Home |  Text search
6 genomes BUD1611 6 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2587

HVO_2973

Hbo1557

- -

hla0604

NP1828A

HQ1039A

Pairwise sequence scores
Consensus score530 NP1828A HQ1039A hla0604 rrnAC2587 Hbo1557 HVO_2973
229NP1828A 531 143 168 190 145 173
305HQ1039A 143 579 182 249 182 274
283hla0604 168 182 1070 204 155 238
373rrnAC2587 190 249 204 562 233 276
278Hbo1557 145 182 155 233 426 221
414HVO_2973 173 274 238 276 221 523

147 symbols
consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
NP1828A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HQ1039A         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
hla0604         VKPFHGASKKAVGARSGRTETGRGTIACPRCGFKTLGRLRTRERPMTDQEARAREARTQE
rrnAC2587       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo1557         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
HVO_2973        ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -------MADKNTEACGRCSMSTVVDAVDDEEG------RDPFGDDRIEVDESEIRAVS-
#oth            11111123544531311112213..1134244441113342.1313...23244313211
NP1828A         ::::::::GT:E:::::::GV:S:::T:EE:GER:::SATN::EGE:::IA:::A:S:LR
HQ1039A         ::::::MKT:D:::S:::::::A::::SI:TTDH:::::NS::::N:::::DETL:K:::
hla0604         ARVQEAHSQEVPA::::::::T:::G::SGDRSAAERTE::::AGE::::E::S::RI::
rrnAC2587       :::::::-MA:D::::::::::V::::::EN::E:::KPH:::::::::::QQD:ER:::
Hbo1557         :::::::-------------:::::::A::G::::::::SN::DGG:::LSDR:V::I::
HVO_2973        ::::::::::STR:G:::::IT:::::TA::S-:::::::::L::::::L::AAL::A::

consensus       PGAWLGRLSARLDAAARRFVYG-R---
#oth            12223331331214325.22222.111
NP1828A         HEVFIRKVT:::NRVVL:LT:S:::::
HQ1039A         :::::ST:TTK::SF:W::LDN::DTK
hla0604         ::GI:SD:KE:F::IG::LT:::::::
rrnAC2587       :EV:M::::T:I:E:VS:Y:W::::::
Hbo1557         :A::VA::AS:I:D::T:::::S::::
HVO_2973        ::::::::::::::::E:::::D::::