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6 genomes BUD1575 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1948

HVO_0617

Hbo0903

Hmu0523

- -

NP0154A

HQ1331A

Pairwise sequence scores
Consensus score1110 HQ1331A HVO_0617 Hbo0903 NP0154A rrnAC1948 Hmu0523
494HQ1331A 1964 272 381 262 273 260
628HVO_0617 272 1406 437 447 377 428
721Hbo0903 381 437 1387 424 410 420
671NP0154A 262 447 424 1135 445 447
686rrnAC1948 273 377 410 445 984 514
657Hmu0523 260 428 420 447 514 1081

292 symbols
consensus       ------------------D-RT---ADDRAVSPVVGKALEAGIVVLFLALVTTSLYGGVV
#oth            111111121122222234342344444312431122123232112122122.1312.122
HQ1331A         :::::::::::::::MSG:R:RDMNS:::GI:::A::T::L::G:ILI::I::::L:::T
HVO_0617        VADASEPSSVAPDDSGPVTPG:GGR:AE:::V:::::::::A:::::VG:L::V:F::::
Hbo0903         :::::::VSVRRRWCGQR:G::PKGRT:::L:::::::::L::::::I:::::TF::D:I
NP0154A         :::::::::::::::::MRD:CVPP::R::M:::::::M::TL:::Y:GI::AA::::A:
rrnAC1948       ::::::::::::::::::-:--:::---------------M:::L:Y:G::::T::::T:
Hmu0523         ::::::::::::::::::-:--:::VN::::T:::E:TITI:L:A::::G:::::F::A:

consensus       PAYRAAAGTELADRTLADAAARVEQA--VPPDAAAADRRVRVSLPATIRGSGYRVRADGD
#oth            .321311141211.222411331.42122123243332133141.32.2143.2232334
HQ1331A         :G:QS:V:I:I:::VVINV:D:I:STADGTA:TLT::::I::TV:QN::QKP:::I:NTT
HVO_0617        :DH:::V:H::::::::A:TEQ::TTAV::ES:VRGS:::DAA::RA::::S::IAYVPN
Hbo0903         :G::TT:AA:V:E::VV::::S::D:::::ERTHRI::::A:::::::::DP::L::TSP
NP0154A         :E::::::::::E:AA::::TDI:RS::I:::V:::ET:TV:E::P::A:EA:::E::::
rrnAC1948       :::QS:V::::G:::::E:T:::::::::::::R:VSTT:::::::::D:A::S::T:::
Hmu0523         ::A:D:::GSIG:::::T:TE:::::::I::NV:NVTV:E::R::::::::::AIE:::R

consensus       A-----------ALVLDHPDPAIGGRTPLSLPDRVVAVSGSWQSGSESVV----------
#oth            13331211111131212..22223213434213224313.314.2333121111111111
HQ1331A         :DKT::::::::HIR:Q::::::SAS:HI-VSHNLIT:T::IR:ETP:WIRLQAHTAISN
HVO_0617        :TLATDPNVTAP:::::::ND:FDR:L:VT:::S:-S:::A:D::NDC::R:::::::::
Hbo0903         :NESTT::::::::::E:::EGV:::VT::F:V:E:::::T:::T:::WA::::::::::
NP0154A         -:::::::::::R:AV:::N:G:EASV:::::::::::D:T:N::DRT:A::::::::::
rrnAC1948       -::::::::::::::::::::E:::::QPL:::::DTLE:E:::::PT::::::::::::
Hmu0523         -:::::::::::S::::::E::V:::SR:VV:PS:QR:::::E::::L::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
HQ1331A         NRSRSAIGSMGTITRMSMDLSPNENMNLDNKSRTNINTIQAVDMNGSSDSISGISNPMRM
HVO_0617        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo0903         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP0154A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC1948       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu0523         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ----------------VVSDDRGGITVTLENGR-------------------
#oth            1111111111111111213325233324.44224322222222222221111
HQ1331A         HSGDVINDILNTGTEEIS:::FVK::II:TDESDEIESTEINTTSNYMQIHS
HVO_0617        ::::::::::::::::::V::DD:T:LE:A:::ADA::::::::::::::::
Hbo0903         :::::::::::::::::::N:G:R:V:::::::NAASGVVNAVAGGAP::::
NP0154A         ::::::::::::::::::TTTED:LE:Q:S---:::::::::::::::::::
rrnAC1948       ::::::::::::::::A::GT::SV:::::AE::::::::::::::::::::
Hmu0523         ::::::::::::::::::RTAN::LS:A:QE::P::::::::::::::::::