Home |  Text search
6 genomes BUD1604 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0830

HVO_2798

Hbo2530

- -

hla1167

NP4140A

HQ2969A

Pairwise sequence scores
Consensus score3323 HQ2969A HVO_2798 Hbo2530 rrnAC0830 hla1167 NP4140A
2764HQ2969A 3390 2640 2629 1691 1285 1564
2767HVO_2798 2640 3258 2750 1597 1225 1553
2740Hbo2530 2629 2750 3276 1582 1214 1514
1981rrnAC0830 1691 1597 1582 3431 1380 1654
1597hla1167 1285 1225 1214 1380 2716 1744
1899NP4140A 1564 1553 1514 1654 1744 3270

479 symbols
consensus       MARDINRRDFLKRAGAAGAVGL-AGLAGCI----GGDGGGGGDG--G--------SG---
#oth            .31214..21.122..12431313111..32111213.1211213212332222211232
HQ2969A         :::::E::A:::::::::VL:T:V::S::V::::::-::E::E:ES:GSDSTETE::GST
HVO_2798        :V:::V::::::GV:::::A:::T::S:::::::::-:::::--::-::::::::--:::
Hbo2530         :::::A:::::::::::S:::A::::S::::::::SP:::::--::-::::::::--:::
rrnAC0830       :SS:T:::A::::T::VTT:::LG:::::STEQT:::::D::::GD:GMTGTGTE::GDS
hla1167         :T:R:Q:::V:RG:::::I---::AI:::STE::S::::D:S::SD:SDGSDGND::DGS
NP4140A         :T:H::::NV::A::::SM---:VA::::NG:::N:N:N:N:::::-::::::::--:::

consensus       -------GSSGPDGLMVIGYPESGIQLFRDYYSQSDGD--SEDILVPDGLRDGALPGQVG
#oth            11122122333.1311.1.1.1..1...1.1.24222121332.1.1..121131.13.1
HQ2969A         :::EMSS:::::E:VV:::::::::::::::::::::-::::E:::::::::::M:::::
HVO_2798        :::::::---::E::V:::::::::::::::::A:::-::::E::::::M:S:SM:::::
Hbo2530         :::::::---::E::V:::::::::::::::::::::-::::S:::::::::::M:::::
rrnAC0830       ::::::::PES::V:::V:::Q::V:::K:F:ADYGD:::AA::::T:::Q::E::SN::
hla1167         DGSDGSD:::A::AV::V:F::::::::::F::GFAS:VPEL::I:::::I:SD:::E:D
NP4140A         :::::::VAQT::SV::V:F:Q::::::::::GEFAD:Y:DV::I:::::I:SD:::D:D

consensus       NDMANVTGTAPAAGGPGQDAFNQLFEDEYG-EAPGVFTSQAYDAVAVQILANAAAGENDG
#oth            11.3..2..1.1.2..2212.233122.1212211...112..12.232.1131....2.
HQ2969A         :E::::::::::::::S:E:::S::Q::::::S:::::::S::S::I:::::::::::::
HVO_2798        ::::::::::::::::N::T:::::::::::A::::::::T::S::I:L:S:::::::S:
Hbo2530         ::::::::::::::::N:E::::::Q:::N:A::::::::S::S::LL::::::::::S:
rrnAC0830       D::S::R::::S:A:::V:T:TEQ:TS:FDY:EA::::::::::T:::::::IL::::::
hla1167         :::N::I::::S:::::AEF:TSAY:E::D:T::::::A:::::M::E:::AT:::::N:
NP4140A         :::D::I::E:::D:::A:F:ADSY:::::::::S::::H::::M::SV::AV:::::::

consensus       EAIRDQMRRVANPGGEEFGPDNLPEAVEAAAAGDDINYQGASSAVNFDENGDPASAAYAI
#oth            3.21121122...3.3221.3212111.11.1.1313.2....111.111..212.1.31
HQ2969A         T:V::::::I:::E:TTVT::::I:G:::::N:E:V::::::::T:::::::::::::::
HVO_2798        P::K:::::M:::D:MTV:::::V:GI::::N:E::D::::::S::::::::::E:::S:
Hbo2530         P:LKE::::I:::::D:Y::EKFV:::::::N::::::::::::T::N:K::::::::::
rrnAC0830       Q:V::H::V:::::::SY::SE::A::::::::EN:Q:E:::::::::::::M:::Q:QV
hla1167         :::::RV:T:::::::::::E:::::::TV::::PVH:V::::S::::A:::I:T:::DV
NP4140A         :::::R:AT::::N::::::AE::::::TV::::S::::::::S:D::::::IV::::D:

consensus       WEFQ---DGGTSTVDTQNF-AGENPEGDGPAADSGPGGSD--REASVGILLPETGDLASL
#oth            32.2122324343232231221222222233223212.3.2211332.1.1......121
HQ2969A         :::E::::::::Q:NV::::E:A::::S:S::::::::T:::::V::::::::::::::V
HVO_2798        :::D:AENNA::S:E::S::::::SD::::S:::::::::::::M:::::::::::::AV
Hbo2530         :::EGTDSDS:A:QEV::::E::::::S::S:::::::::::::I::::::::::::::V
rrnAC0830       FG::::DG::VD:LS:VD:S::S----:I:QPEPNGS:::SG:TIKF:V:M::::::GP:
hla1167         QD:::::::EIV:L::LE::GN:LS:E:LN:TAAD:V:I:GEF::QI:V:M::::::G::
NP4140A         VD:::::G:QLEV::SLELE:::----I:DVTAED:V:V::EF::M::V:M::::::GP:

consensus       GAPIRDAAQLPAMQVNDANPAGLSVNAQVEDTQTSPSAGISAANSLVSAGYPSVCGPASS
#oth            .3.1111.11114.2121212232112221....21211212121.12..11212.3.2.
HQ2969A         :Q:MIQ::::::::::E:::::I:::::T::::::::::V::GE::I:::V:::::T:::
HVO_2798        :::MIQ:::I:V::::::::::::::::I::::::::S:V:::Q::::::V:::::S:::
Hbo2530         :::MIQ:::I:VK:::N::::::T::::I::::::::::T:::QA:::::V:G:::S:::
rrnAC0830       :R::::G:L:::L:L-EGE-VDFEFDY::G::::QAQ:::D::::::::::::IT:A:::
hla1167         :G::::G:L:A:I:::::D-LNVT::TR::::::D:Q::::G::A::D:::GA:V:::A:
NP4140A         :G::::G:L:A:T:I:::D-LNV::DTS::::::D:T:A::S:E:::N::::A:V:::G:

consensus       GVNVPVSQQVFIPNEVVGCSPSSTALSVSNLEDNDYIFRTAPSDFLQGRVMAQVMAERLE
#oth            321311142132223211211211223223121222211121112111312121343212
HQ2969A         :::::T:::::::::::::::::::::::::D:D::::::::::::::::::::::::::
HVO_2798        :::::::K:A:::::I:::::::::::::::::::F::::::::::::::::::::::::
Hbo2530         :::::::::A:::::::::::::::::::::::::F:::::::::::::::::::S::::
rrnAC0830       ETSIQ:ARN:L:DSG::::::A::SPTITD::::::M:::P:::A:::Q:L:::GVGE:G
hla1167         N::LQ:AD::--------------------------------------------------
NP4140A         DQ:F:::TE:YV::S:::I::A:::PG:TE:D:DG:::::::::A:::P:::E:VMD::G

consensus       ASSVSTLYVNNDYGQQLSERFANVFEDE-DGEVYNQVAFNIGQSSYSSVIETALSG--N
#oth            33332112212311121343243313342212133222124332112142332234111
HQ2969A         V::::::F::::::::::D::TS::TE:Y::::VET:G::K:A:::::A::::::::::
HVO_2798        V::::::::::::::::::::S:::S:SF:::::::::::::E:::::::::::::PD:
Hbo2530         ::T::::F::::::::::N:::::::EQF:::::H:T:::::E::::::::::::APD:
rrnAC0830       :ETA:::::::S:::A:Q:A::GA::A::G:TIV:::G:EQQ::::T:E:NS:MNQ::-
hla1167         ----------------------------:--S:LHKA:------------------::-
NP4140A         HDNTA:::L:DE:::A:EASYV:G:::L:G:::FQ::S:EPE:P::::QWAEV:DT::-