| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 3142 | HQ2196A | rrnAC0825 | rrnB0204 | HQ2963A | HVO_2802 | Hbo2534 | hla1160 | NP4134A |
| 1686 | HQ2196A | 3233 | 1254 | 1341 | 1423 | 1447 | 1460 | 1191 | 1204 |
| 1728 | rrnAC0825 | 1254 | 3367 | 1446 | 1383 | 1395 | 1389 | 1328 | 1370 |
| 1696 | rrnB0204 | 1341 | 1446 | 3189 | 1353 | 1255 | 1335 | 1398 | 1499 |
| 2412 | HQ2963A | 1423 | 1383 | 1353 | 3543 | 2475 | 2644 | 1445 | 1459 |
| 2430 | HVO_2802 | 1447 | 1395 | 1255 | 2475 | 3333 | 2781 | 1398 | 1437 |
| 2485 | Hbo2534 | 1460 | 1389 | 1335 | 2644 | 2781 | 3408 | 1362 | 1442 |
| 1803 | hla1160 | 1191 | 1328 | 1398 | 1445 | 1398 | 1362 | 3235 | 1918 |
| 1865 | NP4134A | 1204 | 1370 | 1499 | 1459 | 1437 | 1442 | 1918 | 3193 |
539 symbols consensus ---------MSVP------------------------DSLTARLPG---G----DLGLII #oth 122222322454421111111111111111111111123443144211133434.33223 HQ2196A ::::::::::::QD::::::::::::::::::::::::PIAN:::DSLV:YWES::VK:G rrnAC0825 MAAIGTDPGLR::RAHRRLAVAPVRYLRGGVDSMSAV:TVRN::DA:::L:::P:V::VV rrnB0204 :::::::::-MST::::::::::::::::::::::::G::Q::AE::::WLGNN:VR:L: HQ2963A ::::::MSTTTL:::::::::::::::::::::::::::::R:V:::::::::::A:I:: HVO_2802 ::::::::::::R:::::::::::::::::::::::::DF:::I:::::::::::A:::V Hbo2534 ::::::::::::R:::::::::::::::::::::::::D:A::M:::::::::::T:::V hla1160 MSDASSPSTDEP:::::::::::::::::::::::::E:A::A:ID:::AARQS::::V: NP4134A :::::::::--MS:::::::::::::::::::::::::::LG:IG::::ALEER::L:VL consensus ATLLATYLAYVLAGVGLGYS--LRGQLNTIARLTFLIGVFAMLALALNLHWGYTGLFNIG #oth 23224223233254353.35111324223223111123411231.11..1...2....1. HQ2196A :::A:V::L:LI::LL:::G:::S::::SLR::::::VLYSIG::VV::::::S:::::: rrnAC0825 :FIASIWAVMLVLAIAV:GANWANLAAGF:GSV:V:::GY:I:::::::Q:::::::::: rrnB0204 :LA::IGGL:A:FS:V::FQ:::N:TV::LR:VA::SAIY:::::::::Q:::A::::L: HQ2963A :::A::::::::I:I::::::::::::::::V:::Y:::::::::::::::::::::::: HVO_2802 LV::G::::::::::V:::T::::::::S::T:::Y:::::::S:::::::::::::::: Hbo2534 :V::V::A::::V::::::::::::::::::V:::Y:::::::::::::::::::::::: hla1160 G:::LV:::AT:LTFTD:--:::NSVVGLMRT::::GL:Y:LA::::::Q:::A:::::: NP4134A L::GLV:VLFA:SVLDQ:--:::GSIVS:L::V:::SLS::LV::::::::::::::::: consensus IVGFMAVGVYTMAILTRPVDPAGGAAQ--GLGLPLPVGIIAGMLAAALLGLLAALPALRL #oth 211..12.2.1123222133534135322.1..1121112112421222.223...11.. HQ2196A V::::::::::TT::::::AGQNPTGTLS::::S:::A:VG:V:::::V:YI::::S::: rrnAC0825 :A::::::A::T:V::A:T:::A::VP::::::::W::L:G::AM::II:G::::::::: rrnB0204 AA::::I:::::G:::A::TASPP---:::F::::::A:VGAI:VTGII:G::::::I:: HQ2963A ::::::::I:V::LVSK::YQ::::S:VG:::::VII::::::I::S:::::I::::::: HVO_2802 ::::::::::VT::V:K:TYV::::::VG::::::W:::L:::T:::::::VV::::::: Hbo2534 ::::::::::V::LFSK:AYTP:::::VG::::::II::::::V:::::::VV::::::: hla1160 VA::::L:::::G:VV:SP:::F:PP-:::F::::::::V::::V::VV::::::::::: NP4134A V:A::M:::::::M::::P:::F::P-::::::::W:::L::VAV::I::::T::::::: consensus RADYLAIVTIAMSEIVRLSFLSGELQQFQLFGVRVGTGGGSGLIL--DPQNPIRALFRTD #oth 11..1....2121..1.243523413335242443.1.1121242113343124522763 HQ2196A :D::F::::L:FA::I:IAVKAS:::E:TI::ATI:::::R:IRT::-YP:::NQF:E-- rrnAC0825 K::::::::V:F:::I::VVNWNG:AEVS::::PF::::AT:ISF::KSA:EVASTLIN- rrnB0204 :::::::::V:F::::::TLRAP:FANTRIA::AF::::AT::S:::-:S::::I::Y:: HQ2963A :::::::::::::::::F:::::Q::::N:A:R:::F:::::::::::YTD:LESF:SFF HVO_2802 :::::::::::::::::F::::::::::::::N:::F:::::::::::FSP:LE::L:GV Hbo2534 :::::::::::::::::F:::::D::::::L:N:::F:::::::::::FTD:LQ:::QSV hla1160 K::::::::LG::::I::FLQ:STFDT:LRDTLG::::::R:MG:::-::::::E::LV: NP4134A :::::::::LGL::::::TIA::DFNEWLIEN:GA:::SATS:TFTVS::T:::G:YF:: consensus ---------GLGAAYLGA--VDALGII-----KPVVDGLTYGLVLLLFVGAFYWLLKRIG #oth 11221231212153433511414232522311424242121234.342133423223.22 HQ2196A ::::::::::T::PI---:::::VSSTID:::G:L:S:W:FV:T:T:VLVCVL::II::V rrnAC0825 ::::::::::V:QPLVT:::AEGV:VS:::::G:NLAN::::IL:::V:A:S::V:A::T rrnB0204 PATTAPAPNA::::IFS::::EP:::E:::::ETL:I:WA:VI::C:CL:LL:C:MI::: HQ2963A :::::::::::WD::::L::IETF:::IPNNP:::::::V::V:::S:::LYF:::::T: HVO_2802 :::::::::::WNG:::F:::::FQVLVPRNP:::::::V:::L::G::AG:::::::T: Hbo2534 :::::::::::WG::::F:::::FTV:VPTNP:::::::V:::I:::::::YF:::::T: hla1160 ::GQAGTPTA::DLAF:TFGE:G:::A:::::NTIIIDWA:IA::AA::I:::V::E:L: NP4134A ::::AGDPTA::T:VF:V::T:D:::S:::::QSA:VDW::I:A:AVVLI:V:LF:E:L: consensus ESPFGRVLKAIREDEDVANSLGKDTRRFKIKSFMIGCALMGLAGILWRGSQGAVSPN--Q #oth 3.....2..2..1.151141...12353..13.21..111.1311214354.222.4214 HQ2196A :::::::::G::D::EATTA:::N:GSL::R::::::GIL:FL::I:Q::::YI::G::L rrnAC0825 N::::::::::::::T:TQ::::::::::::T::::::::::::V:F::QA:Y:::Q::: rrnB0204 K::::::::S::::QQ:TQA::::::L::::T:AL:::::::IA:F::L:G:YA::R::M HQ2963A :::::::::::::::EA:S::::::NG::::A::L::::::::::::FMRS:::T::::T HVO_2802 :::::::::::::::::::A:::N:D::::::::L::::::::::::LVP::::T::::F Hbo2534 :::::::::::::::::::::::::NQ:::::::L::::::::::F:LMT::::T::::F hla1160 R:::::M::::::::L::D::::NVDLI:::V:V:::::::::::::F::::N:::TP:: NP4134A R:::::I::::::::V::S:::::I:MA:::V:V::::::::G::::Y:AE::AN:QAMT consensus FRPRITFFIFIALIIGGAGSNTGSVLGGAVFAALLFQGPRYLGNLVRDVLP-DADAPSNF #oth 14.54..1111.111..2..11.112.213.2331131.324344245425144531332 HQ2196A :V:QL::::W::V:::::::::::II:SIL:VGTIYL::G:VRR:IEKFIS:LSGQAT:: rrnAC0825 :::T:::YV:A::::::S::::::II:A:T:SG:::YL:AR::EN:S--:G:GTR::::I rrnB0204 :K:IQ::Y:::::F:::T::P:::IV:::L::S:::E::SFIRRV:AEY:Q:LSN::DTL HQ2963A ::::::::VW:::::::::::::::::::I:::::Y::::::K::LDT::::S:SS::S: HVO_2802 ::::V::::W:::::::::::::::::::::::V:Y:::::FQ:::SA:F::NF:S::G: Hbo2534 ::::V:::VW:::::::::::::::::::::::V:Y:::::FK::IDT::::ST::::G: hla1160 :M:VL::YV:::V::::S:::A:A::::I:::TV::E:::RV:SSL:::I-:::ET::S: NP4134A YS:LY::Y::::V:V:::::::::::::I:::SF::E:::RA:GF:::RIAA:V:T:E:: consensus GDAIAPL-SNLDPTPLLAYTVDN--IRALQLVLLGLVLIWLMHRRPDGLLGHRKETASSI #oth 34.23412253.342222.232411223.12233.22.1212212.1.21.3.513.241 HQ2196A P::LGM:AGG-:VSGI:L::L:Q::TS::RVI:T:IL::::LK::::::F:N:R:M:::: rrnAC0825 V::::G::GS:::L::::::IS:::VST:RF::I:V:::YIIQNQ::::::::N:P:T:V rrnB0204 VS:L:E::GT::V::::::S:QDVS:S::R:M:::I::VY::Q:H:::::::::AI:::V HQ2963A :P:::::I::::I::::F::I::::::Q::::FM:V:::::::N::E::::::T::::P: HVO_2802 :Q::S::I:QF::V:F:L::::S::::Q::::VM:::::::::N::E:M::Y::::::V: Hbo2534 :Q:VG::I::I::A::FF::::S::::Q::::IM:::::::::N::E:M::Y::::::G: hla1160 A:::VT::---:::AF:::AT:::::AP::F:F:::I:VFI:::::::I::D:I:::AAV NP4134A AE:V::F::S::F::FI::AT:E:::A:::F::::::::FI::::::::::::V::::AV consensus DLS----------------------------SQAADGG-----------------EDNE #oth 4131111111111111111111122232344564421111111121232323212342. HQ2196A :IE::::::::::::::::::::SRVRDRQS:D:T::::::::::::::::::::--R: rrnAC0825 S:D:::::::::::::::::::::::::::RP:SGS::::::::::::::::::::A:: rrnB0204 A::::::::::::::::::::::::::::::-:Q:TRE:::::::::::::::::D::: HQ2963A T::APIAQTVASESRSTTADADTDPDPDATEDI:P::::::::SNSTTDSNNGGINS:: HVO_2802 P:::::::::::::::::::::::::::RPK:M::::::::::::::VDAAAEGG:TD: Hbo2534 P:T:::::::::::::::::::::::AAHARKT:T:::EHTDESPSPSNVASEGG:S:: hla1160 :::::::::::::::::::::::::::::::-ERPS::::::::::::::::::::TD: NP4134A :::::::::::::::::::::::::::::::ERPET:::::::::::::::::::D:::