---:::::::::::G:::::: Hmu2618 -:-:::::--::--:--:-:---:-::--:--:::::::---:::::::::::G:::::: Hmu3363 -:-:::::--::--:--:-:---:-::--:--:::::::---:::::::::::G:::::: Hmu2991 -:-:::::--::--:--:-:---:-::--:--:::::::---:::::::::::G:::::: pNG4001 :I:LDVFG::SV::D::E:V:::D:VT::R::SDRTVRN:::REF::::::::::::::: rrnAC0972 :I:LDVFG::SV::D::E:V:::D:VT::R::SDRTVRN:::REF::::::::::::::: HVO_C0052 -:-:::::--::--:--:-:---:-::--:--:::::::---:----------------- HVO_C0064 :I:LDVFG::SL::D::Q:V:::D:VE::R::SDRTVRN:::GAF::::::::::::::: Hmu2617 -:-:::::--::--:--:-:---:-::--:--:::::::---:----------------- NP1938A :F:FELLS::AS::N::E:V:::E:LC::R::SESVIKH:::RE:::::::D:::::::: NP6068A :F:FELLS::AS::N::E:V:::E:LC::R::SESVIKH:::RE:::::::D:::::::: consensus TGTIFAHSKIALRKWLFAIYAFLRFNTSIRQLDAEIDVSYRTVRRRVEQFARTLDAPSIN #oth 121212122331332323314321211122123312422222341222213121111435 HQ3552A ------------------------------------------------------------ VNG0918 :::V:E::AV:::::FL:V:TYI:L:::::::::::::::K::Y:::QR:L:A::::RPH VNG5149 :::V:E::AV:::::FL:V:TYI:L:::::::::::::::K::Y:::QR:L:A::::RPH Hmu2397 :D:::::::LK:KE:Y:T::V::::::::::IE::L:C:::::::H:::::::::::::T Hmu2618 :D:::::::LK:KE:Y:T::V::::::::::IE::L:C:::::::H:::::::::::::T Hmu3363 :D:::::::LK:KE:Y:T::V::::::::::IE::L:C:::::::H:::::::::::::T Hmu2991 :D:::::::LK:KE:Y:T::V::::::::::IE::L:C:::::::H:::::::::::::T pNG4001 :::::::::::::R:::S::::::::::L:::QC::E:THK:MH::I:R:::A:::::L: rrnAC0972 :::::::::::::R:::S::::::::::L:::QC::E:THK:MH::I:R:::A:::::L: HVO_C0052 ---------------::S::::::::::L:::QR::G:T:K:MH::::R:T:A::::QLD HVO_C0064 :::::::::V:::::::S::::::::::L:::QR::G:T:K:MH::::R:T:A::::RLD Hmu2617 ---------------:::F:S::::::::H:::::LP::::SLW:::::::::::::A:S NP1938A :::::::A::G:D:L:::F:SL:::::::::::::::::::SL::::::::::::::A:: NP6068A :::::::A::G:D:L:::F:SL:::::::::::::::::::SL::::::::::::::A:: consensus LVGPVEIDEVYVSAGLKGRERDQESRSRGLSTRGRGSYDGDKPPVFTLVDRGTGERYVVP #oth 1311211212113..2..222.321.1.1.111...1132..1.112111.132212222 HQ3552A ------------M::E::LDQ:EP-:D:::-KK:::TFES:::::V:::R:SD:RVRFLV VNG0918 :E:::::::F::K::::::::::P::::::::::::T:AE::L:::V:A:::::::H:I: VNG5149 :E:::::::F::K::::::::::P::::::::::::T:AE::L:::V:A:::::::H:I: Hmu2397 :S::::::::::::::::::::::::::::::::::::::::::::::::::SD:::::: Hmu2618 :S::::::::::::::::::::::::::::::::::::::::::::::::::SD:::::: Hmu3363 :S::::::::::::::::::::::::::::::::::::::::::::::::::SD:::::: Hmu2991 :S::::::::::::::::::::::::::::::::::::::::::::::::::SD:::::: pNG4001 :::::::::::::::K::::::R:::::::::::::::SS::::I:IIA::::EQ:::I: rrnAC0972 :::::::::::::::K::::::R:::::::::::::::SS::::I:IIA::::EQ:::I: HVO_C0052 ::::::::::::::::::::::::::::::::::::::E::::::::I::::::Q::::: HVO_C0064 ::::::::::::::::::::::SW::::::::::::::E::::::::I::::::Q::A:: Hmu2617 ::::A::G::::T:::::H:H:::::::::::::::::::::::::::::::R::::::S NP1938A :::::::::F:::::K::::::R:::::A::K::::T:EE::::::::::::::Q::::: NP6068A :::::::::F:::::K:::K::R:::::A::K::::T:EE::::::::::::::Q::::: consensus AKSADESTVRLLLADHEEESLTVYTDGFRAYDPLEDDDAFTREYVVHGDGEYADGDVHVN #oth 112121222111232323111131..1211.1111112423123.112111.22111.11 HQ3552A REDLEDVDEDIVEYGD:DDLAILC::QYSI::GIDEH:EIDSHL:INH:DH:IV::A:T: VNG0918 ::A:T::RI::::::RQQ::::::::::::::::DE::::::::::::::::VN:::::: VNG5149 ::A:T::RI::::::RQQ::::::::::::::::DE::::::::::::::::VN:::::: Hmu2397 ::::::::::::::::::::::::::::::::::::::S:::K::::S:::::::E:::: Hmu2618 ::::::::::::::::::::::::::::::::::::::S:::K::::S:::::::E:::: Hmu3363 ::::::::::::::::::::::::::::::::::::::S:::K::::S:::::::E:::: Hmu2991 ::::::::::::::::::::::::::::::::::::::S:::K::::S:::::::E:::T pNG4001 ::A:::::I::::::RQQ:::::::::::::E::::::::D:::::::::::::DE:::: rrnAC0972 ::A:::::I::::::RQQ:::::::::::::E::::::::D:::::::::::::DE:::: HVO_C0052 ::::::::::::F::::::::::::::L::::::::::E:H::::::::::::::::::: HVO_C0064 ::::::::::::::::K:::::I::::::::::::::NE::::::::::::::::::::: Hmu2617 :::::::::::::G:C::::::S::::::::::::::EHYQ::A:I:SE:::V:::A::: NP1938A ::::::A::::::EN::K::::::::::::::::D::ED:H::S:I::::::V:::A::: NP6068A ::::::A::::::EN::K::::::::::::::::D::ED:H::S:I::::::V:::A::: consensus TCESHASLARRWLSPHRGVSKDKLTPYLRAFQLRRELFRKPGREALKHALNAAL #oth 311322134121122322211231241123131233441221422123346331 HQ3552A S::NRH:FL:N::RRF:::::HH:QG::NF:S:TLNTD:WF-E:I:STYFYT-- VNG0918 ::::::::::::::::::::::R:::::::::::::V:::::K::::TI:ET:: VNG5149 ::::::::::::::::::::::R:::::::::::::V:::::K::::TI:ET:: Hmu2397 G:::::::T::::::::::::::::::::::E:::::Y::::D::::::::::: Hmu2618 G:::::::T::::::::::::::::::::::E:::::Y::::D::::::::::: Hmu3363 G:::::::T::::::::::::::::::::::E:::::Y::::D::::::::::: Hmu2991 AARA----T::------------------------------------------- pNG4001 :::::::QV:::::::::I::::::Q:::::::::::::::::D:::::VQ:T: rrnAC0972 :::::::QV:::::::::I::::::Q:::::::::::::::::D:::::VQ:T: HVO_C0052 :::::::::::::::::::::::::Q::::::::S::::::::::::::VK:T: HVO_C0064 S::::::::::::::::::::::::Q::::::::S::::::::::::::VK:T: Hmu2617 :::E---------::KTN------------------------------------ NP1938A :::::::::::::::::::::::::A:::P:::::RIL:::::::::QIIREV: NP6068A :::::::::::::::::::::::::A:::P:::::RIL:::::::::QIIREV: