|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 1927 | VNG0428 | NP3434A | hla2217 | HQ2394A | HVO_1387 | Hbo0163 |
1414 | VNG0428 | 1890 | 1192 | 1294 | 1205 | 1247 | 1235 |
1383 | NP3434A | 1192 | 1891 | 1320 | 1132 | 1195 | 1213 |
1519 | hla2217 | 1294 | 1320 | 1906 | 1188 | 1294 | 1343 |
1500 | HQ2394A | 1205 | 1132 | 1188 | 1941 | 1314 | 1435 |
1603 | HVO_1387 | 1247 | 1195 | 1294 | 1314 | 1955 | 1451 |
1650 | Hbo0163 | 1235 | 1213 | 1343 | 1435 | 1451 | 1940 |
260 symbols consensus MSWDTVRLDWDD--DVATITIDRPEQLNALNVATLDALEEALAEAEADGARALVLTGAGD #oth 1421124.22111131..2112..221...1231.211222124.2342..21.3111.1 VNG0428 -MS:::A:AV::::G::::::S::DS:::::::::H::RDT:DT::SE::::V:::S::: NP3434A :E:E::S:E:N:::SI::V:V::::A::::::E::E::A::I:A:::GD::V:::A:::: hla2217 :T:::ID::I::DS::::::V:::::::::T:D::E:I:::::D:::A::::::FA:::: HQ2394A :GAEP:T:::::::N:::::VN::K:M::::E:A::L::TH:RS:AD:D::C::I::::E HVO_1387 :::::L:::::G::::::::::::::M::::AD::::::D::D::::::::VV::::::: Hbo0163 :::::I::::::::::::LV::::D:M:::::Q::::I:::::::GEKE::C::V::E:: consensus EAFIAGADISYMKDLGTPAAQAYAEQGHRIADAIESFPAPTVAAINGYAFGGGCELALAC #oth 2..1.....31.3232121..212.1..21.331.2..1121..11.1.....2.2.1.. VNG0428 D:::::::::::VEMD:AE::::::L::SV::::::::::V::::D:::::::M:::::: NP3434A D::::::::K:::::S::E:::WG:L::DV:::L:Q::GA::::VD:::::::::M:M:: hla2217 :::V::::::::VE:S::E::::::L:::V:::::::::::::::D:H:::::S:::::: HQ2394A K::V:::::ER:QSF::E:::Q:T:::::::NM:::::::A:::V::::::::::::::: HVO_1387 :::::::::G::::I::::::N:::::::::TRL:G:::::::::::::::::M:F:::: Hbo0163 :::V::::::::T:::PA:::::::::::::ST::::::::I::V::::::::::::::: consensus DLRVASERALLGQTEIDLGIIPGWGGTQRLPALVGDETARRMIFFGERIDASDAAERGLV #oth .1.1.1.2.22.1....1..1.....11..111..1.3.1.1111.1.21.32.424.12 VNG0428 :::::::D:I:::::::I:::::::::::::RI::::::::::Y::D:LS:A::S:H::: NP3434A :F:I:::S::I:N::::::::::::::::::R:::E:::K::::L:::L::ET::AE::F hla2217 :::::A:S:VI:::::::::::::::::::SR:::::::K:LV:L:::::::E::DI::: HQ2394A :::::::::VF::::::::::::::::::::::::::M:::::Y:::::::T::Y::::I HVO_1387 ::::::::::::::::::::M:::::SV:::::::::V:::L::::::::::::H:Y:I: Hbo0163 :::::::::::::::::::::::::::::::::::::L::::::::::V::T::F::::: consensus GEVVAHDELDDHIAELAAELAAKPAFALRAAKEAINAAHDAPRSAGLEFEARAWSGLFGT #oth ....221332311322321..11.24.121..3.113324323321.23.2.211....1 VNG0428 ::::PAA:I:::V:S::RD:::Q::A:M::::D:::TS:ETTL:::::::::T:A::::S NP3434A ::::SD::V:NR:E:F:::::S:::V::K:::Q::EQR:GT---G::DY:K::FA::::: hla2217 :::::D:AF::R:D::SR:::::::::M::::::L:::R:GTQAG::AL:R::::::::: HQ2394A :::::::D:TE::S::T::::::::T:M::::::L:T:YS::::T:::Y:::T::::::: HVO_1387 :::::::Q::S:VED:V:D::S::RH::AG::A:::MS:::::D:A:D::::V::::::: Hbo0163 :::::::::R::V::M:E::::::K:::::::::L::F:NS:::TA::H::::::::::: consensus HDQREGMAAFLEDRDPDFE- #oth 1..1...5..111.211..1 VNG0428 :::Q:::Q:::::::::::: NP3434A :::::::K::V:::T:E::: hla2217 ::::::::::::K:E::::: HQ2394A A::::::S::::::::E::S HVO_1387 :::::::E:::DK::::::: Hbo0163 :::::::N::V:K::A::::