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6 genomes BUD1573 8 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0690

rrnAC1965

HVO_1983

HVO_B0200

Hbo2862

Hmu0879

- -

NP4430A

HQ1720A

Pairwise sequence scores
Consensus score3302 NP4430A HQ1720A HVO_B0200 HVO_1983 Hbo2862 rrnAC1965 rrnAC0690 Hmu0879
2658NP4430A 3320 2447 2456 2521 2575 2535 862 875
2872HQ1720A 2447 3336 2604 2588 2739 2728 836 880
2875HVO_B0200 2456 2604 3338 2629 2730 2763 899 957
2835HVO_1983 2521 2588 2629 3246 2672 2696 834 859
3011Hbo2862 2575 2739 2730 2672 3323 2844 895 941
2996rrnAC1965 2535 2728 2763 2696 2844 3329 840 911
934rrnAC0690 862 836 899 834 895 840 2641 1842
984Hmu0879 875 880 957 859 941 911 1842 2656

452 symbols
consensus       MS---RHYDREFVRTFFTSPTAVEGEDDSAKMLRSAAQLRGMQAPDVWVPDNEDATAPSM
#oth            1244113232321...1.2.1.242221...313113323.22...212..1..1...1.
NP4430A         :TLDK:TH::T:::::::T:::EK:VE::::K::::IE::::::::::::::::::::N:
HQ1720A         ::VE::::::::::::::::::::::::::::IQ:::::::LK:::::::::::::::::
HVO_B0200       ::SD::N:E::::::::::::::S::-N:::::Q::::::::::::T:I:::::::::::
HVO_1983        --:::-------::::::::::::::::::::::R::G::::::::::::::::::::::
Hbo2862         ::IK::::E::::::::::::::::::::::::::::::T::::::::::::::::::::
rrnAC1965       ::VT:::::::::::::::::::D::E:::::::::G::::L::::::::::::::::N:
rrnAC0690       --:::---MTRLC:::Q:A:A:IPND-N:::F:V:GLTSK:F::::WL:::I::G:::::
Hmu0879         --:::---MTRLC:::Q:A:A::PR:-N:::Y:D:GLTAE:FE:::WLA::I::G:::::

consensus       RDEGVENIIEVVAEHGADFPGEIHPRVVWHRDDPATRYQGFQQMLEIADPENGAVEHIDG
#oth            11.122.22222223121.2.1.2..21.2122142.13.2312231232321121111.
NP4430A         ::::A:::A:::::S:::::::::::::::::S:E:::::::H:::::::::::I:::::
HQ1720A         :::::::::S:::::::E::::::::M::::ER:T:::::::H::Q::N:D:::::::::
HVO_B0200       :A:::Q:LV:::S:::::::::::::::::::::S:::E::K:::::T::::::::::::
HVO_1983        ::::A:::V::IS:Q::E::::::::M:::::S:E:::::::H::D:T:::R::::::H:
Hbo2862         ::::::::V:::S:Y:::::::::::I:::::::::::::::H:::::::A:::I:::::
rrnAC1965       :A:::::::D:::NQ::E:::::::::::::ES:::::K::::::::T::::::::::::
rrnAC0690       K::A:D::::HIPD:AD::A:D:L:::E:AY::ANA:ER:IE:VTRL:EAVG---:EL::
Hmu0879         KA:AL::T:DRLP:Y:P::G:::W:::E:SYA::SF:ER:VD:IDRLVGEAG---D:L::

consensus       FVIPEVGDIDDWKKADEFITIVENEHGLEEGSLSMSVIVESGEAELAMGDLREEMGKPSN
#oth            1.2.1..221.122.2222122.212.121.113111.2.1141111311..31322241
NP4430A         :::::::::::::::::::::::::Y::::::IA::::I:::S::::::K:::::::AD:
HQ1720A         ::::::::::::::::::F::::::Y:::::::::::::::::::::L::::A:::::::
HVO_B0200       ::::::::L::::::::::::I:H::::D:::::::::I:::::::::S:::A:K:::::
HVO_1983        :::::::G::::::::::F::::H::::D::::A::::I:::::::::::::D:::::T:
Hbo2862         ::V:::::::::::::::::::::::::::::::::::::::A::::L::::T:::::A:
rrnAC1965       ::::::::::::::::::F::I:H::::::::::::::::::::::::::::::::::::
rrnAC0690       ::F:K::RL::VRD:AGV:ADA:RDA::P::T:E:AI:L:TAP---GRS::::ICQYATD
Hmu0879         V:V:K::RRT:VER:RSAVAEA:R:::YDD::IGL:::::TAR---:FS::::IARLGED

consensus       NLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGLIAVDGPYDDI---
#oth            111.121.11.2...1111112121.11.5.3211121.121...122111..1.11111
NP4430A         :::::::::::::::::::::I::::G::E:K::::::::A:::::::S:::::::::::
HQ1720A         :::::::::::::::S::::G::::::::S:::::::::::::::::::::::F::::::
HVO_B0200       :::::::::::Q:::::::::::::::::::A::::::::::::::C:::::::::::::
HVO_1983        ::::::::::::::::::::::::::::::::::::::::::::::CV::::::::::::
Hbo2862         :::::::::::::::::::::::::::::E:::::::::::::::::V::::::::::::
rrnAC1965       ::::M::::::::::::::::::::::::P::::::::::::::::::::::::::::::
rrnAC0690       --S::SG::F:P::::AELGGR:LD::R:R:DG:LEAL:NET:::DIV:IG::F:QLFHE
Hmu0879         --S::TG:IF:P::::AELGGRAMD::R:Q:AAMLERL:NE::::::L::G::F:QLFHE

consensus       ------RDVEGYRERMTDNRAKGMDGIWSLTPGQVVEANTSPLPPKTGSWLLEADDREIE
#oth            1111111122..3112441312.13.1.1.1.2.112..3311.1311211233225221
NP4430A         ::::::::::::HD:I:A:N:M::L::::::::::::::K:::::A::Y::ID::G::V:
HQ1720A         ::::::::I:::::::I:::::::I:::::::S:::::::E::::Q::::::T:G:TD::
HVO_B0200       ::::::::::::::::VE:::M::T:::A:::::::T::EA::::::::::::L::D:::
HVO_1983        :::::::::::::::::::Q::::L:::::::::::::::::::::::::::D::GE:V:
Hbo2862         :::::::::D::N::::E:Q::::I::::::::::::::K:::::::::::::V::::::
rrnAC1965       ::::::::::::::::K:::::::T:::::::::::::::A:::::::::::::GGQ:V:
rrnAC0690       RAGVTYYNA:::ADQVAYEATI:I::S:::H:K:TEQ::RIHM:T---------------
Hmu0879         RAGVTYYNAP::ADQV:REATI:I::S:::H:K:T:Q::RIHM:T---------------

consensus       LEAEDGKQVYDGDRLSL-EETDGGYVLRVGGDE-ELD-ADELREELLDLTAYVPSMDDIV
#oth            133421333131153312345133231532234632313111442113324121112111
NP4430A         ::S:::VE::S:::IE::::E::::E:E::ST:IFCESEE::AD:::::VD:::::::::
HQ1720A         ::QTN::HI::::SV::SV:D:DTHH:V::S::HT:::R::::S:::KM:::::::::::
HVO_B0200       :D::::R::::::E:::EQVG:DS:::::D:E:Q:::::E::H:::::::T:::::::::
HVO_1983        :AS:::VEA::::::::::A:::::E::::::AR::T::::::::::G::S:::::::::
Hbo2862         :::A::::I:N::KVR:::T::S::::HT::ETT::::E:D::KK:::M:::::::::::
rrnAC1965       :::Q:::::::::D:::E:VS::::::QA:::RL::::E:::T:::::R:::I:::T:::
rrnAC0690       -----------------:---------------:---:VE:MERD:--------------
Hmu0879         -----------------:---------------:---::E::ERD--------------:

consensus       DSMEEFEAAKEAGKGAIAMTQAATLVIDGVEIDIEKDRMWDEATYQAAMTPIALFQDVYE
#oth            211.2.21..21.3..111122212222.222123311.1.....11221113111111.
NP4430A         ::::::::::::::::::::R:::IE::::QV:VSS:::::::::::L:::VK:::::::
HQ1720A         :::::::::::::::::::::S:::::::::::::T::::::::::::::::::::::::
HVO_B0200       ::::::::::::::::::::::T::::::::V::A::::::::::::::::V::::::::
HVO_1983        :::::::::::::R:::::::S:::R:G:T::::::::::::::::::::::S:::::::
Hbo2862         :::::::::::::::::::::ST:::::::::::::::::::::::::Q:::T:::::::
rrnAC1965       :::::::::::::::::::::::::::N:::V::S:::::::::::::Q:::T:::::::
rrnAC0690       HKI:S:NE::RE:T::V--------:V::--------Q:V:::::KNFANTVKTVRAID:
Hmu0879         GKI:R:VE::AE:S::V--------:L::--------Q:V:::::KNFANTV:TVRAID:

consensus       HRPDQHEELAERYGADIVERATAVGN------
#oth            3112.1232223.231212..34.12322111
NP4430A         N:::::DD::DL:SE:V::::IE:::::::::
HQ1720A         ::T:::D::ED:::::V:N:::Q:::::::::
HVO_B0200       ::::::DA:E:M::EG:::::M:::TDD::::
HVO_1983        N::::::::E:::::GV::::ME::L::::::
Hbo2862         :::::::::::M::::::::::N:::::::::
rrnAC1965       :::::::::::M::::::::::::::::::::
rrnAC0690       TH:A:T:AY---:DD:LLA::RD:ELIFG:::
Hmu0879         AH:E:T---:D::DG:L::::R::ELGFEGST