Home |  Text search
6 genomes BUD1579 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2083

HVO_1986

Hbo1855

Hmu0043

- -

NP0746A

HQ3092A

Pairwise sequence scores
Consensus score1879 rrnAC2083 Hmu0043 NP0746A HQ3092A HVO_1986 Hbo1855
1471rrnAC2083 1895 1659 1300 1268 1304 1310
1457Hmu0043 1659 1874 1311 1250 1267 1297
1487NP0746A 1300 1311 2007 1359 1362 1355
1603HQ3092A 1268 1250 1359 1890 1561 1545
1648HVO_1986 1304 1267 1362 1561 1928 1689
1649Hbo1855 1310 1297 1355 1545 1689 1877

271 symbols
consensus       ------TNADA----------TGFLTLLRREILRFVRRPRNTFLPPFITNVLYFSVFGVI
#oth            11223322534111111111111132.11..2...1...1...3..2...2...1....1
rrnAC2083       ::::::M:QNT:::::::::::Q::::V:::::::::::Y::::::I:::A:::::::::
Hmu0043         ::::::V:RT::::::::::::QL:::V:::V:::::::Y::::::I:::A:::A:::::
NP0746A         MSGDAA:D:::GRAGPGGVFGV::RS:::::::::::::::::A::A:::::::A:::::
HQ3092A         ::::MS:DI:L:::::::::::::I::::::T:::I:::::::I::::::I::::::::V
HVO_1986        MSLTSL:SL:V:::::::::::::YA:::::::::::::::::V::::::::::::::::
Hbo1855         ::::::VSVER::::::::::::::A::K::V:::::::::::V::::::::::::::::

consensus       LGERINEIAGVPYILFILPGLVVLGAISNAFENASFSIFHGRWNRYIEEVLTSPLSYRSM
#oth            ..2..22...12.12.2....1....1.11......1.......2..2122.1.1.22.1
rrnAC2083       ::S::G:::::S:LQ:V:::::::::::DS::::::T:::::::D::QA:::::M:N:::
Hmu0043         ::S::G:::::S::Q:V:::::::::::DS::::::T:::::::E::QA:T:::M:H::V
NP0746A         ::Q::DD:::FD::V:L:::::::::::::::::::::::::::E::H:T::A::::S::
HQ3092A         ::::::L::::::::::::::::::::::::::::::::::::::::::AI:::::::::
HVO_1986        :::::::::::::::::::::I::::V::::::::::::::::::::::A:::::::T::
Hbo1855         :::::::::::::::::::::I::::V:::::::::::::::::::::::::::::::::

consensus       VAAYVLASALRGIIVGLLIAGIGLFFTSVGVAQPLYLAAFMLVITLLFAGLGVIGGLWAD
#oth            .3...211.1..1311211131.22..3.2.24.2..21.421121..12...2...1.2
rrnAC2083       :::::S::::::VVTS:::V:V::I::P:P::N:V::VS:L::::T::G::::::::::S
Hmu0043         :::::S:::::::VTS:::V:V::V::::S::H::::I::V::::T::G::::::::::S
NP0746A         :L:::F:A:::::::::I:VAV::V::T:P:NE::::::::V:VP::::S:::::::V:E
HQ3092A         :I::::S:::::V:::I:V:L::A:::A::::::V:::::GII:S::::A:::A::::::
HVO_1986        :G::::S::T::VL::A:V:L::A::::::::::F::V::I::::::::::::V::::::
Hbo1855         :G::::S::T:::F::A:V:V::V:::T:::VR:F::I:::::::::::S:::V:::::E

consensus       DFDDLTMMNQFILRPLVFFGAVFYSLNELPALLRQVSLLNPMIYMVNGVRYGFLGVTEVD
#oth            ...1..1.............1.....121.233122..1...1.......1.11.12.11
rrnAC2083       :::Y::V:::::::::::::::::::EV:::FW:N:::::::V:::::::::MI::::I:
Hmu0043         :::Y::V:::::::::::::::::::EV::P:W:T:::F:::V:::::::::MI::::IE
NP0746A         ::::::V:::::::::::::::::::EI::P:Y:TL::::::V::::::::::::YQ:::
HQ3092A         ::::::::::::::::::::G:::::::::LI:Q::::::::::::::::F:::::S:::
HVO_1986        ::::::::::::::::::::G:::::::I::TFQ:A::::::::::::::::::::::::
Hbo1855         ::::::::::::::::::::G::::::::::T:Q::::::::::::::::::::::S:::

consensus       PNTSLAVLTGLTVAVLALDIALFRRGYGLTD
#oth            .24..3..212133.343133..1.....21
rrnAC2083       ::::::::::T::V::SI:YM::::::::AE
Hmu0043         :T:::L::::AA:::::V:L:::K::::::E
NP0746A         :LA:::::S:::A::IV:::Y::K:::::I:
HQ3092A         :TQ::I::V:::GI:VIG::V:::::::::E
HVO_1986        ::L::G:::A::LG:VG:NVV::::::::::
Hbo1855         ::M:::::VA:::::S:VNV:::::::::::