|
Pairwise sequence scores | |||||||
---|---|---|---|---|---|---|---|
Consensus score | 1617 | VNG0729 | hla0158 | NP0514A | HQ1453A | HVO_0547 | Hbo0985 |
803 | VNG0729 | 1585 | 648 | 438 | 515 | 630 | 591 |
1078 | hla0158 | 648 | 2041 | 523 | 639 | 754 | 773 |
808 | NP0514A | 438 | 523 | 1579 | 501 | 583 | 637 |
925 | HQ1453A | 515 | 639 | 501 | 2062 | 646 | 853 |
1072 | HVO_0547 | 630 | 754 | 583 | 646 | 1668 | 877 |
1124 | Hbo0985 | 591 | 773 | 637 | 853 | 877 | 1829 |
333 symbols consensus --MELTTA------GRYRVL-GRPRD----------PDELLLV-------ELPD--VD-T #oth 11143.12111111211..22132321111111111332112211111112223443243 VNG0729 :::QT:::::::::SQ::::::DAP:::::::::::R:G::VL:::::::----::--:- hla0158 ::::P::S::::::::F::HDR:::PDIDGTGPADP:E:FV:::::::::DY:EAPI:P: NP0514A MQGAP:A:VTDDER::::::P::ND:::::::::::ERQ::A::::::::----::--:- HQ1453A :::G:::T::::::A:::::::Y:HE:::::::::::TQ:V:IACDETDE::Q:SS:NAD HVO_0547 ::::V:::::::::::F::Y:RS:::::::::::::G:::::L:::::::::::ER::W: Hbo0985 :::D:::::::::::::::::::::::::::::::::E:::::::::::::::ADGM:DA consensus APE------------------------DA--FEPLYVDATGYDGALAAAVAALDPGNVVD #oth 2233311221111111111111111111311231222333332333432.32232.2212 VNG0729 ---:::::::::::::::::::::::::RADY:::R:TTGDAE:::DDT::::R::YL:: hla0158 ::DAG:::::::::::::::::::::::R:::D:::AA:E::::DM:DR::S:E::F::: NP0514A ---:::::::::::::::::::::::::G::S:VVA:P::--------:::TA:V::::A HQ1453A :H:TDTDDNNMMIDEETSQHNANAVSI:K:::::V:I:ISAH:T:IQS::DT:AA:YLIE HVO_0547 D:AVETDAD::::::::::::::::::::::YS:T::PR:::::D:E:R:S::E:::EIE Hbo0985 D::::::::::::::::::::::::::E::::A:T::::::::DG:::::GSI:A::::: consensus ATLAWTDGDPRFADVDVVAETRFRFARDVTGMFEAARDTWARARADGEAMGSRVTRGTDG #oth .2.4.4224122431314321312.3333312....432254153311122213.321.2 VNG0729 :::::N:::A::T:::IQRR:LLT:::G:S:L::::L::M:D:HEN:VGVTG:P:FN::N hla0158 ::::::::SA:::::E::R:S:::::D::D::::::V:A:DQI:SA:::V::IT::SN:: NP0514A :G:G:ETEP:AVR::T:ETA:::::E:TTEA::::::NCFE::Q::::::N::::H:::: HQ1453A :::K::ADG:QI:A::II:::E:I:YE:I::I::::TS::NN:V:E::G::::L:::::A HVO_0547 :::R:D::::::EELS:RDR:::::VGAA::L:::::E::-::TG::::I:::::Y:::: Hbo0985 :D:T:H::T:::DTLS:::::T:T::DG::::::::KS::MV:E:EN:G:NA::::S::: consensus DPNGALYVFAKQPGARDLFAEFRDGRLPLEPLVARLDEEEAA------------------ #oth 2..111.3..312.2212141223.34.21..22.3224343111111111111111111 VNG0729 E::::V:A::Q:::E::I:T:I:T::::I::::D::::DA:D:::::::::::::::::: hla0158 E::::::L::DA::S-:A::DL:S::::I::::::VN:SRED:::::::::::::::::: NP0514A ::::VV:T::E:::EQ:::::::::TK::::::::AADG:TP:::::::::::::::::: HQ1453A K:::::::::::Q:::N:IR::QT:IT:::::IR:I:::::::::::::::::::::::: HVO_0547 :::AV::::::::::::::D::G::VV:VD::LD:::D:TD::::::::::::::::::: Hbo0985 ::::::::::::S::::::S:::N:IM:::::IR:V:GH:NSTLMDQPADHRSTECSESG consensus -----------DQPREVFVLRPADEEFVAVYIVFDRDGLLAQTVRDTY--------C-DG #oth 111222111123312211122.3333.23.121221112114.212..111111113423 VNG0729 :::::::::::--AH::::FD:L:H::TI::L:AH::SV::D::::::D::::::::PRP hla0158 ::::::::::::G::::::::::AHD:::::V::::E:V:::::::::DLGPGLAAGL:: NP0514A :::::::::::--:FS:W::D:-EPP:::::::L:P::::E::M:E::::::::::LG:: HQ1453A :::SVSVPPEST:::A::I:E::TKS::I::V::R:::M::G:LHS::::::::::GE:A HVO_0547 ::::::::::P:A:::M:::::L:::::L:A:AL::E::F:R:M::::::::::::::-- Hbo0985 ESDRIDVPPEPE:::A:::M::T::P:IV:::::::::M::K::::::::::::::V:-- consensus G--DN---------------------------- #oth 344334333222122122221221111111111 VNG0729 PET:RD::::::::::::::::::::::::::: hla0158 :AL:AAKAGSDGAEDGADERDDGKDGFDALDRL NP0514A :LAE:IEQKQ::::::::::::::::::::::: HQ1453A NGGA:NHDRSKTAPSGPLRFDQSK::::::::: HVO_0547 -::--:::::::::::::::::::::::::::: Hbo0985 -::--::::::::::::::::::::::::::::